Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03763 and RBAM_023540

See Amino acid alignment / Visit BSNT_03763 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:03
# Commandline: needle
#    -asequence dna-align/BSNT_03763___yqfL.1.9828.seq
#    -bsequence dna-align/RBAM_023540___yqfL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03763___yqfL-RBAM_023540___yqfL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03763___yqfL-RBAM_023540___yqfL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03763___yqfL
# 2: RBAM_023540___yqfL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 814
# Identity:     666/814 (81.8%)
# Similarity:   666/814 (81.8%)
# Gaps:           2/814 ( 0.2%)
# Score: 2726.0
# 
#
#=======================================

BSNT_03763___      1 ATGAATAACCGCATCATCTATGTTGTATCGGATTCCGTCGGTGAAACGGC     50
                     |||.|.||.||||||||.|||||.|||||.||.||.|||||.|||||.||
RBAM_023540__      1 ATGGACAATCGCATCATTTATGTAGTATCAGACTCAGTCGGAGAAACCGC     50

BSNT_03763___     51 TGAATTGGTAGTAAAAGCAGCACTCAGCCAATTTAACGGATCGGCGGATG    100
                     .|||.|.||.||||||||..|.||||||||.||||||||.||.||.||||
RBAM_023540__     51 CGAACTCGTTGTAAAAGCCTCGCTCAGCCAGTTTAACGGCTCAGCCGATG    100

BSNT_03763___    101 ATACTCATGTAAGAAGAATTCCTTATGTTGAAGATATAGGCACTATCAAT    150
                     ||||.|||.|.||||||||.||||||||.||||||||.|||||.||.|||
RBAM_023540__    101 ATACGCATATCAGAAGAATACCTTATGTGGAAGATATCGGCACCATTAAT    150

BSNT_03763___    151 GAAGTGATTTCACTTGCAAAGGCAGACGGCGGCATTATCTGTTTTACACT    200
                     |||||..|.||.||.||.||.||.||||||||||||||.||||||||.||
RBAM_023540__    151 GAAGTCGTGTCTCTCGCCAAAGCGGACGGCGGCATTATTTGTTTTACGCT    200

BSNT_03763___    201 CGTGGTGCCGGAAATCAGAGAATATTTGATAGCCGAAGCGGAAAAAGCAA    250
                     |||.||.||.|||||..|..||||..||.|.|...|||||||||||||.|
RBAM_023540__    201 CGTTGTTCCTGAAATGCGCAAATACCTGGTTGAACAAGCGGAAAAAGCGA    250

BSNT_03763___    251 ATGTTTTATATTATGATATTATCGGCCCGTTGATTGATAAAATGGAAACA    300
                     ||||..|.|||||.|||||||||||.|||.|.||.||||||||||||.|.
RBAM_023540__    251 ATGTGCTGTATTACGATATTATCGGTCCGCTCATCGATAAAATGGAATCG    300

BSNT_03763___    301 GCCTACGGTTTAACAGCGAAATATGAACCGGGGCGGGTGCGCCAGCTTGA    350
                     ||.||||||.|.||.||.||||||||||||||.||.||.|||||||||||
RBAM_023540__    301 GCTTACGGTCTGACCGCCAAATATGAACCGGGCCGCGTCCGCCAGCTTGA    350

BSNT_03763___    351 TGAAGATTATTTCAAAAAAGTGGAGGCCATCGAGTTTGCAGTTAAATACG    400
                     ||||||||||||||||||.||.|||||.|||||||||||.||.|||||.|
RBAM_023540__    351 TGAAGATTATTTCAAAAAGGTCGAGGCGATCGAGTTTGCCGTCAAATATG    400

BSNT_03763___    401 ATGATGGACGTGATCCAAGAGGGATTTTAAAAGCTGATATCGTTTTGATC    450
                     |.|||||..|.|||||||||||.|||||||||||.||||||.|..||.||
RBAM_023540__    401 ACGATGGCAGGGATCCAAGAGGCATTTTAAAAGCCGATATCATCCTGCTC    450

BSNT_03763___    451 GGCGTGTCAAGAACGTCTAAAACACCGCTGTCTCAATATCTCGCACACAA    500
                     ||.||.||.||||||||||||||.||..|.||.||||||||.||.||.||
RBAM_023540__    451 GGAGTATCCAGAACGTCTAAAACCCCATTATCACAATATCTTGCCCATAA    500

BSNT_03763___    501 ACGCCTGAAGGTTGCCAATGTTCCGATTGTACCGGAGGTTGATCCGCCGG    550
                     .||.|||||.||.||||||||.|||||.||.||.|||||.||||||||||
RBAM_023540__    501 GCGTCTGAAAGTGGCCAATGTGCCGATCGTTCCTGAGGTCGATCCGCCGG    550

BSNT_03763___    551 AAGAACTCTTTAACGTTGATCCGAAAAAATGCATCGGTTTAAAGATTAGC    600
                     |||||||.||.|.||||||||||||||||||||||||.|||||.||.|||
RBAM_023540__    551 AAGAACTGTTCAGCGTTGATCCGAAAAAATGCATCGGCTTAAAAATCAGC    600

BSNT_03763___    601 CCTGATAAACTGAATCATATCAGAAAAGAACGCTTAAAATCACTCGGGCT    650
                     ||||||||||||||.|||||..||||||||||.||||||||.||| ||||
RBAM_023540__    601 CCTGATAAACTGAACCATATACGAAAAGAACGGTTAAAATCTCTC-GGCT    649

BSNT_03763___    651 T-AATGATAAAGCGATTTATGCAAATATCAACAGAATCAAAGAGGAACTC    699
                     | |||||.|||||.|||||.||.||||||||||||||.|||||.||.||.
RBAM_023540__    650 TAAATGACAAAGCCATTTACGCCAATATCAACAGAATTAAAGAAGAGCTG    699

BSNT_03763___    700 GAGTATTTCGAAAAGATTGTGGATCGGATCGGCTGCCAAGTTGTTGATGT    749
                     ||||||||.||.||.||.|||||.|||||||||||||||||.|||||.||
RBAM_023540__    700 GAGTATTTTGAGAAAATCGTGGACCGGATCGGCTGCCAAGTCGTTGACGT    749

BSNT_03763___    750 TTCAAATAAAGCGGTTGAGGAAACAGCAAATATTATCCATCATCTCAAAA    799
                     |||.|||||||||||.|||||||||||.||.||.||.|||||.|||||||
RBAM_023540__    750 TTCGAATAAAGCGGTCGAGGAAACAGCGAACATCATTCATCACCTCAAAA    799

BSNT_03763___    800 CAAAAAACATATAA    813
                     ||||...|..||||
RBAM_023540__    800 CAAAGGGCCGATAA    813


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