Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03744 and RBAM_023420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:02
# Commandline: needle
# -asequence dna-align/BSNT_03744___yqfU.1.9828.seq
# -bsequence dna-align/RBAM_023420___yqfU.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03744___yqfU-RBAM_023420___yqfU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03744___yqfU-RBAM_023420___yqfU.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03744___yqfU
# 2: RBAM_023420___yqfU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 882
# Identity: 720/882 (81.6%)
# Similarity: 720/882 (81.6%)
# Gaps: 0/882 ( 0.0%)
# Score: 2952.0
#
#
#=======================================
BSNT_03744___ 1 ATGACCCCAACAAAACAACATAAGAAAGAAACATTTACCCATTTTATTTT 50
||||||||||..|||||.|||||.|.||||.|||||...||.|||||.||
RBAM_023420__ 1 ATGACCCCAAATAAACAGCATAAAAGAGAATCATTTTTACACTTTATCTT 50
BSNT_03744___ 51 CAGGGTCTTTATGATTCTGGTAGGAGCTGCATCTGCGGCTGTAAGTATTG 100
|||||||.|||||||||||.|.||.||.|..||.||.||.||||||||||
RBAM_023420__ 51 CAGGGTCATTATGATTCTGATCGGGGCGGGTTCAGCCGCCGTAAGTATTG 100
BSNT_03744___ 101 AATTATTTTTAATCCCCAATGATTTTATTGATGGCGGGATTATCGGTGTA 150
||||.|||.|..||||.|||.|||||||.||.||.||.|||||||||||.
RBAM_023420__ 101 AATTGTTTCTGGTCCCTAATAATTTTATCGACGGAGGCATTATCGGTGTT 150
BSNT_03744___ 151 TCACTTATTTTAGACCACCTCTTTATGTCAAACCCCTTTCTCAATTTCGC 200
|||.|.|||||||||||||||||||||||.||.|||.|.||||||||.||
RBAM_023420__ 151 TCATTAATTTTAGACCACCTCTTTATGTCCAATCCCCTCCTCAATTTTGC 200
BSNT_03744___ 201 TTTATTCGTTGTCATATTAAATATTCCTTTTATGATCTTCGGATATAAAT 250
.|||||||||||..||.|.||.|||||.||||||||.|||||||||||||
RBAM_023420__ 201 CTTATTCGTTGTGTTACTCAACATTCCATTTATGATTTTCGGATATAAAT 250
BSNT_03744___ 251 ATATCGGTAAGACCTTTCTAGTCTCTACGTTTATAGGGATTGTCGGACTT 300
|||||||.||.||.|||||..|||||||..||||.||.||.|||||..|.
RBAM_023420__ 251 ATATCGGAAAAACATTTCTCATCTCTACTGTTATCGGAATCGTCGGTTTA 300
BSNT_03744___ 301 GCCGTTATTGAATCCTCACTTCACCATGTAGAAGCCATTACAACCCAGCC 350
||..|.||||||||||||.|.||||||||.||.||||||||.||||||||
RBAM_023420__ 301 GCGCTGATTGAATCCTCATTGCACCATGTGGAGGCCATTACGACCCAGCC 350
BSNT_03744___ 351 TATTTTGGCTACTGTGTTCGGAGGTCTTTTACTCGGCTTTGGCGTCGGGC 400
|||||||||.||.||.|||||.||.|||||.|||||.||.||.||.||.|
RBAM_023420__ 351 TATTTTGGCGACGGTATTCGGCGGGCTTTTGCTCGGTTTCGGGGTAGGCC 400
BSNT_03744___ 401 TTGTTATTCGAAACGGAGGTTCAATGGATGGTACAGAAATTCTCGGTATT 450
||||.||.|||||||||||.||.|||||.|||||.|||||.||||||||.
RBAM_023420__ 401 TTGTCATCCGAAACGGAGGCTCGATGGACGGTACTGAAATCCTCGGTATC 450
BSNT_03744___ 451 TTGCTGACCAAAAAACTCCCGTTTTCTGTAGGTGAGTTCGTTATGTTCAT 500
.|.||.||.|||||.||.||.|||||.||.||.||.|||||||||.||||
RBAM_023420__ 451 CTTCTCACGAAAAAGCTGCCCTTTTCAGTCGGGGAATTCGTTATGCTCAT 500
BSNT_03744___ 501 CAATGTGTTCATTTTCATTTGGGCAGTTTTTGTGTTCGGTCCTGAGCAAG 550
|||||||||.||||||||||||||.|.|||||||||||||||.|||||.|
RBAM_023420__ 501 CAATGTGTTTATTTTCATTTGGGCCGGTTTTGTGTTCGGTCCGGAGCAGG 550
BSNT_03744___ 551 CGATGTACTCATTCATGACTTATTATATTGCGATGAAAACGATTGATGCT 600
|.|||||.||.||||||||||||||||||||.||||||||||||||.||.
RBAM_023420__ 551 CAATGTATTCTTTCATGACTTATTATATTGCCATGAAAACGATTGACGCC 600
BSNT_03744___ 601 GTGATCCAAGGGCTTGATGAAACAAAAGCTGTCATTATTGTGTCTGAGCA 650
||.|||||.||||||||||||||||||||.|||||||||||..|.|||||
RBAM_023420__ 601 GTCATCCAGGGGCTTGATGAAACAAAAGCGGTCATTATTGTTGCAGAGCA 650
BSNT_03744___ 651 GTATGATGAGATTTCCGACGCGATTTTGCACCGTCTCGGTCGGGGCACAA 700
.||||.||||||.||.||.||.||.||||||||.||.||.|||||.||.|
RBAM_023420__ 651 ATATGCTGAGATCTCAGATGCTATATTGCACCGGCTTGGGCGGGGAACCA 700
BSNT_03744___ 701 CGAAGCTGAAGGGGAAAGGCGGATATACGGACGAAGAAAAAGACGTAATT 750
|.||.||..||||||||||||||||||||||.|||...|||||.||.|||
RBAM_023420__ 701 CCAAACTTCAGGGGAAAGGCGGATATACGGATGAAACCAAAGAAGTCATT 750
BSNT_03744___ 751 TACGCGGTTGTCACAAGGCTGGAAGTGACAAAGCTCAAATCGATCGTGTT 800
||||||||.||.||||||||.||||||||.||..|.|||||.||.|||||
RBAM_023420__ 751 TACGCGGTCGTGACAAGGCTTGAAGTGACTAAATTGAAATCCATTGTGTT 800
BSNT_03744___ 801 TGAAGTTGATCAAAATGCATTCATAACAATTATGAATACTCATGAAACGA 850
||||.|||||.||||.||.||.||.||.||.||||||||.||||||||||
RBAM_023420__ 801 TGAAATTGATAAAAACGCCTTTATTACGATCATGAATACCCATGAAACGA 850
BSNT_03744___ 851 GAGGCGGAAAATTCAAAAACGCAATCCACTAG 882
|.|||||.||.|||||||.|||.||.||||||
RBAM_023420__ 851 GGGGCGGTAAGTTCAAAACCGCGATTCACTAG 882
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