Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03730 and RBAM_023280
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:01
# Commandline: needle
# -asequence dna-align/BSNT_03730___pstC.1.9828.seq
# -bsequence dna-align/RBAM_023280___yqgH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03730___pstC-RBAM_023280___yqgH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03730___pstC-RBAM_023280___yqgH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03730___pstC
# 2: RBAM_023280___yqgH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 934
# Identity: 746/934 (79.9%)
# Similarity: 746/934 (79.9%)
# Gaps: 8/934 ( 0.9%)
# Score: 2949.0
#
#
#=======================================
BSNT_03730___ 1 ATGATAAACAATAGAGAAAATATGTCTGTGAGCGAGCGTTTAATCAGCTC 50
||||||||..|.||||||||...||||||.|||||.||.|||||.|||||
RBAM_023280__ 1 ATGATAAATCACAGAGAAAAAGAGTCTGTAAGCGAACGCTTAATAAGCTC 50
BSNT_03730___ 51 AAGGCAAAATCGGCAATTGGATGAAGTTCGGGGAAGAATGATTGTGACAG 100
||..|||||..|||||.||||||||||.||.|||||..||||||||.|.|
RBAM_023280__ 51 AAAACAAAACAGGCAAATGGATGAAGTCCGCGGAAGGGTGATTGTGTCTG 100
BSNT_03730___ 101 CATGTG-CGCTGATTATGATTGCGGCATCTGTTGCAATCACCATTTTCCT 149
..|||| ||| ||||||.|||||||||||.|..||.|||||.|||||.||
RBAM_023280__ 101 TGTGTGCCGC-GATTATCATTGCGGCATCAGCGGCGATCACAATTTTTCT 149
BSNT_03730___ 150 CGGCGTGAAGGGGCTGCAATCTTTTCTTGTAAATGGTGTAAGCCCAATTG 199
||||.|.||||||||||||||||||.|||||||||||||||||||.||||
RBAM_023280__ 150 CGGCATAAAGGGGCTGCAATCTTTTTTTGTAAATGGTGTAAGCCCGATTG 199
BSNT_03730___ 200 AATTCTTAACGAGCTTAAATTGGAATCCTA--CAGATAGTGATCCGAAAT 247
|.||||||||.||..|.|||||||||||.| |||..| .|.||..|.|
RBAM_023280__ 200 AGTTCTTAACAAGTCTGAATTGGAATCCAACCCAGGCA--AAACCTGAGT 247
BSNT_03730___ 248 ACGGAGTGCTGCCATTTATTTTTGGCTCATTTGCAGTAACGATTCTTTCT 297
.|||.|.||||||.||||||||.||.||||||||.||.|||.||||.||.
RBAM_023280__ 248 TCGGCGCGCTGCCTTTTATTTTCGGGTCATTTGCGGTCACGGTTCTGTCC 297
BSNT_03730___ 298 GCTCTAATCGCTGCGCCGCTTGGCATTGCAGGTGCGATTTTTATGACAGA 347
|||||.|||||.|||||.||.||.|||||.|||||..|.||||||||.||
RBAM_023280__ 298 GCTCTGATCGCAGCGCCCCTCGGTATTGCGGGTGCCGTGTTTATGACGGA 347
BSNT_03730___ 348 GATTGCCCCGAATTGGGGAAAGAAAGTGCTGCAGCCGGTGATTGAGCTTT 397
.|||||.||||.|||||||||.||.||||||||||||||.||||||||..
RBAM_023280__ 348 AATTGCGCCGACTTGGGGAAAAAAGGTGCTGCAGCCGGTAATTGAGCTGC 397
BSNT_03730___ 398 TAGTCGGTATTCCATCTGTTGTTTATGGATTCATAGGTCTTACAGTATTG 447
|.|||||.|||||.||.||.||||||||||||||||||||||||||||||
RBAM_023280__ 398 TTGTCGGCATTCCGTCCGTCGTTTATGGATTCATAGGTCTTACAGTATTG 447
BSNT_03730___ 448 GTGCCGTTTATCGCCCAGTTCAAATCGAGCGGAACAGGGCACAGTTTATT 497
||.||||||||||.|...||.|||||.||||||||.||.|||||..|..|
RBAM_023280__ 448 GTTCCGTTTATCGGCTCTTTTAAATCAAGCGGAACGGGTCACAGCCTTCT 497
BSNT_03730___ 498 GGCGGGAACGATTGTCCTTTCCGTCATGATTCTCCCGACGATCACATCGA 547
||||||.|||||.||.||.||.||.||||||||.|||||..|.|||||||
RBAM_023280__ 498 GGCGGGGACGATCGTACTCTCGGTAATGATTCTGCCGACTGTTACATCGA 547
BSNT_03730___ 548 TTTCTGCTGATGCAATGGCTTCTCTTCCGAAGAGTTTACGAGAGGGTTCT 597
||||.||||||||..|.||.||.||||||||...|.|.||.||.|||||.
RBAM_023280__ 548 TTTCCGCTGATGCGCTTGCGTCACTTCCGAAACATCTTCGCGACGGTTCA 597
BSNT_03730___ 598 TACGCGCTTGGTGCGACAAGATGGCAGACGATCAGAAAAGTACTTGTGCC 647
|||||||||||||||||.||.||||||||.||||||||.||.|||.|.||
RBAM_023280__ 598 TACGCGCTTGGTGCGACGAGGTGGCAGACAATCAGAAAGGTGCTTATCCC 647
BSNT_03730___ 648 TGCAGCTTTTCCAACATTGATGACAGCTGTTGTGTTAGGCATGGCTCGGG 697
.||.||.|||||.||||||.||||.|||||.|||.|.||.|||||..|.|
RBAM_023280__ 648 GGCGGCGTTTCCGACATTGCTGACCGCTGTCGTGCTCGGGATGGCAAGAG 697
BSNT_03730___ 698 CGTTCGGTGAAGCTTTGGCTGTTCAGATGGTCATTGGAAATACAAGAG-T 746
|||||||.|||||..|.||.||.||||||||.||.|||||||||| || |
RBAM_023280__ 698 CGTTCGGAGAAGCACTCGCCGTACAGATGGTTATCGGAAATACAA-AGCT 746
BSNT_03730___ 747 ATTGCCGGAAAGCCTGTTTGACACTGCGGGAACGCTGACAACGATCATCA 796
..||||||||||||||.||||.||.||||||||..|.||.|||||.||.|
RBAM_023280__ 747 TCTGCCGGAAAGCCTGCTTGATACGGCGGGAACATTAACGACGATTATTA 796
BSNT_03730___ 797 CGCTGAATATGGGCCACACCACATACGGAAGTGTTGAAAACAATACGCTG 846
||.|.||.||||||||.|||||||||||.|||.|||||||.||||||.|.
RBAM_023280__ 797 CGTTAAACATGGGCCATACCACATACGGCAGTATTGAAAATAATACGTTA 846
BSNT_03730___ 847 TGGTCAATGGGGCTTGTGCTTCTGGTGATGTCATTCCTGTTCATCCTGCT 896
|||||.||||||||.||.|||||..|.|||||.||.|||||.||..||||
RBAM_023280__ 847 TGGTCTATGGGGCTCGTTCTTCTCATCATGTCGTTTCTGTTTATATTGCT 896
BSNT_03730___ 897 TATTCGCTACTTGTCATCTAGGAGGAAAGTGTAA 930
.||.|||||||||||.||||||||||||||||||
RBAM_023280__ 897 CATACGCTACTTGTCGTCTAGGAGGAAAGTGTAA 930
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