Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03651 and RBAM_022790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:56
# Commandline: needle
# -asequence dna-align/BSNT_03651___yqhT.1.9828.seq
# -bsequence dna-align/RBAM_022790___yqhT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03651___yqhT-RBAM_022790___yqhT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03651___yqhT-RBAM_022790___yqhT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03651___yqhT
# 2: RBAM_022790___yqhT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1078
# Identity: 830/1078 (77.0%)
# Similarity: 830/1078 (77.0%)
# Gaps: 32/1078 ( 3.0%)
# Score: 3175.0
#
#
#=======================================
BSNT_03651___ 1 ATGAAGCTAGAGAAATTAAGAAACCTGTTTGGACAGCTGGGAATTGACGG 50
|||||.||.||||||||..||||.||.||.||.|||||||..||.|||||
RBAM_022790__ 1 ATGAAACTTGAGAAATTGCGAAATCTTTTCGGTCAGCTGGATATAGACGG 50
BSNT_03651___ 51 CATGCTGGTTACAAGCAGCACGAATGTACGCTATATGACAGGGTTTACAG 100
.|||.||||.||||||..|.|.|||.|.|..||||||||.||.|||||.|
RBAM_022790__ 51 AATGTTGGTGACAAGCTCCGCCAATCTGCAGTATATGACGGGATTTACGG 100
BSNT_03651___ 101 GTTCGGCGGGTTTGGCTGTTATATCGGGTGACAAA------GCAGCGTTT 144
|||||.|.||..|.||.||.|||||| ||| ||.||.|||
RBAM_022790__ 101 GTTCGTCAGGCCTTGCGGTCATATCG------AAAGAACGTGCGGCATTT 144
BSNT_03651___ 145 ATTACGGATTTTCGTTATACTGAGCAGGCGAAGGTTCAGGTAAAGGGTTT 194
||.||||||||.|||||.||.||||||||||||...||.||.||||||||
RBAM_022790__ 145 ATCACGGATTTCCGTTACACCGAGCAGGCGAAGACGCAAGTGAAGGGTTT 194
BSNT_03651___ 195 TGAGATCATTGAACATGGCGGCAGCTTGATTCAGACCACTGCCGACAC-- 242
|||.||.||.||.||.|||||.|||||.||.||.||..||||.||.||
RBAM_022790__ 195 TGACATTATCGAGCACGGCGGAAGCTTAATCCAAACGGCTGCGGATACGA 244
BSNT_03651___ 243 -TGTTGAATCGTTTGGCATCAAGCGTCTCGGTTTTGAACAGAACAGCATG 291
|.|||| ||..|||||.||....|||||.||.||.||.|||||||||
RBAM_022790__ 245 TTCTTGA---GTACGGCATTAAAAAACTCGGCTTCGAGCAAAACAGCATG 291
BSNT_03651___ 292 ACATATGGCACTTACGCTTCATAC--AGCGCCGTTAT-CAGTGATGCCGA 338
||.||.||.||.||.||.||.||| |||| ||..| ||| ||.||.||
RBAM_022790__ 292 ACGTACGGAACATATGCATCCTACCAAGCG--GTGCTGCAG-GAAGCGGA 338
BSNT_03651___ 339 ATTAGTGCCTGTGGCTGAATCCGTGGAAAAGTTGCGCTTGATTAAGTCTA 388
..|.||.||.||.||.||.|||||.|||||||||||||||||||||||.|
RBAM_022790__ 339 GATGGTTCCCGTCGCGGATTCCGTTGAAAAGTTGCGCTTGATTAAGTCAA 388
BSNT_03651___ 389 GTGAAGAGATTAAGATATTAGAGGAAGCTGCGAAGATTGCAGATGATGCC 438
||||||||||||||||||||||||||||||||||||||||.||||||||.
RBAM_022790__ 389 GTGAAGAGATTAAGATATTAGAGGAAGCTGCGAAGATTGCGGATGATGCG 438
BSNT_03651___ 439 TTCAGACATATCTTGACGTTTATGAAACCCGGCATTTCTGAAATCGCTGT 488
||...||||||..||||||||||.|||||.|||||.||.||.||..|.||
RBAM_022790__ 439 TTTGAACATATTCTGACGTTTATCAAACCGGGCATCTCAGAGATTTCAGT 488
BSNT_03651___ 489 TGCCAATGAGCTGGAGTTTTATATGAGAAGCCAGGGAGCAGACAGCTCTT 538
|||.||.|||||.||.||||||||||||.|.||.|||||||||.||||||
RBAM_022790__ 489 TGCAAACGAGCTTGAATTTTATATGAGACGTCAAGGAGCAGACGGCTCTT 538
BSNT_03651___ 539 CTTTTGATATGATTGTCGCCTCAGGCCTTCGTTCAAGCCTTCCGCACGGT 588
|.|||||||||||.||||||||.||..|..|.||.||||||||.|||||.
RBAM_022790__ 539 CCTTTGATATGATCGTCGCCTCGGGAGTCAGATCCAGCCTTCCCCACGGA 588
BSNT_03651___ 589 GTGGCCAGTGACAAACTGATTGAAAGCGGAGACCTTGTTACGCTTGATTT 638
|||||.||.|.||||.|||||||||..||||||.|.||.|||||.|||||
RBAM_022790__ 589 GTGGCAAGCGGCAAATTGATTGAAAAGGGAGACTTGGTCACGCTCGATTT 638
BSNT_03651___ 639 TGGCGCTTATTATAAAGGATATTGTTCTGATATTACCCGGACGGTCGCTG 688
.|||||||||||||||||.||||||||||||||.||.||.||.|||||.|
RBAM_022790__ 639 CGGCGCTTATTATAAAGGGTATTGTTCTGATATCACACGCACCGTCGCGG 688
BSNT_03651___ 689 TAGGTCAGCCCAGTGATCAATTGAAGGAGATCTATCAGGTTGTATTTGAT 738
|.||..||||.||||||.||.||||.|||||.||||||||.||||..|||
RBAM_022790__ 689 TCGGAGAGCCAAGTGATAAACTGAAAGAGATTTATCAGGTCGTATACGAT 738
BSNT_03651___ 739 GCTCAGGCGCTTGGCGTCGCACATATTAAGCCGGGAATGACAGGAAAAGA 788
||.||.||||||||.|||...||||||||.||.||.|||||.||||||||
RBAM_022790__ 739 GCCCAAGCGCTTGGTGTCCTGCATATTAAACCCGGCATGACGGGAAAAGA 788
BSNT_03651___ 789 GGCTGACGCCCTCACAAGGGATCATATTGCTGCAAAAGGCTACGGTGACT 838
.||.||||||||.||.||||||||.||..|.||||||||||||||..|.|
RBAM_022790__ 789 AGCGGACGCCCTGACGAGGGATCACATCACCGCAAAAGGCTACGGACAGT 838
BSNT_03651___ 839 ATTTCGGCCATTCAACCGGGCACGGGCTCGGCATGGAAGTTCATGAATCG 888
|||||||||||||.||.||.||||||.||||.||||||||.||||||||.
RBAM_022790__ 839 ATTTCGGCCATTCGACAGGACACGGGTTCGGAATGGAAGTCCATGAATCA 888
BSNT_03651___ 889 CCGGGATTATCCGTCAGATCTTCAGCTATCCTTGAACCGGGTATGGTGGT 938
|||||..|.||..||||.||.||.||..|.|||||.|||||.||||.|||
RBAM_022790__ 889 CCGGGGCTGTCTTTCAGGTCATCGGCCGTTCTTGAGCCGGGCATGGCGGT 938
BSNT_03651___ 939 CACAGTGGAGCCGGGCATTTACATACCAGAAACAGGCGGTGTCCGC---- 984
.||.||.|||||||||||.||||||||.||....||.|| |||
RBAM_022790__ 939 AACGGTCGAGCCGGGCATATACATACCGGATGTTGGGGG----CGCAAGA 984
BSNT_03651___ 985 ATTGAAGATGACATCGTGATTACAGAAAACGGCAACCGGACAATCACCCA 1034
||.||||||||.|||.|.||.||.||..||||||||||||||||.||.||
RBAM_022790__ 985 ATCGAAGATGATATCATCATCACTGACGACGGCAACCGGACAATTACGCA 1034
BSNT_03651___ 1035 TTCCCCAAAAGAACTTATTATTTTGTGA 1062
||||||.||||||.|.||||||||||||
RBAM_022790__ 1035 TTCCCCTAAAGAATTAATTATTTTGTGA 1062
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