Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03775 and RBAM_023620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:04
# Commandline: needle
# -asequence dna-align/BSNT_03775___yqfG.1.9828.seq
# -bsequence dna-align/RBAM_023620___yqfG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03775___yqfG-RBAM_023620___yqfG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03775___yqfG-RBAM_023620___yqfG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03775___yqfG
# 2: RBAM_023620___yqfG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 483
# Identity: 380/483 (78.7%)
# Similarity: 380/483 (78.7%)
# Gaps: 18/483 ( 3.7%)
# Score: 1475.0
#
#
#=======================================
BSNT_03775___ 1 ATGAGTTTACTGATTGATATCGTTGATGAAACAGGA--AGCGTCTCAGAA 48
|||||||||||.||.|||||.||||||||||| || ||||||||||..
RBAM_023620__ 1 ATGAGTTTACTCATAGATATTGTTGATGAAAC--GAACAGCGTCTCAGCT 48
BSNT_03775___ 49 GA-GCTGCTCAAAGAAGTAGAAAATCTGCTTCAATTTGCCGCTGAGCGTG 97
|| || ||||.|||||||.||.||.|||||||||||.||.||.||....|
RBAM_023620__ 49 GATGC-GCTCCAAGAAGTGGAGAAGCTGCTTCAATTCGCGGCGGAAAAAG 97
BSNT_03775___ 98 AAGGCGTTCAAGACCAGGCTGAAGTTTCTGTCACGATTGTTTCCAATGAT 147
||||||||||.||||||||||||||.||.|||||||||||..|.|||||.
RBAM_023620__ 98 AAGGCGTTCAGGACCAGGCTGAAGTATCGGTCACGATTGTGACAAATGAG 147
BSNT_03775___ 148 GACATACATCAG----ATTAACAAAGAATACCGGGGAAAGGATGCTCCGA 193
| |.||||| ||.||||.|||.|||||||||||.||..||||||
RBAM_023620__ 148 G----AAATCAGAGAAATCAACAGAGACTACCGGGGAAAAGACACTCCGA 193
BSNT_03775___ 194 CAGATGTCATCTCATTTGCTCTTGAAGAAGAGGGAGAAGGCGAGATCGAA 243
|.||.|||||.||.|||||.|||||||||||.||.||||.||||.|.|||
RBAM_023620__ 194 CTGACGTCATTTCGTTTGCGCTTGAAGAAGAAGGCGAAGACGAGGTTGAA 243
BSNT_03775___ 244 ATCGTGGGCGCCGAAATGCCTCCGGTTTTAGGTGATATTATCATCAGTGC 293
|||||.||||||||.|||||.||.||||||||.||||||||||||||.||
RBAM_023620__ 244 ATCGTAGGCGCCGACATGCCGCCTGTTTTAGGAGATATTATCATCAGCGC 293
BSNT_03775___ 294 CGATCGCACAAGAGAGCAGGCAGAGGAGTATAATCATTCTTTTAAAAGAG 343
.||..|.||.|.|||||||||.||.|||||....|||||.||||..||||
RBAM_023620__ 294 TGACAGAACGAAAGAGCAGGCGGAAGAGTACGGCCATTCATTTATGAGAG 343
BSNT_03775___ 344 AGCTCGGATTTCTAGCTGTACACGGATTTCTGCACCTTT--TAGGATATG 391
|||||||.|||||.||.||.|||||.|||.|||| ||| |.||.||||
RBAM_023620__ 344 AGCTCGGTTTTCTGGCCGTGCACGGCTTTTTGCA--TTTGCTTGGCTATG 391
BSNT_03775___ 392 ACCATATGACGAAAGAGGAAGAAGAGGAGATGTTTACTAAGCAAAAGGAA 441
|.||.|||||.|||||.|||||.||.||.||||||.|.|||||||||||.
RBAM_023620__ 392 ATCACATGACAAAAGAAGAAGAGGAAGAAATGTTTTCAAAGCAAAAGGAT 441
BSNT_03775___ 442 TTGCTGGACGCTTATGGACTCAAAAGATCATAG 474
||||||||.|..||||||||||..||||||||.
RBAM_023620__ 442 TTGCTGGATGAGTATGGACTCACGAGATCATAA 474
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