Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03701 and RBAM_023120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:59
# Commandline: needle
# -asequence dna-align/BSNT_03701___yqgX.1.9828.seq
# -bsequence dna-align/RBAM_023120___yqgX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03701___yqgX-RBAM_023120___yqgX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03701___yqgX-RBAM_023120___yqgX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03701___yqgX
# 2: RBAM_023120___yqgX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 646
# Identity: 491/646 (76.0%)
# Similarity: 491/646 (76.0%)
# Gaps: 17/646 ( 2.6%)
# Score: 1799.5
#
#
#=======================================
BSNT_03701___ 1 GTGAAATGGAGACGAATGCCAGTAGGGCCGATTCAAGCGAACGCATATTT 50
||||||||||||||||||||.|..||.||||||||.||.|||||.|||||
RBAM_023120__ 1 GTGAAATGGAGACGAATGCCGGCCGGTCCGATTCAGGCAAACGCGTATTT 50
BSNT_03701___ 51 TCTCATCAGTGATGATCAATGCCTG----ATTTTTGATCCGGGCGGCGA- 95
|||..|||||||.|||||.| |||| |||||||||||||||||.||
RBAM_023120__ 51 TCTTGTCAGTGAGGATCAGT-CCTGTCTTATTTTTGATCCGGGCGGGGAA 99
BSNT_03701___ 96 -GGGACATAAAATCAATCAA-TACATAAAAGAAAAAGGGCTGACGCCTTT 143
.|||| |||||||| ||| ||||||||||||||....||||.|||..|
RBAM_023120__ 100 GCGGAC--AAAATCAA-CAATTACATAAAAGAAAACAATCTGAAGCCGCT 146
BSNT_03701___ 144 AGCCATTTTGCTTACACATGCCCATTTTGACCATATTGGGGCGCTTGATG 193
.|||||.||.||.||.||.|||||||||||||||||.||.||||||||.|
RBAM_023120__ 147 GGCCATCTTACTGACGCACGCCCATTTTGACCATATCGGCGCGCTTGACG 196
BSNT_03701___ 194 AAGTGAGAGAAAAATGGGATATCCCTGTTTACCTGCATCAAAATGAAAAA 243
||||.|||||.|.|||||||.|.||.||.||.||.||..||||||||.||
RBAM_023120__ 197 AAGTAAGAGACAGATGGGATGTTCCCGTATATCTTCACAAAAATGAAGAA 246
BSNT_03701___ 244 AATTGGCTTACGGACGCTTCTTTAAACGGCTCCGGCATGCTGCGAGGGAT 293
||.|||||...||||.||||.||||||||.||.|||||..||||.||.||
RBAM_023120__ 247 AAGTGGCTGGAGGACTCTTCCTTAAACGGATCGGGCATATTGCGGGGCAT 296
BSNT_03701___ 294 AGAAGTCACAGCTAAGCCTGCAGATCATCTAATTGAAGGCGACGGTGAGT 343
.|..||.||.||...|||.||.||.|..||.||.|||||||||||....|
RBAM_023120__ 297 CGCCGTAACGGCACGGCCCGCCGAACGGCTCATCGAAGGCGACGGCATAT 346
BSNT_03701___ 344 TGAATATCGGGCCGTTTCATTTGGAAACATTATTTACGCCGGGACATTCA 393
||.|.||||||||.||.||||||||.|||||.||||||||||||||||||
RBAM_023120__ 347 TGGACATCGGGCCTTTCCATTTGGAGACATTGTTTACGCCGGGACATTCA 396
BSNT_03701___ 394 CCAGGCAGTGTATCTTACTACGTGAAAGATGCAGACTTGGTTATCTCCGG 443
||.||.||.||.|||||.||.|||||.||.||.||..||||.||.||.||
RBAM_023120__ 397 CCGGGAAGCGTTTCTTATTATGTGAAGGACGCGGATCTGGTGATTTCAGG 446
BSNT_03701___ 444 AGATGTCTTGTTCCAAGGCGGTATAGGACGTACGGATTTAATAGGCGGCG 493
.|||||..|.||.||.||.||.||.||.||.||.||||||...|||||..
RBAM_023120__ 447 TGATGTGCTCTTTCAGGGAGGCATCGGCCGCACTGATTTACACGGCGGAA 496
BSNT_03701___ 494 ATCAAGAGACG--CTGC-TGACGTCCATTCATGAAAAACTGCTTACGCTT 540
.||| .|||| .||| ||| .|||||||||.||||||||||.||||||
RBAM_023120__ 497 GTCA--GGACGTATTGCTTGA-TTCCATTCATCAAAAACTGCTCACGCTT 543
BSNT_03701___ 541 CCGGAACACACGCTGGTGTTAAGCGGCCATGGACCTGAAACAGACGTACT 590
||.|.|.|.||.||.|||||||||||.||.||.||.|||||.||..|.|.
RBAM_023120__ 544 CCCGGATATACACTTGTGTTAAGCGGGCACGGGCCGGAAACGGATATTCA 593
BSNT_03701___ 591 GACTGAGCAGGATCAAAATCCGTTTTTAAATGGGTTTTCATTGTAA 636
|||.||||||||.|.|||.||||||.|.|||||.||||||.|||||
RBAM_023120__ 594 GACAGAGCAGGAGCGAAACCCGTTTATCAATGGTTTTTCACTGTAA 639
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