Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03745 and RBAM_023430

See Amino acid alignment / Visit BSNT_03745 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:02
# Commandline: needle
#    -asequence dna-align/BSNT_03745___yqfT.1.9828.seq
#    -bsequence dna-align/RBAM_023430___yqfT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03745___yqfT-RBAM_023430___yqfT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03745___yqfT-RBAM_023430___yqfT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03745___yqfT
# 2: RBAM_023430___yqfT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 256
# Identity:     194/256 (75.8%)
# Similarity:   194/256 (75.8%)
# Gaps:           2/256 ( 0.8%)
# Score: 710.0
# 
#
#=======================================

BSNT_03745___      1 ATGATTTTATTTCAAAGAATTATTTTACAGCGGCTTAATCAGGCTACTGC     50
                     |||||||||.|.||||||||||||||.||||||||.|||||.|..|||||
RBAM_023430__      1 ATGATTTTAATACAAAGAATTATTTTGCAGCGGCTCAATCAAGTCACTGC     50

BSNT_03745___     51 TGATGATTTGCTGAAGTACTCAAAACAATACGGAATCAGCTTAACAAGAT    100
                     .||.|||.|||||||.||.||.||.||||||||.||||||.|.||||||.
RBAM_023430__     51 GGACGATCTGCTGAAATATTCCAAGCAATACGGGATCAGCATTACAAGAA    100

BSNT_03745___    101 CGCAGGCAGTTGAAGTAGCGAACCTGTTATACGGGAAAAATGTAAACATC    150
                     ..||.||.|.|||.||||||...|||.|..||||.|||||..|.||.||.
RBAM_023430__    101 GTCAAGCGGCTGAGGTAGCGGCTCTGATGCACGGAAAAAACATCAATATT    150

BSNT_03745___    151 TTTAATG-AGAGTGAACGAATGCGGCTGCTGAAACAAGTAGAGACGATTA    199
                     |||.||| |.|| ||.||..||||.|||||||||.||||.||.|||||.|
RBAM_023430__    151 TTTGATGAACAG-GAGCGGCTGCGCCTGCTGAAAAAAGTGGAAACGATAA    199

BSNT_03745___    200 CATCGAAAGAAACAGCTCAAACAGTTAATGAACTATTCAAACAATTTACA    249
                     |.||.||||||||.||.|..|.||||.|.|||||.|||||.||||||.||
RBAM_023430__    200 CCTCAAAAGAAACGGCGCGGAAAGTTGACGAACTTTTCAATCAATTTTCA    249

BSNT_03745___    250 AGCTAA    255
                     .|.|||
RBAM_023430__    250 GGGTAA    255


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