Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03742 and RBAM_023410

See Amino acid alignment / Visit BSNT_03742 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:02
# Commandline: needle
#    -asequence dna-align/BSNT_03742___zur.1.9828.seq
#    -bsequence dna-align/RBAM_023410___zur.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03742___zur-RBAM_023410___zur.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03742___zur-RBAM_023410___zur.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03742___zur
# 2: RBAM_023410___zur
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 438
# Identity:     332/438 (75.8%)
# Similarity:   332/438 (75.8%)
# Gaps:          27/438 ( 6.2%)
# Score: 1332.0
# 
#
#=======================================

BSNT_03742___      1 ATGAACGTACAAGAAGCGCTGAACCTACTAAAAGAAAACGGATATAAATA     50
                     ||||||||||||||||||.|||||||.||.||||||||.||.||||||||
RBAM_023410__      1 ATGAACGTACAAGAAGCGTTGAACCTGCTGAAAGAAAAAGGGTATAAATA     50

BSNT_03742___     51 TACAAACAAACGGGAGGATATGCTGCAGCTTTTTGCTGATTCAGACAGAT    100
                     |||.|..||.||.||.||.|||||||||||||||||||||||.||.|.||
RBAM_023410__     51 TACGAGTAAGCGAGAAGACATGCTGCAGCTTTTTGCTGATTCTGATAAAT    100

BSNT_03742___    101 ATCTTACCGCTAAAAACGTACTGTCTGCACTGAATGATGATTATCCAGGC    150
                     ||||.|||||.||||||||.||..|.|||.|.|||||.||.|||||.||.
RBAM_023410__    101 ATCTGACCGCCAAAAACGTGCTTGCCGCATTAAATGACGACTATCCGGGT    150

BSNT_03742___    151 TTAAGCTTTGATACAATCTACAGAAATCTTTCTTTATATGAAGAACTTGG    200
                     .|.|||||||||||.||.||||||||||||||.||||||||||||||.||
RBAM_023410__    151 CTGAGCTTTGATACCATATACAGAAATCTTTCGTTATATGAAGAACTCGG    200

BSNT_03742___    201 GATTTTGGAAACAACTGAGCTGTCCGGTGAAAAGCTCTTCCGATTTAAGT    250
                     .|||||||||||.||.|||||.|||||.|||||.||.|||||.||||..|
RBAM_023410__    201 CATTTTGGAAACGACGGAGCTTTCCGGAGAAAAACTGTTCCGTTTTACAT    250

BSNT_03742___    251 GTTCATTCACCCATCACCACCATCATTTTATTTGTCTTGCCTGCGGCAAA    300
                     |.||.|..||||||||.||.||.||||||||.|||.|..|||||||.|||
RBAM_023410__    251 GCTCTTATACCCATCATCATCACCATTTTATCTGTTTAACCTGCGGGAAA    300

BSNT_03742___    301 ACAAAGGAAATTGAATCATGTCCGATGGACAAGCTTTGTGATGATTTGGA    350
                     ||.|||||||||||.||.|||||||||||.|||||....|||||||||||
RBAM_023410__    301 ACGAAGGAAATTGAGTCCTGTCCGATGGATAAGCTGCACGATGATTTGGA    350

BSNT_03742___    351 TGGCTATCAGGTCAGCGGGCATAAATTTGAGATTTATGGCACATGCCCTG    400
                     .||.|||.|..|||||||.|||||.|||||.|||||.|||||.||.||.|
RBAM_023410__    351 AGGGTATGAAATCAGCGGCCATAAGTTTGAAATTTACGGCACCTGTCCGG    400

BSNT_03742___    401 ATTGTACAGCGGAAAACCAAGAAAACACTACTGCGTAA    438
                     ..|     ||.||.||                      
RBAM_023410__    401 CGT-----GCCGATAA----------------------    411


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