Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03670 and RBAM_022930

See Amino acid alignment / Visit BSNT_03670 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:57
# Commandline: needle
#    -asequence dna-align/BSNT_03670___sinR.1.9828.seq
#    -bsequence dna-align/RBAM_022930___sinR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03670___sinR-RBAM_022930___sinR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03670___sinR-RBAM_022930___sinR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03670___sinR
# 2: RBAM_022930___sinR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 342
# Identity:     333/342 (97.4%)
# Similarity:   333/342 (97.4%)
# Gaps:           0/342 ( 0.0%)
# Score: 1629.0
# 
#
#=======================================

BSNT_03670___      1 ATGACATTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTA     50
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
RBAM_022930__      1 ATGACATTGATTGGCCAGCGTATTAAACAATACCGAAAAGAAAAAGGCTA     50

BSNT_03670___     51 CTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGCGAAGTCTTATTTAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_022930__     51 CTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGCGAAGTCTTATTTAA    100

BSNT_03670___    101 GCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAA    150
                     |||||||||||||||||.||||.|||||||||||||||||||||||||||
RBAM_022930__    101 GCTCAATAGAACGAAATTTACAGACGAACCCCTCCATTCAATTTCTCGAA    150

BSNT_03670___    151 AAAGTCTCCGCTGTTCTGGACGTCTCGGTTCATACTTTGCTCGATGAGAA    200
                     ||||||||||||||||||||||||||||||||||||||.||.|||||.||
RBAM_022930__    151 AAAGTCTCCGCTGTTCTGGACGTCTCGGTTCATACTTTACTTGATGAAAA    200

BSNT_03670___    201 ACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAATTGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_022930__    201 ACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAATTGG    250

BSNT_03670___    251 TTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTT    300
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
RBAM_022930__    251 TTCGCGATGCGATGACATCCGGGGTATCAAAAAAACAATTTCGTGAATTT    300

BSNT_03670___    301 TTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAG    342
                     ||||||||||||||||||||||||.|.|||||||||||||||
RBAM_022930__    301 TTAGATTATCAAAAATGGAGAAAAGCGCAAAAAGAGGAGTAG    342


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