Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03654 and RBAM_022810
See
Amino acid alignment /
Visit
BSNT_03654 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:56
# Commandline: needle
# -asequence dna-align/BSNT_03654___yqhQ.1.9828.seq
# -bsequence dna-align/RBAM_022810___yqhQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03654___yqhQ-RBAM_022810___yqhQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03654___yqhQ-RBAM_022810___yqhQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03654___yqhQ
# 2: RBAM_022810___yqhQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 979
# Identity: 766/979 (78.2%)
# Similarity: 766/979 (78.2%)
# Gaps: 44/979 ( 4.5%)
# Score: 3008.5
#
#
#=======================================
BSNT_03654___ 1 ATGTCAAAACATAAAGTTCCGCCCGCTTACGGCGGGCAGGCTGTTGTGGA 50
|||||.|||||.|||...||.||.||||||||||||||||||||.||.||
RBAM_022810__ 1 ATGTCCAAACAAAAAACGCCCCCTGCTTACGGCGGGCAGGCTGTCGTTGA 50
BSNT_03654___ 51 AGGCGTTATGTTTGGCGG-----AAAGCATCATTACGTTACAGCCATCAG 95
|||.||.|||||.||||| ||| ||||.|||||.||||||.|
RBAM_022810__ 51 AGGGGTCATGTTCGGCGGCAGAAAAA-----ATTATGTTACCGCCATCCG 95
BSNT_03654___ 96 AAGAACGGATGGAAGCATTGACTTTTTTAAGCTTCC-------CCGCAAA 138
.||.|..||.|||||||||||.|||||.|||||||| |||
RBAM_022810__ 96 CAGGAATGACGGAAGCATTGATTTTTTCAAGCTTCCGAGAGTGCCG---- 141
BSNT_03654___ 139 CACAACCCGAAACTGAACATCG----TGAAAAAGATCCCGTTTTTACGGG 184
|||.|.||.|| .||| |.||||||||.||.|||||.||||
RBAM_022810__ 142 ---AACGCCAAGCT----TTCGGCTTTAAAAAAGATTCCTTTTTTGCGGG 184
BSNT_03654___ 185 GGATCGCGGCCATTATCGAAGCGAGTGCAAACGGCACAAAGCATCTGAAT 234
|.||||..|||||.||.||.|||||.||.|||||||||||||||.|.||.
RBAM_022810__ 185 GAATCGTCGCCATCATTGAGGCGAGCGCCAACGGCACAAAGCATTTAAAC 234
BSNT_03654___ 235 TTTTCAAGCGAACGTTACGGGCTCGATCCATC----TGAAGACAAGACAC 280
|||||.|||||||||||||||||.||||| || |||.|.|||| |
RBAM_022810__ 235 TTTTCCAGCGAACGTTACGGGCTTGATCC-TCAAGATGACGCCAAG---C 280
BSNT_03654___ 281 TTGAGCAGGAAGAAAAAAAATCCTCCGGGC-TGTCTATGTATCTCAGCCT 329
|.|||||||||| |.||.||...|.||||| |.||.||||.|.|||||||
RBAM_022810__ 281 TGGAGCAGGAAG-ATAAGAAGGGTTCGGGCTTATCGATGTTTTTCAGCCT 329
BSNT_03654___ 330 CGCAGTTATAGGCGTCCTATCATTTTTGTTCAGTAAATTCGTATTTACAT 379
.||.||.||.|||||.||.||.|||||||||||.||||||||.|||||..
RBAM_022810__ 330 GGCGGTGATCGGCGTTCTGTCGTTTTTGTTCAGCAAATTCGTTTTTACGC 379
BSNT_03654___ 380 TGGTTCCAGTTTTCTTAGCGGAACTGACAAGGCCGATTTTTTCCTCGGAC 429
|.||.||.||.|||||||||||.||...||||||..|.||||||||.|||
RBAM_022810__ 380 TCGTCCCGGTCTTCTTAGCGGAGCTTGTAAGGCCCGTATTTTCCTCAGAC 429
BSNT_03654___ 430 ACGGCGCAAATCGCGGTTGAAAGCCTGTTTAAGTTGATTTTGCTGCTCGG 479
.|.|||||.||||...|.|||||.|||||||||.|.|||.||||.|||||
RBAM_022810__ 430 GCCGCGCAGATCGGAATCGAAAGTCTGTTTAAGCTTATTCTGCTTCTCGG 479
BSNT_03654___ 480 TTACATCTATTTTTTGTCCATGACACCGCTTATTAAAAGAGTGTTTCAAT 529
.|||||.||||||||.||.|||||.|||.|.|||||||||||||||||||
RBAM_022810__ 480 CTACATTTATTTTTTATCAATGACGCCGTTAATTAAAAGAGTGTTTCAAT 529
BSNT_03654___ 530 ATCATGGAGCCGAACATAAAGTCATAAACTGTTATGAACAGAATTTGCCA 579
|||||||||||||||||||.||||||||||||||||||||||||||||||
RBAM_022810__ 530 ATCATGGAGCCGAACATAAGGTCATAAACTGTTATGAACAGAATTTGCCA 579
BSNT_03654___ 580 ATTACTGTGGAGAATGTCCAAAACCAATCTCGGCTTCATTACCGCTGCGG 629
|||||..|.||.|||||.||.||.||.||.||||||||||||||.|||||
RBAM_022810__ 580 ATTACAATAGAAAATGTTCAGAAGCAGTCACGGCTTCATTACCGTTGCGG 629
BSNT_03654___ 630 ATCAAGCTTTATTTTATTTACGATTATTGTCGGCATGTTTGTTTATTTAC 679
.|||||||||||||||||||||||.||||||||||||||.||.|||||||
RBAM_022810__ 630 TTCAAGCTTTATTTTATTTACGATCATTGTCGGCATGTTCGTCTATTTAC 679
BSNT_03654___ 680 TCGTTCCGACAGATCCGCTTTGGCTGCGTGTTATAGATCGTGTCGCACTG 729
|||||||||||||||||||||||.||||..||.||||..|..|.||.||.
RBAM_022810__ 680 TCGTTCCGACAGATCCGCTTTGGGTGCGGATTTTAGACAGGATTGCGCTT 729
BSNT_03654___ 730 ATACCGGTCGTGCTTGGTATATCCTTTGAAGTTCTGCAGCTGACAAACAA 779
|||||||||||.||.||.||.|||||||||||.||.||||||||.||||.
RBAM_022810__ 730 ATACCGGTCGTTCTCGGCATCTCCTTTGAAGTGCTCCAGCTGACGAACAG 779
BSNT_03654___ 780 AGTGCGTGACATTCCCGGTCTGAAATTACTTGGGTACCCGGGACTTTGGC 829
||||||..|.||.||||.|.|||||.|.||.||.||.||.||.||.||||
RBAM_022810__ 780 AGTGCGGAATATCCCCGTTTTGAAAGTGCTCGGTTATCCCGGCCTGTGGC 829
BSNT_03654___ 830 TTCAGCTGTTAACCACAAAGGAACCTAAGGATGAACAGGTTGAAGTTGCC 879
|.|||||.|||||.|||||||||||...||||||.|||||.||.||||||
RBAM_022810__ 830 TGCAGCTTTTAACGACAAAGGAACCGGCGGATGACCAGGTCGAGGTTGCC 879
BSNT_03654___ 880 ATCGAAAGCTTTAACGAACTTCTCAGACTCGAAG-CATTGTCTGAGCAAA 928
||.||||||||||||||.|||||||||||.|||| |||| ||.||.||.|
RBAM_022810__ 880 ATAGAAAGCTTTAACGAGCTTCTCAGACTGGAAGACATT-TCAGAACAGA 928
BSNT_03654___ 929 ATCAGAAGCCTTCTCACAACGTCATCTAA 957
...|.||.||.|||||||||||.||||.|
RBAM_022810__ 929 GCGAAAAACCGTCTCACAACGTAATCTGA 957
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.