Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03760 and RBAM_023520
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:03
# Commandline: needle
# -asequence dna-align/BSNT_03760___dnaG.1.9828.seq
# -bsequence dna-align/RBAM_023520___dnaG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03760___dnaG-RBAM_023520___dnaG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03760___dnaG-RBAM_023520___dnaG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03760___dnaG
# 2: RBAM_023520___dnaG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1830
# Identity: 1420/1830 (77.6%)
# Similarity: 1420/1830 (77.6%)
# Gaps: 36/1830 ( 2.0%)
# Score: 5415.0
#
#
#=======================================
BSNT_03760___ 1 ATGGGAAATCGGATACCAGATGAAATTGTGGATCAGGTGCAAAAGTCGGC 50
||||||||.||.||||||||||||.|.||..||||||||||..||||.||
RBAM_023520__ 1 ATGGGAAACCGCATACCAGATGAAGTAGTTAATCAGGTGCAGCAGTCAGC 50
BSNT_03760___ 51 AGATATCGTTGAAGTCATAGGTGATTATGTTCAATTAAAGAAGCAAGGCC 100
|||.||.|||||||||||||||||||||||.|||||.||.||||||||||
RBAM_023520__ 51 AGACATTGTTGAAGTCATAGGTGATTATGTCCAATTGAAAAAGCAAGGCC 100
BSNT_03760___ 101 GAAACTACTTTGGACTCTGTCCTTTTCATGGAGAAAGCACACCTTCGTTT 150
|.|||||||||||.||||||||.|||||.||.||||.|||.||.||||||
RBAM_023520__ 101 GCAACTACTTTGGGCTCTGTCCGTTTCACGGGGAAAACACGCCCTCGTTT 150
BSNT_03760___ 151 TCCGTATCGCCCGACAAACAGATTTTTCATTGCTTTGGCTGCGGAGCGGG 200
|||||.||...|||.||.|||||.|||||||||||.||.|||||.|||||
RBAM_023520__ 151 TCCGTCTCCAGCGATAAGCAGATCTTTCATTGCTTCGGATGCGGTGCGGG 200
BSNT_03760___ 201 CGGCAATGTTTTCTCTTTTTTAAGGCAGATGGAAGGCTATTCTTTTGCCG 250
|||.||.|||||||||||.|||.|||||||||||||.|||||.|||.|.|
RBAM_023520__ 201 CGGGAACGTTTTCTCTTTCTTACGGCAGATGGAAGGTTATTCATTTACGG 250
BSNT_03760___ 251 AGTCGGTTTCTCACCTTGCTGACAAATACCAAATTGATTTTCCAGATGAT 300
|..|.||||||||||||||.||.|||||.||.||||||||.||.||||||
RBAM_023520__ 251 AAGCTGTTTCTCACCTTGCGGATAAATATCAGATTGATTTCCCTGATGAT 300
BSNT_03760___ 301 ATAACAGTCCATTCCGGAGCCCGGCCAGAGTCTTCTGGAGAACAAAAAAT 350
|||||..|.||.||.|.|.||.||||.||.|||||.|||||.||.||.||
RBAM_023520__ 301 ATAACGATTCACTCTGCATCCAGGCCGGAATCTTCCGGAGAGCAGAAGAT 350
BSNT_03760___ 351 GGCTGAGGCACATGAGCTCCTGAAGAAATTTTACCATCATTTGTTAATAA 400
|||.||.||.||.|||||.||||||||||||||||||||||||.||||||
RBAM_023520__ 351 GGCGGAAGCCCACGAGCTTCTGAAGAAATTTTACCATCATTTGCTAATAA 400
BSNT_03760___ 401 ATACAAAAGAAGGTCAAGAGGCACTGGATTATCTGCTTTCTAGGGGCTTT 450
|||||||.|||||.||.||.|||.|.|||||.||..|.||.|||||.|||
RBAM_023520__ 401 ATACAAAGGAAGGCCAGGAAGCATTAGATTACCTTTTATCAAGGGGTTTT 450
BSNT_03760___ 451 ACGAAAGAGCTGATTGATGAATTTCAGATTGGCTATGCTCTTGATTCTTG 500
|||||||||||.||.|||||.|||.|.||.|||||.||.||.|||||.||
RBAM_023520__ 451 ACGAAAGAGCTCATAGATGAGTTTGAAATCGGCTACGCGCTGGATTCCTG 500
BSNT_03760___ 501 GGACTTTATTACGAAATTCCTTG-TAAAGAGGGGATTTAGTGAGGCACAA 549
|||.||.||.|||||||| |||| .||||.|.||.|| |||||.|.||
RBAM_023520__ 501 GGATTTCATGACGAAATT-CTTGAAAAAGCGCGGTTT---TGAGGAAGAA 546
BSNT_03760___ 550 ---ATGGAAAAAGCGGGTCTCCTGATCAGACGCGAAGACGGAAGCGGATA 596
|||||||||||||||||.|||||||||.|.||||||||.|||||.||
RBAM_023520__ 547 CTGATGGAAAAAGCGGGTCTGCTGATCAGAAGGGAAGACGGCAGCGGGTA 596
BSNT_03760___ 597 TTTCGACCGCTTCAGAAACCGTGTCATGTTTCCGATCCATGATCATCACG 646
|||.|||||.|||||||||.|..|.||||||||.||.||||||||.||||
RBAM_023520__ 597 TTTTGACCGTTTCAGAAACAGAATTATGTTTCCCATTCATGATCACCACG 646
BSNT_03760___ 647 GGGCTGTTGTTGCTTTCTCAGGCAGGGCTCTTGGCAGCCAGCAGCCTAAG 696
|.||.||.|..|||||.|||||.|||||.||.||.|||||||||||.||.
RBAM_023520__ 647 GAGCCGTGGCGGCTTTTTCAGGAAGGGCGCTCGGAAGCCAGCAGCCGAAA 696
BSNT_03760___ 697 TATATGAACAGTCCTGAAACCCCGCTCTTTCATAAAAGTAAACTGCTTTA 746
|||||||||||.||.|||||.|||||.|||||||||..|||.|||||.||
RBAM_023520__ 697 TATATGAACAGCCCGGAAACGCCGCTGTTTCATAAATCTAAGCTGCTGTA 746
BSNT_03760___ 747 CAATTTTTATAAGGCCCGCCTTCATATCA-GAAAGCAGGAAAGAGCAGTC 795
.||.|||.|||||||.|||||.|..|||| ||||| ||||.|||||.||.
RBAM_023520__ 747 TAACTTTCATAAGGCGCGCCTGCCGATCAGGAAAG-AGGAGAGAGCCGTT 795
BSNT_03760___ 796 TTATTTGAAGGGTTTGCTGATGTCATATCGGCCGTAAGCTCGGGTGTAAA 845
.|.||||||||.||.|||||.||||||||.|||||.||||||||.|||||
RBAM_023520__ 796 CTGTTTGAAGGCTTCGCTGACGTCATATCCGCCGTCAGCTCGGGCGTAAA 845
BSNT_03760___ 846 AGAAAGCATAGCCACGATGGGAACGTCTCTTACAGATGATCATGTCAAGA 895
||||||.||.|||||.|||||.|||||.||.||.||.||.|||||.||.|
RBAM_023520__ 846 AGAAAGTATCGCCACAATGGGGACGTCGCTCACCGAAGAACATGTGAAAA 895
BSNT_03760___ 896 TCTTGAGAAGAAACGTCGAAGAAATCATTCTTTGCTATGACTCTGATAAA 945
||.|.||.|||||.||..|.||..|||||||.|||||.||.||.||||||
RBAM_023520__ 896 TCCTCAGGAGAAATGTTCAGGAGGTCATTCTCTGCTACGATTCGGATAAA 945
BSNT_03760___ 946 GCCGGTTATGAAGCCACCTTAAAAGCTTCGGAGCTTCTGCAAAAAAAAGG 995
|||||.||.|||||.||..|.|||||..|.|..||.||.||.||| |
RBAM_023520__ 946 GCCGGGTACGAAGCTACGCTGAAAGCGGCCGGCCTGCTCCAGAAA----G 991
BSNT_03760___ 996 C----TGCAAAGTCAGAGT-TGCAATGATTCCTGACGGATTGGACCCTGA 1040
| ||.||.||.||||| .|| |||.|.|||||||||.|.||.|||||
RBAM_023520__ 992 CCGATTGTAAGGTAAGAGTAAGC-ATGCTGCCTGACGGACTTGATCCTGA 1040
BSNT_03760___ 1041 TGATTACATCAAAAAATTC---GGCGGGGAAAAATTTAAAAACGACATTA 1087
||||||.||||.|| || |||||.||||||||....|.|||.||.|
RBAM_023520__ 1041 TGATTATATCAGAA---TCCGGGGCGGAGAAAAATTCCGGACCGATATCA 1087
BSNT_03760___ 1088 TTGACGCCAGTGTCACCGTAATGGCGTTCAAAATGCAATATTTCCGAAAA 1137
||||.||.||.||.||.||.|||||.||.||||||||.||||||||.|||
RBAM_023520__ 1088 TTGATGCAAGCGTTACGGTCATGGCTTTTAAAATGCAGTATTTCCGCAAA 1137
BSNT_03760___ 1138 GGAAAGAACCTGTCCGATGAAGGCGACCGACTAGCTTACATTAAAGACGT 1187
||.||.|||.|.||.||.|||||.|||||.||.||||||||.|||||.||
RBAM_023520__ 1138 GGGAAAAACTTATCTGACGAAGGAGACCGGCTCGCTTACATGAAAGAAGT 1187
BSNT_03760___ 1188 ACTGAAAGAAATCAGCACGCTTTCAGGGTCTCTAGAGCAGGAAGTCTATG 1237
.|||||||||||||||.|.|||||.|||||.||.|||||||||.|.||||
RBAM_023520__ 1188 GCTGAAAGAAATCAGCGCTCTTTCCGGGTCGCTTGAGCAGGAAATGTATG 1237
BSNT_03760___ 1238 TAAAGCAGCTTGCTTCAGAGTTTTCGCTTTCACAGGAGTCTTTAACTGAG 1287
|.||||||||.||.|||||.|||||.|||||....||.|||||.||.||.
RBAM_023520__ 1238 TGAAGCAGCTCGCCTCAGAATTTTCTCTTTCGGTAGAATCTTTGACGGAA 1287
BSNT_03760___ 1288 CAGCTGTCTGTTTTCAGCAAG-CAAAACAAACCTGCTGACAATAGCGGTG 1336
|||||.||..|.|.| ||.|| ||||||...||.|..|||||.|.||..|
RBAM_023520__ 1288 CAGCTTTCCATCTAC-GCCAGACAAAACGCCCCCGGCGACAAAAACGCCG 1336
BSNT_03760___ 1337 AAACAAAAACGCGGCGAGCGCATCTGACAACAAAAGC---AAGGCAAAAA 1383
||.|..|.||..||||.||.|...||||.|||||||| |.||| ..
RBAM_023520__ 1337 AACCGCAGACAAGGCGGGCCCGGGTGACGACAAAAGCGAAACGGC---GC 1383
BSNT_03760___ 1384 CGTTTGCGTCCGGCGTATGAAAATGCAGAAAGGCTGCTACTCGCTCACAT 1433
|||.|.|||||.||.|||||.||.||.|||||.||.||.||||||||.||
RBAM_023520__ 1384 CGTCTCCGTCCCGCCTATGAGAACGCGGAAAGACTTCTGCTCGCTCATAT 1433
BSNT_03760___ 1434 GCTTCGAGATCGGAGCGTCATCAAAAAAGTGATTGACCGGGTAGGGTTTC 1483
|||..||||.||.|.||||||.||.|||||||||||.||.||.||.|||.
RBAM_023520__ 1434 GCTGAGAGACCGAAACGTCATAAAGAAAGTGATTGAGCGTGTCGGCTTTG 1483
BSNT_03760___ 1484 AATTTAATATTGATGAGCACCGGGCATTAGCCGCCTATCTTTATGCTTTT 1533
|||||||.|||||.|..||.||.||..|.||.||.||.||.||.|||.||
RBAM_023520__ 1484 AATTTAACATTGACGGACATCGTGCGCTGGCAGCATACCTGTACGCTGTT 1533
BSNT_03760___ 1534 TATGAAGAGGGAGCCGAGCTGACGCCTCAGCATCTGATGGCCAGGGTGAC 1583
|||||||||||.||.||..|||||||.||||||||.|||||.||..||..
RBAM_023520__ 1534 TATGAAGAGGGCGCTGACATGACGCCGCAGCATCTTATGGCGAGAATGCA 1583
BSNT_03760___ 1584 GGATGATCATATAAGCCAGCT-CTTGTCTGATATATTAATGCTTCAGGTT 1632
||||||..|.||.|||||||| ||| ||.||||||...|||||.||.||.
RBAM_023520__ 1584 GGATGAGGAAATCAGCCAGCTGCTT-TCAGATATAGGGATGCTCCAAGTA 1632
BSNT_03760___ 1633 AATCAAGAGCTTAGTGAAGCCGAGTTATCAGATTATGTAAAAAAAGTGTT 1682
||..|.|||||....||.|||||||||||.|||||.||||||||||||||
RBAM_023520__ 1633 AACGAGGAGCTCTCAGAGGCCGAGTTATCCGATTACGTAAAAAAAGTGTT 1682
BSNT_03760___ 1683 GAATCAAAGAAATTGGTCAATGATAAAAGAAAAAGAGGCGGAAAGAGCCG 1732
|.||||..||||.||||||||||||||.||||||||.||.||||||||.|
RBAM_023520__ 1683 GGATCACCGAAAATGGTCAATGATAAAGGAAAAAGAAGCAGAAAGAGCGG 1732
BSNT_03760___ 1733 AAGCCGAAAGGCAAAAAGATTTTTTAAGAGCTGCTTCTCTGGCTCAAGAA 1782
|.||.||.|||||.|||||.||..|.|.||||||.|||||||||||||||
RBAM_023520__ 1733 ATGCGGAGAGGCAGAAAGACTTCGTGAAAGCTGCGTCTCTGGCTCAAGAA 1782
BSNT_03760___ 1783 ATCGTTACATTGAACCGATCTTTAAAATAA 1812
||.|||.|||||||||||||.|||||.|||
RBAM_023520__ 1783 ATTGTTGCATTGAACCGATCATTAAAGTAA 1812
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Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.