Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03787 and RBAM_023730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:06
# Commandline: needle
# -asequence dna-align/BSNT_03787___yqeV.1.9828.seq
# -bsequence dna-align/RBAM_023730___yqeV.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03787___yqeV-RBAM_023730___yqeV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03787___yqeV-RBAM_023730___yqeV.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03787___yqeV
# 2: RBAM_023730___yqeV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1361
# Identity: 1123/1361 (82.5%)
# Similarity: 1123/1361 (82.5%)
# Gaps: 10/1361 ( 0.7%)
# Score: 4641.0
#
#
#=======================================
BSNT_03787___ 1 ATGGCAACTGTTGCTTTCCATACGCTTGGCTGTAAAGTCAACCATTATGA 50
|||||||||||||||||.|||||.||||||||.||.||||||||||||||
RBAM_023730__ 1 ATGGCAACTGTTGCTTTTCATACCCTTGGCTGCAAGGTCAACCATTATGA 50
BSNT_03787___ 51 AACAGAAGCAATCTGGCAGCTTTTCAAAGAAGCGGGCTATGAAAGAAGAG 100
|||||||||||||||||||||.||.|||||.|||||.||||||.|||.||
RBAM_023730__ 51 AACAGAAGCAATCTGGCAGCTGTTTAAAGATGCGGGTTATGAACGAAAAG 100
BSNT_03787___ 101 ACTTTGAACAAACAGCTGATGTATATGTCATTAATACATGTACGGTTACA 150
|.||.|||||.|||||.|||||||||||||||||||||||||||||.|||
RBAM_023730__ 101 AATTCGAACAGACAGCAGATGTATATGTCATTAATACATGTACGGTAACA 150
BSNT_03787___ 151 AATACGGGAGATAAAAAAAGCCGCCAAGTGATCAGACGCGCCATTCGTCA 200
||.||||||||||||||||||||.|||||.||||||||.||.||.||.||
RBAM_023730__ 151 AACACGGGAGATAAAAAAAGCCGTCAAGTCATCAGACGGGCGATCCGCCA 200
BSNT_03787___ 201 AAATCCTGACGGTGTCATCTGTGTCACAGGCTGCTACGCGCAAACCTCAC 250
||||||||||||.||||||||.||.|||||.|||||.|||||||||||.|
RBAM_023730__ 201 AAATCCTGACGGCGTCATCTGCGTAACAGGGTGCTATGCGCAAACCTCTC 250
BSNT_03787___ 251 CTGCTGAGATTATGGCGATCCCCGGTGTCGACATTGTAGTTGGAACACAG 300
|.||.||.||||||||.|||||.|||||.|||||.||.||.||.||.|||
RBAM_023730__ 251 CGGCGGAAATTATGGCCATCCCGGGTGTTGACATCGTCGTCGGCACGCAG 300
BSNT_03787___ 301 GACCGTGAAAAAATGCTTGGCTACATTGACCAATACCGAGAAGAACGCCA 350
||.||||||||||||||.||.||||||||.||.|||.|.|||||.|||||
RBAM_023730__ 301 GATCGTGAAAAAATGCTCGGTTACATTGAGCAGTACAGGGAAGAGCGCCA 350
BSNT_03787___ 351 GCCGATTAATGGCGTCAGCAACATCATGAAAGCAAGAGTATATGAAGAGC 400
||||||.||.||||||.||||.||.|||||||||.|.||.|.||||||||
RBAM_023730__ 351 GCCGATCAACGGCGTCGGCAATATTATGAAAGCACGCGTGTTTGAAGAGC 400
BSNT_03787___ 401 TTGATGTGCCTGCTTTCACGGACCGCACAAGAGCGTCATTAAAAATACAG 450
|.|||||.||.|||||.||.|||||||||||||||||.||||||||.||.
RBAM_023730__ 401 TGGATGTTCCCGCTTTTACTGACCGCACAAGAGCGTCGTTAAAAATCCAA 450
BSNT_03787___ 451 GAGGGCTGCAATAATTTCTGCACATTCTGTATCATTCCGTGGGCGCGCGG 500
|||||||||||.||.|||||.||.|||||.||.||.||.|||||||||||
RBAM_023730__ 451 GAGGGCTGCAACAACTTCTGTACGTTCTGCATTATCCCTTGGGCGCGCGG 500
BSNT_03787___ 501 CCTGCTCCGCTCCCGCGATCCTGAAGAAGTCATTAAACAAGCGCAGCAGC 550
||||||.||.|||||||||||||||||||||||||||||.||||||||||
RBAM_023730__ 501 CCTGCTTCGTTCCCGCGATCCTGAAGAAGTCATTAAACAGGCGCAGCAGC 550
BSNT_03787___ 551 TTGTTGATGCCGGATATAAGGAAATTGTTCTTACGGGTATTCATACAGGC 600
|.||.||||||||.|||||.|||||.||.||.|||||.||||||||.|||
RBAM_023730__ 551 TGGTGGATGCCGGCTATAAAGAAATCGTCCTGACGGGGATTCATACGGGC 600
BSNT_03787___ 601 GGCTACGGCGAAGATATGAAAGATTACAACTTCGCGAAGCTTTTGAGCGA 650
||||||||||||||||||||||||||.||.|||||.||||||.|..||||
RBAM_023730__ 601 GGCTACGGCGAAGATATGAAAGATTATAATTTCGCCAAGCTTCTCCGCGA 650
BSNT_03787___ 651 ATTAGACACCCGTGTGGAAGGCGTGAAACGGATCAGAATTTCTTCCATCG 700
..|.||.||.|||||.|||||..||||.||||||||||||||.||.||.|
RBAM_023730__ 651 GCTGGATACGCGTGTAGAAGGACTGAAGCGGATCAGAATTTCATCTATTG 700
BSNT_03787___ 701 AAGCCAGCCAAATCACTGACGAAGTGATCGAGGTCTTAGACCGC-TCAGA 749
||||.||||||||||||||.||||||||.||.||..|.|| .|| ||.||
RBAM_023730__ 701 AAGCAAGCCAAATCACTGATGAAGTGATTGAAGTGCTGGA-TGCGTCTGA 749
BSNT_03787___ 750 TAAGATAGTGAATCATCTGCATATTCCTATCCAATCCGGATCAAACACAG 799
|||.||.||...|||.||.|||||.||.||.||.||.|||||||||||.|
RBAM_023730__ 750 TAAAATCGTCCGTCACCTTCATATCCCGATTCAGTCAGGATCAAACACCG 799
BSNT_03787___ 800 TGCTTAAACGAATGAGACGCAAATATACAATGGAATTCTTTGCAGACCGT 849
|.||.|||||.|||||||||||||||||.||||||||.||.||.||||||
RBAM_023730__ 800 TTCTGAAACGGATGAGACGCAAATATACGATGGAATTTTTCGCGGACCGT 849
BSNT_03787___ 850 TTAAATAAATTGAAAAAAGCACTGCCAGGCTTAGCTGTTACTTCTGATGT 899
||||||||..|||||.||||.|||||.||..|.||.||.||.||||||||
RBAM_023730__ 850 TTAAATAAGCTGAAAGAAGCGCTGCCGGGTCTGGCCGTCACATCTGATGT 899
BSNT_03787___ 900 CATCGTCGGATTCCCTGGAGAAACAGAAGAAGAATTTATGGAAACCTATA 949
|||||||||.|||||.||||||||.|||||||||||||||||||| |||
RBAM_023730__ 900 CATCGTCGGTTTCCCGGGAGAAACGGAAGAAGAATTTATGGAAAC--ATA 947
BSNT_03787___ 950 AC--TTTATTAAAGAACATAAATTCTCTGAACTGCATGTTTTCCCTTACA 997
.| ||.||||||||||||||.||.||.||.||.||.||.||||||||||
RBAM_023730__ 948 CCGGTTCATTAAAGAACATAAGTTTTCAGAGCTTCACGTATTCCCTTACA 997
BSNT_03787___ 998 GTAAACGTACAGGAACACCAGCTGCGCGAATGGAAGACCAAGTGGATGAA 1047
|.|||||.||.||||||||.||.||..|||||||||||||.||.||.||.
RBAM_023730__ 998 GCAAACGCACCGGAACACCTGCGGCCAGAATGGAAGACCAGGTTGACGAG 1047
BSNT_03787___ 1048 AACGTGAAAAACGAACGTGTGCACCGCCTGATTGCTCTTTCTGACCAGCT 1097
|||||||||||||||||.|||||....|||||.||.||.|||||||||||
RBAM_023730__ 1048 AACGTGAAAAACGAACGGGTGCATAAGCTGATCGCGCTGTCTGACCAGCT 1097
BSNT_03787___ 1098 TGCAAAAGAATACGCTTCTCAGTATGAAAATGAAGTGCTTGAGATTATCC 1147
|||||||||||||||.||..|.||||||...||.||.||.||.||.||.|
RBAM_023730__ 1098 TGCAAAAGAATACGCCTCCGATTATGAAGGAGAGGTTCTGGAAATCATTC 1147
BSNT_03787___ 1148 CTGAGGAAGCGTTTAAGGAAACAGAAGAAGAAAATATGTTTGTCGGTTAC 1197
|.||.||.||||||||.||..|.||.||.||....|||||.|||||.||.
RBAM_023730__ 1148 CGGAAGAGGCGTTTAAAGAGTCTGATGAGGAGGGCATGTTCGTCGGCTAT 1197
BSNT_03787___ 1198 ACAGACAATTATATGAAGGTTGTTTTCAAAGGTACGGAAGATATGATCGG 1247
||.||||||||.|||||.||.||.||||||||.|||||||||.|.|||||
RBAM_023730__ 1198 ACGGACAATTACATGAAAGTCGTCTTCAAAGGCACGGAAGATGTAATCGG 1247
BSNT_03787___ 1248 CAAAATCGTAAAAGTCAAAATCCTAAAAGCAGGTTATCCTTACAACGAAG 1297
||||.|.||.|||||||||||.|.||||||.||.|||||.||.|||||||
RBAM_023730__ 1248 CAAACTTGTCAAAGTCAAAATTCAAAAAGCGGGCTATCCGTATAACGAAG 1297
BSNT_03787___ 1298 GACAGTTTGTCCGTGTGGTTGAGGATGAAATAA--CTGAACACATGCGTT 1345
||||.||.|||||.||.||||||||||||||.| |.|| |||||||..
RBAM_023730__ 1298 GACAATTCGTCCGCGTCGTTGAGGATGAAATGACCCGGA--ACATGCGCA 1345
BSNT_03787___ 1346 TGTCTTCTTAA 1356
|||||||.|||
RBAM_023730__ 1346 TGTCTTCATAA 1356
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