Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03761 and RBAM_023530

See Amino acid alignment / Visit BSNT_03761 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:03
# Commandline: needle
#    -asequence dna-align/BSNT_03761.1.9828.seq
#    -bsequence dna-align/RBAM_023530___yqxD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03761-RBAM_023530___yqxD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03761-RBAM_023530___yqxD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03761
# 2: RBAM_023530___yqxD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 514
# Identity:     402/514 (78.2%)
# Similarity:   402/514 (78.2%)
# Gaps:          26/514 ( 5.1%)
# Score: 1563.5
# 
#
#=======================================

BSNT_03761         1 ATGGAGGGATGGAGAATTACTCTTCTTAATGAACAAGAAAAGACGATTTT     50
                     |||||||||||||||||||.||||||.||||||.||||||||||||||||
RBAM_023530__      1 ATGGAGGGATGGAGAATTAGTCTTCTAAATGAAAAAGAAAAGACGATTTT     50

BSNT_03761        51 TGTCGATGCTGATGCTTGTCCGGTAAAAGATGAAATTTTACAAACAGCAT    100
                     |||||||||.||.||.||.||.||||||||.|||||..|.|..|..||||
RBAM_023530__     51 TGTCGATGCAGACGCATGCCCCGTAAAAGAGGAAATAATGCTCATTGCAT    100

BSNT_03761       101 C-CGAGTATGAAGTTCAAGTTCTTTTTGTCGCTTCATTTGAACATTATCA    149
                     | |.|||..| .||||..|||.||||.|||||.|||||||||||.||.||
RBAM_023530__    101 CGCAAGTCAG-CGTTCGGGTTATTTTCGTCGCATCATTTGAACACTACCA    149

BSNT_03761       150 GCTTTCCAGAAGCAATGAAGAAAAATGGAAGTAT--GTTGATCCTCATAA    197
                     |||||||||||||||.||.||.||.|||  ||||  ||||||||||||||
RBAM_023530__    150 GCTTTCCAGAAGCAAAGACGAGAACTGG--GTATACGTTGATCCTCATAA    197

BSNT_03761       198 AGAAGCTGCTGATTTATATATCGCAAATCACGTGAAACCGGGAGATATTG    247
                     ||||||.||.||.||||||||||||||.||.||||.|.|||||||..|.|
RBAM_023530__    198 AGAAGCGGCAGACTTATATATCGCAAACCATGTGAGATCGGGAGACGTCG    247

BSNT_03761       248 TTGTGACGCAGGACATCGGATTAGCATCTCTGCTGTTGAACAGAAATGTC    297
                     |.||.||||||||.|||||.|||||.|||||..||.|||||||||||.|.
RBAM_023530__    248 TAGTCACGCAGGATATCGGTTTAGCCTCTCTTTTGCTGAACAGAAATATT    297

BSNT_03761       298 TCCGTTATGTCGGAAAGAGGTCGTCTTTACAAAGAAGACACGATTGATTT    347
                     .||||..|.||||||||.||.|||..|||.|..||||||||||||||.||
RBAM_023530__    298 GCCGTCTTATCGGAAAGGGGCCGTTCTTATACTGAAGACACGATTGACTT    347

BSNT_03761       348 TGCCCTAGA-GGGCCGTCATTTTTCCGGCAAACAAAGAAGAAAAGGCGTA    396
                     .||.|| || |.||||||||.|.||.||||||...|||||||..|||.|.
RBAM_023530__    348 CGCTCT-GATGAGCCGTCATATGTCAGGCAAAATGAGAAGAAGCGGCATT    396

BSNT_03761       397 TATGCCAAAGGGCCTAAAAAATTGAATAAAGAAGATCGAGAA-CGATTTA    445
                     .||.|||||||.|||||||||||.|||||||||||||| ||| ||||||.
RBAM_023530__    397 CATTCCAAAGGACCTAAAAAATTAAATAAAGAAGATCG-GAATCGATTTG    445

BSNT_03761       446 TTACACTGCTGCAAAAAATCCTGTCGAACGATGAAGGGATTTTGCA---C    492
                     ||||.|||||..||||||||||||||||.|||||||||||||  ||   |
RBAM_023530__    446 TTACCCTGCTTAAAAAAATCCTGTCGAATGATGAAGGGATTT--CAAATC    493

BSNT_03761       493 TAA-----------    495
                     .||           
RBAM_023530__    494 AAAACATCGAATAA    507


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