Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03790 and RBAM_023760
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:06
# Commandline: needle
# -asequence dna-align/BSNT_03790___dnaJ.1.9828.seq
# -bsequence dna-align/RBAM_023760___dnaJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03790___dnaJ-RBAM_023760___dnaJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03790___dnaJ-RBAM_023760___dnaJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03790___dnaJ
# 2: RBAM_023760___dnaJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1132
# Identity: 955/1132 (84.4%)
# Similarity: 955/1132 (84.4%)
# Gaps: 8/1132 ( 0.7%)
# Score: 4076.0
#
#
#=======================================
BSNT_03790___ 1 ATGAGTAAGCGTGATTACTATGAAGTGCTGGGAGTAAGTAAGAGCGCTTC 50
|||||||||||||||||||||||||||||.||.|||||||||||||||||
RBAM_023760__ 1 ATGAGTAAGCGTGATTACTATGAAGTGCTTGGGGTAAGTAAGAGCGCTTC 50
BSNT_03790___ 51 AAAGGATGAAATTAAAAAAGCTTATCGGAAGCTGTCAAAAAAATATCATC 100
||||||||||||.||||||||.|||||||||||.||||||||||||||||
RBAM_023760__ 51 AAAGGATGAAATCAAAAAAGCCTATCGGAAGCTTTCAAAAAAATATCATC 100
BSNT_03790___ 101 CTGATATTAACAAAGAAGCCGGATCAGATGAAAAATTTAAAGAGGTAAAA 150
|||||||.||.||||||.|||||.|||||||||||||.||||||||||||
RBAM_023760__ 101 CTGATATCAATAAAGAATCCGGAGCAGATGAAAAATTCAAAGAGGTAAAA 150
BSNT_03790___ 151 GAAGCGTACGAAACGCTGTCAGATGACCAAAAACGTGCGCATTACGATCA 200
||||||||||||.||||.|||||.|||||||||||.||.||.||.||.||
RBAM_023760__ 151 GAAGCGTACGAAGCGCTCTCAGACGACCAAAAACGCGCTCAATATGACCA 200
BSNT_03790___ 201 ATTTGGTCACACTGATCCTAACCAAGGCTTCGGCGGCGGAGGTTTT---- 246
|||.||.||.||.||.||||||||.||.||||||||||| |||
RBAM_023760__ 201 ATTCGGCCATACAGACCCTAACCAGGGATTCGGCGGCGG----TTTCGGA 246
BSNT_03790___ 247 GGCGGCGGCGATTTCGGCGGTTTTGGTTTCGATGATATTTTCTCAAGTAT 296
||||||||.||.||||||||.||.|||||||||||.||.||||||||.||
RBAM_023760__ 247 GGCGGCGGAGACTTCGGCGGCTTCGGTTTCGATGACATCTTCTCAAGCAT 296
BSNT_03790___ 297 TTTCGGCGGAGGCACAAGACGGAGAGATCCAAATGCTCCGCGCCAGGGTG 346
.|||||.||.|||||.|||||..|.||.||.|||||.|||||.||.||.|
RBAM_023760__ 297 CTTCGGAGGCGGCACGAGACGCCGTGACCCGAATGCGCCGCGGCAAGGCG 346
BSNT_03790___ 347 CTGATTTACAGTATACGATGACCCTGTCGTTTGAGGATGCGGCTTTCGGT 396
|.|||.|.||||||||.|||||||||||.|||||.||.|||||||||||.
RBAM_023760__ 347 CGGATCTGCAGTATACAATGACCCTGTCATTTGAAGACGCGGCTTTCGGG 396
BSNT_03790___ 397 AAAGAAACAACCATCGAAATTCCCCGCGAGGAAACGTGCGAAACATGTAA 446
||||||||.|.|||.||||||||.|||||.||.|..||||||||||||||
RBAM_023760__ 397 AAAGAAACGATCATTGAAATTCCGCGCGAAGAGAATTGCGAAACATGTAA 446
BSNT_03790___ 447 AGGCTCAGGTGCGAAACCTGGAACAAATCCAGAAACATGCTCCCACTGCG 496
|||.||.||.|||||.||.||||||||.||.||.||.|||||.|||||||
RBAM_023760__ 447 AGGGTCTGGCGCGAAGCCGGGAACAAAGCCGGATACGTGCTCGCACTGCG 496
BSNT_03790___ 497 GAGGCTCCGGCCAGTTAAACGTGGAGCAAAATACACCGTTTGGAAAAGTC 546
||||.||.||||||.|.|||||.||.||.||.||.||||||||.|||||.
RBAM_023760__ 497 GAGGTTCTGGCCAGCTGAACGTCGAACAGAACACGCCGTTTGGCAAAGTG 546
BSNT_03790___ 547 GTTAACAGACGGGTCTGCCACCACTGTGAAGGTACAGGCAAAATCATTAA 596
||||||.||.|.||||||||||||||||||||.|||||.||||||||.||
RBAM_023760__ 547 GTTAACCGAAGAGTCTGCCACCACTGTGAAGGAACAGGAAAAATCATCAA 596
BSNT_03790___ 597 AAACAAATGTGCGGACTGCGGCGGCAAAGGAAAAATCAAAAAACGCAAGA 646
||||||.|||.|.|||||||||||||..||.|||.|.||||||||.||.|
RBAM_023760__ 597 AAACAAGTGTTCTGACTGCGGCGGCACGGGCAAAGTGAAAAAACGGAAAA 646
BSNT_03790___ 647 AAATCAATGTGACAATTCCAGCCGGTGTAGATGACGGGCAGCAGCTTCGT 696
||||||||||.||.|||||.||||||||.||||||||.||||||||.||.
RBAM_023760__ 647 AAATCAATGTCACGATTCCTGCCGGTGTGGATGACGGACAGCAGCTGCGC 696
BSNT_03790___ 697 CTATCGGGACAGGGTGAACCAGGAATAAACGGCGGCCCTGCTGGGGATTT 746
.|..||||.||.||||||||.||..|||||||.||.||.||.||.|||.|
RBAM_023760__ 697 GTTCCGGGCCAAGGTGAACCGGGCGTAAACGGAGGGCCGGCGGGAGATCT 746
BSNT_03790___ 747 ATTTGTCGTGTTCCATGTACGCGCACACGAGTTCTTCGAGCGTGACGGCG 796
.||||||||.||||||||.|||||.|||||||||||.|||||.|||||.|
RBAM_023760__ 747 GTTTGTCGTATTCCATGTGCGCGCCCACGAGTTCTTTGAGCGCGACGGAG 796
BSNT_03790___ 797 ATGATATTTACTGTGAAATGCCGTTAACGTTTGCTCAGGCTGCTCTTGGA 846
|.||||||||.||.||||||||||||||||||||.||.||.||.||.|||
RBAM_023760__ 797 ACGATATTTATTGCGAAATGCCGTTAACGTTTGCCCAAGCGGCACTCGGA 846
BSNT_03790___ 847 GATGAGGTAGAAGTGCCGACGCTGCATGGAAAAGTGAAATTGAAAATTCC 896
||.||.||.||||||||||||||.||.||||||||||||||||||||.||
RBAM_023760__ 847 GACGAAGTGGAAGTGCCGACGCTTCACGGAAAAGTGAAATTGAAAATACC 896
BSNT_03790___ 897 GGCCGGTACACAAACAGGAACGAAATTTAGATTAAGAGGCAAAGGCGTTC 946
.|||||.|||||||||||.||||||||.||||||||||||||||||||||
RBAM_023760__ 897 TGCCGGCACACAAACAGGCACGAAATTCAGATTAAGAGGCAAAGGCGTTC 946
BSNT_03790___ 947 AAAATGTCAGAGGCTATGGACAGGGTGACCAGCATATCGTCGTCCGCGTC 996
|.||.|||.|.|||||.|||||.||.||||||||.||.||||||||||||
RBAM_023760__ 947 AGAACGTCCGGGGCTACGGACAAGGCGACCAGCACATTGTCGTCCGCGTC 996
BSNT_03790___ 997 GTTACGCCGACAAATCTGACTGATAAACAAAAAGACATTATCCGCGAATT 1046
||.||.|||||.||||||||.||.||||||||||||||.||||||||.||
RBAM_023760__ 997 GTCACACCGACGAATCTGACAGACAAACAAAAAGACATCATCCGCGAGTT 1046
BSNT_03790___ 1047 TGCCGAAGTCAGCGGAAACCTGCCTGACGAACAGGAAATGAGTTTCTTTG 1096
.||.||||||||||||||||||||.||.|||||.||||||||||||||||
RBAM_023760__ 1047 CGCTGAAGTCAGCGGAAACCTGCCGGATGAACAAGAAATGAGTTTCTTTG 1096
BSNT_03790___ 1097 ACAAGGTAAAACGCGCGTTTAAAGGTGATTAA 1128
||||.|||||||||||.||||||||.||.|||
RBAM_023760__ 1097 ACAAAGTAAAACGCGCATTTAAAGGCGAGTAA 1128
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