Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03785 and RBAM_023710
See
Amino acid alignment /
Visit
BSNT_03785 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:06
# Commandline: needle
# -asequence dna-align/BSNT_03785___rpsU.1.9828.seq
# -bsequence dna-align/RBAM_023710___rpsU.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03785___rpsU-RBAM_023710___rpsU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03785___rpsU-RBAM_023710___rpsU.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03785___rpsU
# 2: RBAM_023710___rpsU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 174
# Identity: 172/174 (98.9%)
# Similarity: 172/174 (98.9%)
# Gaps: 0/174 ( 0.0%)
# Score: 852.0
#
#
#=======================================
BSNT_03785___ 1 ATGTCAAAAACGGTCGTTAGAAAAAACGAATCGCTTGAAGATGCTCTTCG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_023710__ 1 ATGTCAAAAACGGTCGTTAGAAAAAACGAATCGCTTGAAGATGCTCTTCG 50
BSNT_03785___ 51 TCGCTTCAAACGCAGTGTATCAAAGACAGGTACTTTGCAAGAAGCAAGAA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_023710__ 51 TCGCTTCAAACGCAGTGTATCAAAGACAGGTACTTTGCAAGAAGCAAGAA 100
BSNT_03785___ 101 AGCGTGAATTTTATGAAAAACCTAGCGTAAAGCGCAAGAAAAAGTCTGAA 150
||||.|||||||||||||||||||||||||||||||||||||||||.|||
RBAM_023710__ 101 AGCGCGAATTTTATGAAAAACCTAGCGTAAAGCGCAAGAAAAAGTCAGAA 150
BSNT_03785___ 151 GCTGCTAGAAAACGCAAATTCTAA 174
||||||||||||||||||||||||
RBAM_023710__ 151 GCTGCTAGAAAACGCAAATTCTAA 174
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.