Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03772 and RBAM_023600
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:04
# Commandline: needle
# -asequence dna-align/BSNT_03772___cdd.1.9828.seq
# -bsequence dna-align/RBAM_023600___cdd.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03772___cdd-RBAM_023600___cdd.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03772___cdd-RBAM_023600___cdd.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03772___cdd
# 2: RBAM_023600___cdd
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 412
# Identity: 347/412 (84.2%)
# Similarity: 347/412 (84.2%)
# Gaps: 2/412 ( 0.5%)
# Score: 1463.0
#
#
#=======================================
BSNT_03772___ 1 ATGAACAGACAAGAATTAATAACAGAAGCTTTAAAAGCGCGTGATATGGC 50
|||||||||||||||||.||..|||||||.|||||||||||.||.|..||
RBAM_023600__ 1 ATGAACAGACAAGAATTGATTGCAGAAGCATTAAAAGCGCGGGACACAGC 50
BSNT_03772___ 51 ATATACGCCGTATTCCAAATTCCA-AGTAGGAGCCGCTCTTCTTACCAAG 99
.|||..|||||||| ||||||.|| |||.||||||||||||||||||||.
RBAM_023600__ 51 GTATGTGCCGTATT-CAAATTTCAGAGTGGGAGCCGCTCTTCTTACCAAA 99
BSNT_03772___ 100 GATGGAAAAGTGTACAGAGGCTGCAACATTGAGAACGCGGCATACAGCAT 149
||.||||||||||||||||||||||||||.||.||.||||||||||||||
RBAM_023600__ 100 GACGGAAAAGTGTACAGAGGCTGCAACATCGAAAATGCGGCATACAGCAT 149
BSNT_03772___ 150 GTGCAATTGCGCCGAGCGTACTGCTTTATTTAAAGCTGTTTCTGAAGGGG 199
||||||.||.||.||.||.||.||..||||.|||||||||||.||.||||
RBAM_023600__ 150 GTGCAACTGTGCTGAACGCACGGCGATATTCAAAGCTGTTTCCGAGGGGG 199
BSNT_03772___ 200 ATACAGAGTTTCAGATGCTGGCCGTTGCGGCTGACACCCCTGGACCGGTA 249
||||.||.|||..||||||.|||||.||.||.||.||.||.||||||||.
RBAM_023600__ 200 ATACGGAATTTGCGATGCTCGCCGTGGCTGCGGATACTCCGGGACCGGTT 249
BSNT_03772___ 250 TCTCCGTGCGGAGCCTGCCGCCAGGTGATTTCTGAGCTTTGCACAAAAGA 299
||.|||||||||||||||.|.||.||.|||||.|||||.|||.||||.||
RBAM_023600__ 250 TCGCCGTGCGGAGCCTGCAGACAAGTAATTTCCGAGCTGTGCTCAAAGGA 299
BSNT_03772___ 300 CGTTATTGTCGTACTAACTAATTTACAAGGACAAATAAAAGAAATGACTG 349
..|..||||..|.||.||.||.||||||||||||||||||||||||||||
RBAM_023600__ 300 TATGCTTGTTATTCTGACCAACTTACAAGGACAAATAAAAGAAATGACTG 349
BSNT_03772___ 350 TGGAAGATTTATTGCCAGGCGCATTTTCATCGGAGGATTTACATGACGAA 399
.||||||.|||||.||||||||||||||||||||||||||||||||||||
RBAM_023600__ 350 CGGAAGAATTATTACCAGGCGCATTTTCATCGGAGGATTTACATGACGAA 399
BSNT_03772___ 400 CGAAAGCTTTAA 411
||||||||||||
RBAM_023600__ 400 CGAAAGCTTTAA 411
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