Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03655 and RBAM_022820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:56
# Commandline: needle
# -asequence dna-align/BSNT_03655___yqhP.1.9828.seq
# -bsequence dna-align/RBAM_022820___yqhP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03655___yqhP-RBAM_022820___yqhP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03655___yqhP-RBAM_022820___yqhP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03655___yqhP
# 2: RBAM_022820___yqhP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 403
# Identity: 317/403 (78.7%)
# Similarity: 317/403 (78.7%)
# Gaps: 14/403 ( 3.5%)
# Score: 1252.0
#
#
#=======================================
BSNT_03655___ 1 ATGAATCATCGTGTACAACCTATTATTGCTGTATTAATTGCGCTGGGAGC 50
|||||||||||||||||||||.||.||||||||||.||.|||||.||.||
RBAM_022820__ 1 ATGAATCATCGTGTACAACCTTTTTTTGCTGTATTGATAGCGCTTGGCGC 50
BSNT_03655___ 51 GTTCGGTTTCCTCTATGTGCTGGTAACCAATCCCGGAGAAATG---GCAA 97
.|||||||||.|.||||.|..|||||||||.|||||..|.||| .|||
RBAM_022820__ 51 ATTCGGTTTCATTTATGCGGCGGTAACCAACCCCGGGCAGATGATTTCAA 100
BSNT_03655___ 98 AAATGGCGGTAACCGTCATCGTGGCAGGTATCATTATTTATTTTATTGTG 147
.| |||.|.|||||.||..|.|||||.|||||||||||||||||.|||
RBAM_022820__ 101 GA---GCGATCACCGTTATTATCGCAGGCATCATTATTTATTTTATCGTG 147
BSNT_03655___ 148 AAATATGTAATGAATCG----AAATGCGGGCAGCGAAGGAGCAGCCTTCA 193
|.....||..||||.|| | |.|||.|.||.|||.|.||.||||
RBAM_022820__ 148 AGGACGGTCCTGAACCGCCGCA----CCGGCCGTGACGGAACCGCTTTCA 193
BSNT_03655___ 194 AAAAAGCGGCGAAACAATCGCGGCGCCGGATGAAAGAACAAAAAGCAAAA 243
.|||||||||.|.|||||||||||.|||.|||||.||.||||||||.||.
RBAM_022820__ 194 GAAAAGCGGCCAGACAATCGCGGCTCCGAATGAAGGAGCAAAAAGCGAAG 243
BSNT_03655___ 244 CACCGCGCCGGACATAAGGGACGTGTCAGCCACCTGCGAAGCGTTCCGAG 293
||||||||||||||.|..||.||.||||||||..||||.|||||.|||||
RBAM_022820__ 244 CACCGCGCCGGACACAGAGGCCGGGTCAGCCATTTGCGGAGCGTGCCGAG 293
BSNT_03655___ 294 CGCCAGCAAGCCTAAGCCGATGATTCTCAAGAAAAAAAGCCAGACTCAGC 343
|..|||||..||.||||||||||||||.|||||||||||||||||.||||
RBAM_022820__ 294 CAGCAGCAGACCGAAGCCGATGATTCTTAAGAAAAAAAGCCAGACCCAGC 343
BSNT_03655___ 344 TGACTGTTATAGAAGGGAAAAAAAATAAAAAGAAAAACAGGGCGCTTTTT 393
|.||.||.||||||||.|||||.|||||||||||||||||.|||||||||
RBAM_022820__ 344 TTACCGTCATAGAAGGCAAAAAGAATAAAAAGAAAAACAGAGCGCTTTTT 393
BSNT_03655___ 394 TAA 396
|||
RBAM_022820__ 394 TAA 396
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