Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03663 and RBAM_022870
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:57
# Commandline: needle
# -asequence dna-align/BSNT_03663___gcvPB.1.9828.seq
# -bsequence dna-align/RBAM_022870___gcvPB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03663___gcvPB-RBAM_022870___gcvPB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03663___gcvPB-RBAM_022870___gcvPB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03663___gcvPB
# 2: RBAM_022870___gcvPB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1491
# Identity: 1174/1491 (78.7%)
# Similarity: 1174/1491 (78.7%)
# Gaps: 39/1491 ( 2.6%)
# Score: 4656.5
#
#
#=======================================
BSNT_03663___ 1 ATGAGTAATCAGGACCAGGCACTTATTTTTGAACTTTCAAGAGAAGGCCG 50
||||.||||||.||.|||||.||||||||||||.|.||..|.|||||.||
RBAM_022870__ 1 ATGAATAATCAAGATCAGGCGCTTATTTTTGAAATGTCCCGCGAAGGGCG 50
BSNT_03663___ 51 AATCGGCTATAGTCTGCCGGAGCTCGATGTACCGGAAATCGA-ATTGGGG 99
.|||||.||.||.||.||||||||.|||||.|||||||..|| .|||...
RBAM_022870__ 51 TATCGGTTACAGCCTTCCGGAGCTTGATGTGCCGGAAACAGAGCTTGAAA 100
BSNT_03663___ 100 GACCTCTT----GTCAGACACCTATATTCGTGACGAAGACGCAGCGCTGC 145
|.|.|||| ||.| ||||||.||.||.|||||||||..|||||
RBAM_022870__ 101 GCCTTCTTCCCGGTGA-----CTATATCCGCGATGAAGACGCAAAGCTGC 145
BSNT_03663___ 146 CGGAGGTTTCAGAGCTGGACATCATGCGCCATTATACAGCGCTGTCCAAA 195
||||.||.||||||||.||.||.|||||.||||||||.||.||.||.||.
RBAM_022870__ 146 CGGAAGTATCAGAGCTCGATATTATGCGGCATTATACCGCTCTTTCTAAG 195
BSNT_03663___ 196 CGCAATCACGGGGTGGATTCCGGTTTTTATCCTCTCGGTTCTTGCACGAT 245
.|.||.|||||.||.|||||.||.||||||||.|||||.||.||.|||||
RBAM_022870__ 196 AGGAACCACGGAGTTGATTCAGGCTTTTATCCGCTCGGCTCCTGTACGAT 245
BSNT_03663___ 246 GAAATATAATCCGAAAATCAATGAAAAAATCGCACGTATTCCTGGTTTTG 295
||||||.|||||||||.|.|||||||||||.||.||.||..|.||||||.
RBAM_022870__ 246 GAAATACAATCCGAAATTAAATGAAAAAATTGCCCGGATCGCAGGTTTTT 295
BSNT_03663___ 296 CTGCGATTCATCCTCTTCAGGATGAAGACACGGTGCAAGGCGCATTAGAG 345
|.||.||||||||.||||||||.||.||||||||.||.||.||..|.|||
RBAM_022870__ 296 CCGCCATTCATCCGCTTCAGGACGAGGACACGGTTCAGGGGGCGCTTGAG 345
BSNT_03663___ 346 CTTTTATATGATTTAAGCAAGCACCTTGAAGAAATAACGGGAATGGATGA 395
||||||||.|||||||||...|||.|.||.||.||.|||||.|||||.||
RBAM_022870__ 346 CTTTTATACGATTTAAGCGGACACTTGGAGGAGATTACGGGCATGGACGA 395
BSNT_03663___ 396 GGTTACGCTTCAGCCTGCTGCCGGAGCGCACGGCGAATGGACGGGGCTGA 445
|||.|||||.||||||||.||.||.||.||||||||||||||.||.||||
RBAM_022870__ 396 GGTGACGCTGCAGCCTGCGGCGGGCGCTCACGGCGAATGGACCGGCCTGA 445
BSNT_03663___ 446 TGATGATCCGTGCCTATCATGAAGCTCGCGGGGATTTCAAGCGGACGAAG 495
||||||||||.|||||.||.|||||.||.||.||.|||...||||||||.
RBAM_022870__ 446 TGATGATCCGCGCCTACCACGAAGCGCGGGGAGACTTCGGACGGACGAAA 495
BSNT_03663___ 496 GTCATTGTCCCTGATTCCGCGCACGGGACGAATCCTGCATCAGCGACAGT 545
||.||||||||||||||.||.|||||.||||||||.|||||.||.||.||
RBAM_022870__ 496 GTGATTGTCCCTGATTCAGCCCACGGTACGAATCCGGCATCCGCCACGGT 545
BSNT_03663___ 546 AGCAGGCTTTGAAACTGTTACGGTGAAATCGAATGAAAATGGGCTTGTTG 595
.||.||.||||||||..||||.||.||.||.|||||..|.|||||.||||
RBAM_022870__ 546 CGCCGGTTTTGAAACGATTACCGTTAAGTCAAATGAGCACGGGCTGGTTG 595
BSNT_03663___ 596 ATTTAGAGGATTTAAAAAGAGCAGTGAATGAAGAAACTGCAGCTCTCATG 645
|..|.||.|||||.|||||||||||.||.||||||||.||.||.||.|||
RBAM_022870__ 596 ACATTGAAGATTTGAAAAGAGCAGTAAACGAAGAAACAGCGGCGCTGATG 645
BSNT_03663___ 646 CTGACGAATCCGAACACGCTCGGCTTGTTTGAGGAGCAGATTACAGAGAT 695
|||||||||||||||||.|||||.||.||||||||..|.|||||.||.||
RBAM_022870__ 646 CTGACGAATCCGAACACCCTCGGGTTATTTGAGGAAAACATTACGGAAAT 695
BSNT_03663___ 696 GGCGGAAATTGTACACCAAGCGGGGGGGAAACTGTATTATGACGGCGCTA 745
|||.|||||.||.||.||.||.||.||.||.||.|||||||||||.||.|
RBAM_022870__ 696 GGCTGAAATCGTCCATCAGGCCGGCGGAAAGCTTTATTATGACGGAGCGA 745
BSNT_03663___ 746 ATTTAAATGCCGTTTTAAGCAAGGCGAGACCTGGAGATATGGGATTTGAC 795
|||||||||||||||||||.||.||.|||||.||||||||||||||||||
RBAM_022870__ 746 ATTTAAATGCCGTTTTAAGTAAAGCAAGACCGGGAGATATGGGATTTGAC 795
BSNT_03663___ 796 GTGGTGCACCTCAACCTGCATAAAACATTCACAGGCCCTCATGGCGGCGG 845
||.||.|||||.||.||||||||||||||.||.||.||.||.|||||.||
RBAM_022870__ 796 GTCGTTCACCTTAATCTGCATAAAACATTTACCGGGCCGCACGGCGGGGG 845
BSNT_03663___ 846 AGGCCCCGGCTCAGGCCCTGTCGGCGTAAAAAAAGATCTGATTCCTTATT 895
|||.||.||||||||.||.|||||.||.||||||||..|.|||||.|||.
RBAM_022870__ 846 AGGACCGGGCTCAGGTCCGGTCGGAGTGAAAAAAGAATTCATTCCGTATC 895
BSNT_03663___ 896 TGCCAAAGCCAGTTTTAGTTAAAAAAGAAGGGCGCTTTACGTTTGATTAT 945
||||.||.||.|||.|....||||||||.||.||.||.||.|||||.|||
RBAM_022870__ 896 TGCCGAAACCCGTTCTCACGAAAAAAGAGGGCCGTTTGACTTTTGACTAT 945
BSNT_03663___ 946 GACCGCCCTCATGCGATCGGCCGTGTGAAGCCGTATTACGGCAACTTTGG 995
||.||.||.||..|||||||.||.||.||.||.||||||||||||||.||
RBAM_022870__ 946 GATCGGCCGCAGTCGATCGGGCGCGTAAAACCTTATTACGGCAACTTCGG 995
BSNT_03663___ 996 CATTAATGTGAGAGCGTATACGTATATTCGCTCCATGGGGCCTGACGGAT 1045
|||||||||.|||||.||.||||||||.||.|||||||||||||||||.|
RBAM_022870__ 996 CATTAATGTCAGAGCCTACACGTATATCCGTTCCATGGGGCCTGACGGCT 1045
BSNT_03663___ 1046 TAAAGGCTGTTACTGAGAACGCAGTGTTAAACGCCAATTATATGATGAGA 1095
||||.|||||.||.||.|||||.||.|||||.||.|||||||||||||||
RBAM_022870__ 1046 TAAAAGCTGTGACCGAAAACGCGGTTTTAAATGCAAATTATATGATGAGA 1095
BSNT_03663___ 1096 AAGCTCGCGCCTTATTACGATCTTCCGTTTGACCGCCATTGCAAGCATGA 1145
|..||||||||||||||.|||||.||||.||||||.||||||||||||||
RBAM_022870__ 1096 AGACTCGCGCCTTATTATGATCTCCCGTATGACCGTCATTGCAAGCATGA 1145
BSNT_03663___ 1146 ATTTGTATTATCAGGGAAG-CGGCAGAAAAAGCTGGGAGTGCGTACGCTT 1194
||||||.||||| |||||| .|||||||||||||.||.||.||.||||||
RBAM_022870__ 1146 ATTTGTGTTATC-GGGAAGAAGGCAGAAAAAGCTCGGCGTTCGAACGCTT 1194
BSNT_03663___ 1195 GATATTGCAAAACGGCTCCTTGATTTCGGCTATCATCCGCCGACTATTTA 1244
||||||||.||||||||..|.||||||||||||||||||||||||.|.||
RBAM_022870__ 1195 GATATTGCCAAACGGCTTTTGGATTTCGGCTATCATCCGCCGACTGTGTA 1244
BSNT_03663___ 1245 TTTCCCGCTTAATGTTGAAGAATGCATCATGATCGAGCCGACGGAGACCG 1294
|||.||.||.||||||||||||.||||.||||||||.||||||||.||.|
RBAM_022870__ 1245 TTTTCCTCTCAATGTTGAAGAAAGCATTATGATCGAACCGACGGAAACGG 1294
BSNT_03663___ 1295 AATCAAAGGAAACACTGGACGCGTTTATTGATGCTATGATTCAAATCGCA 1344
|||||||||||||.||.||.||||||||.|||||.|||||||||||.||.
RBAM_022870__ 1295 AATCAAAGGAAACGCTAGATGCGTTTATAGATGCCATGATTCAAATTGCG 1344
BSNT_03663___ 1345 AAAGAAGCGGAGGAGAAT--CCGGAGCTTGTTCAGGAGGCCCCGCATACA 1392
...||||||||| |||| ||.||..|.||||||||.||.||.||||||
RBAM_022870__ 1345 CGGGAAGCGGAG--GAATCGCCTGAAATCGTTCAGGAAGCGCCCCATACA 1392
BSNT_03663___ 1393 ACGATTGTAAAAAGAATGGATGAAACAAAAGCGGCGAGACACCCGGTGCT 1442
||..||||.|||||||||||||||||.||.|||||.|||.|.||.||..|
RBAM_022870__ 1393 ACAGTTGTCAAAAGAATGGATGAAACCAAGGCGGCAAGAAAGCCCGTTTT 1442
BSNT_03663___ 1443 CAGATACGA----------GGCGGTA------GAAAGATAA 1467
.|.|||||| |.|||.| ||
RBAM_022870__ 1443 AAAATACGAACGTACACTTGACGGCAGCCGCTGA------- 1476
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