Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03700 and RBAM_023110

See Amino acid alignment / Visit BSNT_03700 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence dna-align/BSNT_03700___yqgY.1.9828.seq
#    -bsequence dna-align/RBAM_023110___yqgY.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03700___yqgY-RBAM_023110___yqgY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03700___yqgY-RBAM_023110___yqgY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03700___yqgY
# 2: RBAM_023110___yqgY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     209/246 (85.0%)
# Similarity:   209/246 (85.0%)
# Gaps:           0/246 ( 0.0%)
# Score: 897.0
# 
#
#=======================================

BSNT_03700___      1 ATGAATCGCATGTTCCGGGTGTTAGGATTTTGGACGGGAATTTTTGCAGT     50
                     ||||||||||||||||||||||||||||||||||||||.||.||||||||
RBAM_023110__      1 ATGAATCGCATGTTCCGGGTGTTAGGATTTTGGACGGGGATATTTGCAGT     50

BSNT_03700___     51 CATGTTTTATTTAGGTGATATGAAAGATGCTTCCCTTTTATTTTTTGGAC    100
                     ||||||||.||||||.|..||||||||.|||||.|||||.||||||||||
RBAM_023110__     51 CATGTTTTTTTTAGGGGGCATGAAAGACGCTTCACTTTTGTTTTTTGGAC    100

BSNT_03700___    101 AGACGATCTTATTTGTGTTTCTATCGTATTTGAACTTAACCGAACGCATG    150
                     ||||||||||.||.||.|||||.||.||||||||..|.||.||.||.|||
RBAM_023110__    101 AGACGATCTTTTTCGTATTTCTTTCTTATTTGAATCTGACTGAGCGGATG    150

BSNT_03700___    151 TATATTTATATTTTTGGCGCTTATTTAACAATTTTCTTCGCCGGCTTTAC    200
                     ||||||||||||||.||.|||||.|||||..|.||.||||||||.|||||
RBAM_023110__    151 TATATTTATATTTTCGGAGCTTACTTAACCGTATTTTTCGCCGGATTTAC    200

BSNT_03700___    201 ATATTACTCAATTTTTATTATGGTGCCCGGCGGCGGAGGCCATTAA    246
                     |||||||||.||||||||||||...||.|||||||||..|||.|.|
RBAM_023110__    201 ATATTACTCTATTTTTATTATGACACCGGGCGGCGGAACCCACTGA    246


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