Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03735 and RBAM_023350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:01
# Commandline: needle
# -asequence dna-align/BSNT_03735___yqgC.1.9828.seq
# -bsequence dna-align/RBAM_023350___yqgC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03735___yqgC-RBAM_023350___yqgC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03735___yqgC-RBAM_023350___yqgC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03735___yqgC
# 2: RBAM_023350___yqgC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 485
# Identity: 374/485 (77.1%)
# Similarity: 374/485 (77.1%)
# Gaps: 4/485 ( 0.8%)
# Score: 1421.0
#
#
#=======================================
BSNT_03735___ 1 ATGGATATGTTGTATTGGCTGTTGATTGCA--GCGGTTTTTATCATTGCC 48
|||..|.|.||||||||||||.|||| || ||.||.||..|||||||.
RBAM_023350__ 1 ATGAGTGTTTTGTATTGGCTGATGAT--CATTGCTGTCTTCGTCATTGCT 48
BSNT_03735___ 49 TTTATCGGGCTGGTGTATCCTGTTATTCCGAGCGTAGTATTTATTGTTGC 98
|||||||||||.||.|||||.||.|||||.|||||..|.||||||||.||
RBAM_023350__ 49 TTTATCGGGCTTGTATATCCGGTGATTCCAAGCGTTATTTTTATTGTGGC 98
BSNT_03735___ 99 CGGATTTGTATTGTACGGATTTTTATTTTCATTCAGTCCGTATTCTTATA 148
|||.|||.|..|.|||||.|||||.|||||.||||||||.||||||||..
RBAM_023350__ 99 CGGTTTTCTTCTCTACGGGTTTTTGTTTTCCTTCAGTCCTTATTCTTACC 148
BSNT_03735___ 149 TGTTCTGGCTTGTTGAGGCAGTTTTTGCCGCAGTATTATTTGCAGCAGAT 198
||||.|||||..|||||||.||.|||||.||.||.|||||.|||||.||.
RBAM_023350__ 149 TGTTTTGGCTCATTGAGGCGGTATTTGCGGCCGTTTTATTCGCAGCTGAC 198
BSNT_03735___ 199 TACGTGTCGAATCTGCTTGGAGTAAAAAGGTTCGGAGGAAGCAAAGCTGC 248
||.|||||.|||.|.|||||.||.|||||||.|||||||||||..||.||
RBAM_023350__ 199 TATGTGTCAAATTTACTTGGCGTTAAAAGGTACGGAGGAAGCAGGGCGGC 248
BSNT_03735___ 249 CATATGGGGAAGCACGATCGGTTTATTAATCGGGCCTTTTGTCATTCCGG 298
.||.|||||||||||||||||.|||||.||||||||.||.||.|||||.|
RBAM_023350__ 249 AATCTGGGGAAGCACGATCGGATTATTGATCGGGCCCTTCGTTATTCCCG 298
BSNT_03735___ 299 TTGCAGGGATCATATTGGGGCCGTTTATCGGGGCTGTTTGCGCAGAACTT 348
|.||.||.||.|||||.||.|||||||||||.|||.|.|||||.||..|.
RBAM_023350__ 299 TGGCGGGCATTATATTAGGCCCGTTTATCGGTGCTCTCTGCGCTGAGGTG 348
BSNT_03735___ 349 ATCGTCCATCAGAAGGACTTAAAGTCAGCGTTTAAAATTGGCCTCGGCTC 398
.|.||.|||||.|||||..|.|||||.|||...|||.|.||.||||||||
RBAM_023350__ 349 TTTGTTCATCAAAAGGATATCAAGTCCGCGGCAAAAGTGGGGCTCGGCTC 398
BSNT_03735___ 399 ACTCATTGGTTTTTTAACAGGGGTTATTGCAAAGGGCATCATACAGCTTT 448
..|.||.||.|||||||||.|.||....|||||.|||.||||.|||||.|
RBAM_023350__ 399 GTTAATCGGCTTTTTAACAAGCGTCGCGGCAAAAGGCGTCATTCAGCTCT 448
BSNT_03735___ 449 TGATGATCGGATACTTTTTATGGACGGTCCTATAA 483
|.|||||||||||.||.|||||||||||.||.||.
RBAM_023350__ 449 TTATGATCGGATATTTCTTATGGACGGTGCTTTAG 483
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