Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03774 and RBAM_023610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:04
# Commandline: needle
# -asequence dna-align/BSNT_03774___dgkA.1.9828.seq
# -bsequence dna-align/RBAM_023610___dgkA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03774___dgkA-RBAM_023610___dgkA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03774___dgkA-RBAM_023610___dgkA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03774___dgkA
# 2: RBAM_023610___dgkA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 389
# Identity: 283/389 (72.8%)
# Similarity: 283/389 (72.8%)
# Gaps: 25/389 ( 6.4%)
# Score: 1006.0
#
#
#=======================================
BSNT_03774___ 1 ------ATGGACTCAAAAGATCATAGAAATGAGCTGAATC-GATTCTTCA 43
|||||||||..||||||||.|||.||| ||.|.| |.|||.|.|
RBAM_023610__ 1 ATGAGTATGGACTCACGAGATCATAAAAACGAG-TGGAGCAGGTTCCTGA 49
BSNT_03774___ 44 AAAGCTTCGTGCATGCAGGCCGGGGCATCTGGGAAACAGTGCGGACGGAG 93
|.|||||.||.||||||.|..||||.||||||.||||.|.||||.|.|||
RBAM_023610__ 50 AGAGCTTTGTCCATGCATGGAGGGGAATCTGGAAAACGGCGCGGTCAGAG 99
BSNT_03774___ 94 CGGAATTTCCAATTTCATGCCGCAGCCGCCTGCGCTGTTCTCATTTGCGG 143
||||||||.|||||||||....|.||.||||||||.|||.||.|||||||
RBAM_023610__ 100 CGGAATTTTCAATTTCATATTACCGCGGCCTGCGCCGTTATCGTTTGCGG 149
BSNT_03774___ 144 CTT-----CCTTGTAGAGCTCAGCATGATTGAGTGGATGATTATATTCCT 188
.|| ||..|..||||.|||| .||.||.|..|.||.||..||.|
RBAM_023610__ 150 TTTTCTCACCGGGCTGAGCACAGC-CGAATGGGCCGTTGTTTTGATGC-- 196
BSNT_03774___ 189 TTTGATAGGCGGTATGTTTTCGCTT--GAGCTTTTAAATACAGCCATTGA 236
||||.||.||.|||.|| |||| |||||.||||||||.||.||.||
RBAM_023610__ 197 --TGATCGGAGGAATGCTT--GCTTTGGAGCTGTTAAATACCGCGATAGA 242
BSNT_03774___ 237 ACATACGGTGGATTTAATAACTGACAAACATCACCCTCTTGCTAAAGCGG 286
.|||...|||||||||.|.||.||..|..|||||||.||.||.|||||||
RBAM_023610__ 243 GCATGTTGTGGATTTAGTTACCGATCAGTATCACCCGCTCGCAAAAGCGG 292
BSNT_03774___ 287 CCAAGGACGCTGCCGCCGGGGCTGTTTGCGTTTTTGCCGTGATTTCGTGT 336
|.||||||||.||||||||.||.||||||||.|||||||||||.||||||
RBAM_023610__ 293 CAAAGGACGCGGCCGCCGGAGCCGTTTGCGTCTTTGCCGTGATATCGTGT 342
BSNT_03774___ 337 ATCATTGGTTTACTTATTTTTTTGCCAAAG--CTGTAA- 372
||||||||||||||.||.||.|||||.||| .|||.|
RBAM_023610__ 343 ATCATTGGTTTACTCATCTTCTTGCCGAAGATATGTTAG 381
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