Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03771 and RBAM_023590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:04
# Commandline: needle
# -asequence dna-align/BSNT_03771___era.1.9828.seq
# -bsequence dna-align/RBAM_023590___era.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03771___era-RBAM_023590___era.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03771___era-RBAM_023590___era.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03771___era
# 2: RBAM_023590___era
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 908
# Identity: 751/908 (82.7%)
# Similarity: 751/908 (82.7%)
# Gaps: 4/908 ( 0.4%)
# Score: 3103.0
#
#
#=======================================
BSNT_03771___ 1 ATGACGAACGAAAGCTTTAAATCAGGATTTGTATCCATTATTGGAAGACC 50
|||||||||||||||||||||||||||||||||||.||.||.|||||.||
RBAM_023590__ 1 ATGACGAACGAAAGCTTTAAATCAGGATTTGTATCTATCATCGGAAGGCC 50
BSNT_03771___ 51 AAACGTAGGAAAATCTACATTTTTGAACAGAGTCATTGGACAAAAAATCG 100
.||.||||||||.|||||.|||||.|||||.|||||.||.|||||.||||
RBAM_023590__ 51 GAATGTAGGAAAGTCTACCTTTTTAAACAGGGTCATCGGTCAAAAGATCG 100
BSNT_03771___ 101 CGATCATGAGCGATAAGCCCCAAACGACGAGAAACAAGGTGCAAGGAGTA 150
|.|||||||||||.||.|||||.|||||.|||||.||.||.|||||.||.
RBAM_023590__ 101 CCATCATGAGCGACAAACCCCAGACGACAAGAAATAAAGTCCAAGGGGTG 150
BSNT_03771___ 151 CTGACGACAGGCACATCACAAACCATTTTTATTGACACACCAGGGATTCA 200
|||||.||.|||||.||.||.||||||||||||||.|||||.||.|||||
RBAM_023590__ 151 CTGACAACCGGCACGTCGCAGACCATTTTTATTGATACACCGGGCATTCA 200
BSNT_03771___ 201 TAAACCTAAGCATAAGCTTGGGGACTTTATGATGAAAGTGGCGCAAAATA 250
.|||||.|||||.||||||||.|||||||||||||||||||||||.||||
RBAM_023590__ 201 CAAACCAAAGCACAAGCTTGGCGACTTTATGATGAAAGTGGCGCAGAATA 250
BSNT_03771___ 251 CATTAAAAGAAGTCGATTTGATCTTGTTTATGATCAATGCTGAGGAAGGC 300
|..|.||||||||.||.|||.|.||.||||||||.||.||.||.|||||.
RBAM_023590__ 251 CGCTGAAAGAAGTTGACTTGGTGTTATTTATGATTAACGCCGAAGAAGGG 300
BSNT_03771___ 301 TACGGGAAGGGCGACGAATTCATCATTGAGAAATTGCAGAC-GATGTCTA 349
|||||.||.||||||||.||.|||||||| |||...|.||| ||.|||||
RBAM_023590__ 301 TACGGAAAAGGCGACGAGTTTATCATTGA-AAAGCTCGGACAGACGTCTA 349
BSNT_03771___ 350 CGCCTGTATTCTTAATCGTAAACAAAATCGATAAAATTCATCCCGACCAA 399
|.||.||.||..|.|||||.||||||||.|||||.||.|||||.|||||.
RBAM_023590__ 350 CACCGGTCTTTCTGATCGTTAACAAAATTGATAAGATCCATCCTGACCAG 399
BSNT_03771___ 400 TTGCTTCTGCTAATTGACGAATACCGCAAACGTTATCCTTTTAAGGAAAT 449
.|||||||..|||||||.||.|||||.|..||.|||||.|||||||||||
RBAM_023590__ 400 CTGCTTCTTTTAATTGATGAGTACCGTACGCGCTATCCGTTTAAGGAAAT 449
BSNT_03771___ 450 TGTTCCGATTTCTGCTTTAGAAGGAAATAACATCGAAACCTTGCTCGCTC 499
.||.|||||.||.|||||.|||||.||.|||.||||||||.|.|||||.|
RBAM_023590__ 450 CGTGCCGATCTCAGCTTTGGAAGGGAACAACGTCGAAACCCTTCTCGCGC 499
BSNT_03771___ 500 AGATTGAAGCGTATTTGCCGGAAGGGCCGCAATTCTATCCGAGTGACCAG 549
||||||||||||||||.|||||||||||.||.|||||||||||.||.|||
RBAM_023590__ 500 AGATTGAAGCGTATTTACCGGAAGGGCCTCAGTTCTATCCGAGCGATCAG 549
BSNT_03771___ 550 GTAACTGACCACCCTGAACGATTTATCATTTCTGAATTAATCAGGGAAAA 599
||.||||||||.||.||.||.||.||.|||||||||.|.|||||||||||
RBAM_023590__ 550 GTGACTGACCATCCCGAGCGGTTCATTATTTCTGAACTGATCAGGGAAAA 599
BSNT_03771___ 600 GGTGCTGCATTTGACGAGAGAAGAAATCCCGCACAGCATTGCGGTGGCCA 649
||||||.|||.||||.||.||||||.|.|||||||||||.||.||.||.|
RBAM_023590__ 600 GGTGCTCCATCTGACAAGGGAAGAAGTGCCGCACAGCATCGCTGTCGCTA 649
BSNT_03771___ 650 TCGAATCCATCAAAGGGCAGGACAACGGTTCTGTGCACGTAGCGGCAACG 699
||||.|||||.|||||||||||.|||||.||.||.||.||.||.||.||.
RBAM_023590__ 650 TCGAGTCCATTAAAGGGCAGGAAAACGGCTCCGTCCATGTCGCCGCCACC 699
BSNT_03771___ 700 ATTGTGGTCGAGCGGGATTCCCAGAAAGGCATCGTGATCGGTAAAAAAGG 749
||||||||||||||||||||.||.|||||||||||.|||||.||||||||
RBAM_023590__ 700 ATTGTGGTCGAGCGGGATTCTCAAAAAGGCATCGTCATCGGCAAAAAAGG 749
BSNT_03771___ 750 AAGC-CTTCTAAAAGAGGTTGGAAAAAGAGCGAGAGCGGATATTGAAGCA 798
||| |||||.|||||.||.||.|||||||||.|.||.|||||||||||.
RBAM_023590__ 750 -AGCGCTTCTGAAAGAAGTCGGCAAAAGAGCGCGGGCTGATATTGAAGCT 798
BSNT_03771___ 799 CTGTTGGGCTCCCGTGTCTACCTTGAATTGTGGGTGAAAGTGCAGAAAGA 848
||.||||||||.||.||.|||||.|||||.||||||||.||||||||.||
RBAM_023590__ 799 CTTTTGGGCTCACGCGTTTACCTGGAATTATGGGTGAAGGTGCAGAAGGA 848
BSNT_03771___ 849 CTGGCGTAATAAAATGTCCCAGCTTCGCGATTTTGGCTTTAAAGAGGACG 898
||||||.|||||||||||.|||||.||.|||||.|||||.||||||||.|
RBAM_023590__ 849 CTGGCGGAATAAAATGTCTCAGCTGCGTGATTTCGGCTTCAAAGAGGATG 898
BSNT_03771___ 899 AATATTAA 906
||||||||
RBAM_023590__ 899 AATATTAA 906
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