Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03671 and RBAM_022940

See Amino acid alignment / Visit BSNT_03671 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:57
# Commandline: needle
#    -asequence dna-align/BSNT_03671___tasA.1.9828.seq
#    -bsequence dna-align/RBAM_022940___tasA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03671___tasA-RBAM_022940___tasA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03671___tasA-RBAM_022940___tasA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03671___tasA
# 2: RBAM_022940___tasA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 792
# Identity:     592/792 (74.7%)
# Similarity:   592/792 (74.7%)
# Gaps:          12/792 ( 1.5%)
# Score: 2154.5
# 
#
#=======================================

BSNT_03671___      1 ATGGGTATGAAAAAGAAATTGAGTTTAGGAGTTGCTTCTGCAGCACTAGG     50
                     ||||||||||||||||||||.||.||.||.|||||.||.||.|||||.||
RBAM_022940__      1 ATGGGTATGAAAAAGAAATTAAGCTTGGGCGTTGCCTCAGCCGCACTCGG     50

BSNT_03671___     51 ATTAGCTTTAGTTGGAGGAGGAACATGGGCAGCATTTAACGACATTAAAT    100
                     .|||||.|||||.||||||||.||||||||.||||||||.||..|.||.|
RBAM_022940__     51 TTTAGCATTAGTAGGAGGAGGCACATGGGCCGCATTTAATGATGTGAAGT    100

BSNT_03671___    101 CAAAGGATGCTACTTTTGCATCAGGTACGCTTGATTTATCTGCTAAAGAG    150
                     |.|..||.|||||.|||||.|||||.||.|||||||||||.||||||||.
RBAM_022940__    101 CGACAGACGCTACATTTGCGTCAGGAACACTTGATTTATCGGCTAAAGAA    150

BSNT_03671___    151 AATTCAGCGAGTGTGAACTTATCAAATCTAAAGCCGGGAGATAAGTTGAC    200
                     .|.|||||.|.|||.||.||.|||||..||||.||.||.|||||.|||||
RBAM_022940__    151 CAATCAGCCAATGTCAATTTGTCAAACTTAAAACCAGGTGATAAATTGAC    200

BSNT_03671___    201 AAAGGATTTCCAATTTGAAAATAACGGATCACTTGCGATCAAAGAAGTTT    250
                     .||.|||||..||||...|||.||.||.||||||||.||.||||||||..
RBAM_022940__    201 GAAAGATTTTGAATTCAGAAACAATGGTTCACTTGCTATTAAAGAAGTGC    250

BSNT_03671___    251 TAATGGCGCTTAATTATGGAGATTTTAA---AGCAAACGGCGGCA--GCA    295
                     |.|||||..|.||||.|...||.|||||   ||||||     |.|  |.|
RBAM_022940__    251 TGATGGCTTTGAATTTTACTGACTTTAAAGGAGCAAA-----GAAAGGAA    295

BSNT_03671___    296 ATACATCTCCAGAAGATTTCCTCAGCCAGTTTGAAGTGACATTGTTGACA    345
                     ||..||||.|.||.|||||||||||.|||||||||.|.||..|..|||||
RBAM_022940__    296 ATGAATCTGCGGAGGATTTCCTCAGTCAGTTTGAAATTACGGTTCTGACA    345

BSNT_03671___    346 GTTGGAAAAGAGGGCGGCAATGGTTACCCGAAAAACATTATTTTAGATGA    395
                     ||.||.|||||.||.|||||.||.||.||.|||||.||.|||||..|.|.
RBAM_022940__    346 GTCGGTAAAGAAGGGGGCAACGGCTATCCTAAAAATATCATTTTGAAGGC    395

BSNT_03671___    396 TGCGAACCTTAAAGACTTGTATTTGATGTCTGCTAAAAATGATGCAGCGG    445
                     .||.|.|||.||||||||.||.||.|||||..|.|||.|.|||..|||.|
RBAM_022940__    396 GGCCAGCCTGAAAGACTTATACTTAATGTCAACAAAACAGGATAAAGCAG    445

BSNT_03671___    446 CTACTGAAAAAATCAAAAAACAAATAGACCCTAAATTCTTACATGCAAGC    495
                     ||.|.|||...||||..||.||.||.||.||.||||||.|...||..|||
RBAM_022940__    446 CTGCCGAAGCGATCAGCAAGCACATTGATCCGAAATTCCTGAGTGAGAGC    495

BSNT_03671___    496 GGTAAAGTCAATGTAGCAACAATTGACGGTAAAACCGCTCCTGAATATGA    545
                     ||.|||||||||||||||||.|||.||||.|||||.||||||||.||.||
RBAM_022940__    496 GGAAAAGTCAATGTAGCAACCATTAACGGCAAAACAGCTCCTGAGTACGA    545

BSNT_03671___    546 TGGTGTTCCAAAAACACCAACTGACTTCGATCAGGTTCAAATGGAAATCC    595
                     .||.|||||.|||||.||..||||.|..||.|||||...|||||||||||
RBAM_022940__    546 CGGAGTTCCGAAAACGCCTGCTGATTATGACCAGGTGAGAATGGAAATCC    595

BSNT_03671___    596 AATTCAAAGATGATAAAACAAAAGATGAAAACGGGCTTATG-GTTCAAAA    644
                     ||||.|||.||||.|...|||||..||...|| ||.|||.| ||.|||||
RBAM_022940__    596 AATTTAAAAATGACACCGCAAAAACTGCGGAC-GGATTAAGTGTGCAAAA    644

BSNT_03671___    645 TAAATATCAAGGCAACTCCATTAAGCTTCAATTCTCGTTCGAAGCTACAC    694
                     .||.|..||||||||..|.|||...|||||||||||.||.|||||.||.|
RBAM_022940__    645 CAAGTTCCAAGGCAATGCGATTTCTCTTCAATTCTCTTTTGAAGCAACGC    694

BSNT_03671___    695 AGTGGAACGGCTTGACAATCAAAAAGGACCATACTGATAAAGACGGTTAT    744
                     |.||||||||||||||.||.|..||.||.|||||.||||||||||||||.
RBAM_022940__    695 AATGGAACGGCTTGACCATTACGAAAGATCATACGGATAAAGACGGTTAC    744

BSNT_03671___    745 GTGAAAGAAAATGAAAAAGCGCACAGCGAGGATAAAAATTAA    786
                     ||.||.|||||||||||.||.|||||.|||||||||||.|||
RBAM_022940__    745 GTCAAGGAAAATGAAAAGGCTCACAGTGAGGATAAAAACTAA    786


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