Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03650 and RBAM_022780

See Amino acid alignment / Visit BSNT_03650 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence dna-align/BSNT_03650___efp.1.9828.seq
#    -bsequence dna-align/RBAM_022780___efp.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03650___efp-RBAM_022780___efp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03650___efp-RBAM_022780___efp.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03650___efp
# 2: RBAM_022780___efp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 558
# Identity:     482/558 (86.4%)
# Similarity:   482/558 (86.4%)
# Gaps:           0/558 ( 0.0%)
# Score: 2106.0
# 
#
#=======================================

BSNT_03650___      1 ATGATTTCAGTTAACGATTTCCGTACAGGATTAACAATTGAAGTAGATGG     50
                     ||||||||||||||||||||.|||||||||.||||.|||||||||||.||
RBAM_022780__      1 ATGATTTCAGTTAACGATTTTCGTACAGGACTAACGATTGAAGTAGACGG     50

BSNT_03650___     51 CGGCATTTGGCGCGTCGTTGACTTCCAGCACGTAAAACCTGGAAAAGGTG    100
                     ||||||||||||||||||||||||||||||||||||.||.||||||||.|
RBAM_022780__     51 CGGCATTTGGCGCGTCGTTGACTTCCAGCACGTAAAGCCGGGAAAAGGAG    100

BSNT_03650___    101 CGGCATTTGTCCGCTCTAAACTCCGCAACCTTCGCACTGGCGCGATTCAG    150
                     |||||||||||||.||||||.|.||.|||||.|||||.|||||.||||||
RBAM_022780__    101 CGGCATTTGTCCGTTCTAAATTGCGTAACCTGCGCACGGGCGCTATTCAG    150

BSNT_03650___    151 GAAAAAACATTCCGCGCTGGTGAAAAAGTAGCGAAAGCGCAAATCGAAAC    200
                     ||.|||||||||||.||.|||||||||||.||||||||||||||||||||
RBAM_022780__    151 GAGAAAACATTCCGTGCAGGTGAAAAAGTCGCGAAAGCGCAAATCGAAAC    200

BSNT_03650___    201 CAAAACAATGCAATATCTATATGCAAACGGAGATCAGCACGTATTTATGG    250
                     .|||||.|||||.|||||.|||||.|||||.|||||||||||.||.||||
RBAM_022780__    201 AAAAACGATGCAGTATCTTTATGCCAACGGCGATCAGCACGTGTTCATGG    250

BSNT_03650___    251 ATACTTCTTCTTATGAGCAGCTTGAACTGAGCGCAACTCAAATCGAAGAA    300
                     ||||....||.|||||.|||||||||.|||.||.||..||||||||||||
RBAM_022780__    251 ATACAAGCTCATATGAACAGCTTGAATTGAACGAAAACCAAATCGAAGAA    300

BSNT_03650___    301 GAATTAAAATACCTGCTAGAAAACATGTCTGTGCATATCATGATGTACCA    350
                     |||||||||||.||.||.|||||.|||||||||||.|||||||||||.||
RBAM_022780__    301 GAATTAAAATATCTTCTGGAAAATATGTCTGTGCACATCATGATGTATCA    350

BSNT_03650___    351 GGATGAAACACTTGGTATCGAACTTCCAAACACAGTTGAGCTGAAAGTTG    400
                     |..||||||.||.|||||.|||||.||.|||||||||||.||||||||||
RBAM_022780__    351 GTCTGAAACGCTCGGTATTGAACTGCCGAACACAGTTGAACTGAAAGTTG    400

BSNT_03650___    401 TTGAAACTGAACCTGGTATTAAAGGTGATACAGCGTCAGGCGGTACAAAA    450
                     |||||||.||.||.||.||||||||.||.||.|||||||||||.||.|||
RBAM_022780__    401 TTGAAACAGAGCCGGGAATTAAAGGCGACACGGCGTCAGGCGGCACGAAA    450

BSNT_03650___    451 CCTGCGAAAACTGAAACCGGGCTTGTTGTAAACGTGCCGTTCTTTGTGAA    500
                     |||||.|||||.|||||.||.|||||.||||||||.|||||.||.|||||
RBAM_022780__    451 CCTGCCAAAACGGAAACAGGTCTTGTCGTAAACGTACCGTTTTTCGTGAA    500

BSNT_03650___    501 TGAAGGCGACACACTTGTTGTCAATACATCAGACGGTTCTTACGTTTCAA    550
                     .||||||||.||.||.|||||.||||||||||||||.||||||||.||||
RBAM_022780__    501 CGAAGGCGATACGCTGGTTGTAAATACATCAGACGGCTCTTACGTGTCAA    550

BSNT_03650___    551 GAGCATAG    558
                     ||||.|||
RBAM_022780__    551 GAGCGTAG    558


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