Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03657 and RBAM_022840
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:56
# Commandline: needle
# -asequence dna-align/BSNT_03657___mntR.1.9828.seq
# -bsequence dna-align/RBAM_022840___mntR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03657___mntR-RBAM_022840___mntR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03657___mntR-RBAM_022840___mntR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03657___mntR
# 2: RBAM_022840___mntR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 436
# Identity: 376/436 (86.2%)
# Similarity: 376/436 (86.2%)
# Gaps: 14/436 ( 3.2%)
# Score: 1683.0
#
#
#=======================================
BSNT_03657___ 1 ATGACAACACCAAGTATGGAAGATTATATTGAACAGATTTATATGCTGAT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_022840__ 1 ATGACAACACCAAGTATGGAAGATTATATTGAACAGATTTATATGCTGAT 50
BSNT_03657___ 51 TGAAGAAAAAGGATATGCACGAGTTTCCGATATCGCGGAAGCATTGGCAG 100
.||||||||||||||||||||.|||||.||||||||||||||.|||||||
RBAM_022840__ 51 AGAAGAAAAAGGATATGCACGGGTTTCTGATATCGCGGAAGCTTTGGCAG 100
BSNT_03657___ 101 TCCATCCCTCCTCTGTAACAAAAATGGTTCAAAAACTAGATAAAGACGAA 150
||||.||||||||||||||.|||||||||||||||||||||||||||||.
RBAM_022840__ 101 TCCACCCCTCCTCTGTAACGAAAATGGTTCAAAAACTAGATAAAGACGAG 150
BSNT_03657___ 151 TATTTAATTTATGAAAAATATCGCGGTCTCGTGTTAACGTCTAAAGGGAA 200
|||||.||||||||||||||||||||.|||||.||.|||||.|||||.||
RBAM_022840__ 151 TATTTGATTTATGAAAAATATCGCGGGCTCGTATTGACGTCAAAAGGCAA 200
BSNT_03657___ 201 AAAAATAGGCAAACGGCTGGTATACAGACATGAATTGCTTGAGCAGTTTT 250
|||.||.|||||||||||.|||||||||||.|||||||||||||||||||
RBAM_022840__ 201 AAAGATCGGCAAACGGCTCGTATACAGACACGAATTGCTTGAGCAGTTTT 250
BSNT_03657___ 251 TAAGAATCATTGGTGTTGATGAAGAGAAAATATATAACGATGTCGAAGGA 300
||||||||||||||||||||||||||||.||.||.||.|||||.||||||
RBAM_022840__ 251 TAAGAATCATTGGTGTTGATGAAGAGAAGATTTACAATGATGTTGAAGGA 300
BSNT_03657___ 301 ATCGAACATCATTTAAGCTGGAACAGTATTGATCGCATCGGGGATCTTGT 350
||||||||||||.|.|||||||||||.|||||.||||||||.||.||.||
RBAM_022840__ 301 ATCGAACATCATCTGAGCTGGAACAGCATTGACCGCATCGGCGACCTCGT 350
BSNT_03657___ 351 TCAATATTTTGAAGAAGATGATGCCCGTAAAAAAGATCTGAAATCAATCC 400
|||.|||||.|||||.||.||...|||.||||||||..|||||||..|.|
RBAM_022840__ 351 TCAGTATTTCGAAGATGACGAAAGCCGGAAAAAAGAATTGAAATCCGTAC 400
BSNT_03657___ 401 AAAAGAAAACAGAACATC-------ATAATCAGTAA 429
|.||.|||||.|||.||| ||||
RBAM_022840__ 401 AGAAAAAAACCGAAAATCCCGGTGAATAA------- 429
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