Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03647 and RBAM_022750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:55
# Commandline: needle
# -asequence dna-align/BSNT_03647___spoIIIAB.1.9828.seq
# -bsequence dna-align/RBAM_022750___spoIIIAB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03647___spoIIIAB-RBAM_022750___spoIIIAB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03647___spoIIIAB-RBAM_022750___spoIIIAB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03647___spoIIIAB
# 2: RBAM_022750___spoIIIAB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 523
# Identity: 406/523 (77.6%)
# Similarity: 406/523 (77.6%)
# Gaps: 14/523 ( 2.7%)
# Score: 1554.0
#
#
#=======================================
BSNT_03647___ 1 ATGCTGAAGCTGCTGGGCGCTGTATTCATTGTGGTAGCGACAACATGGAC 50
|||||||||||..||||.||.||.||.|||.||..||||||.||||||||
RBAM_022750__ 1 ATGCTGAAGCTTTTGGGTGCCGTGTTTATTCTGACAGCGACGACATGGAC 50
BSNT_03647___ 51 AGGTTTTGAGATGGCGAAGATTTATACAGAACGGCCGCGGCAAATCCGCC 100
.||.||||||||.||.||.||.||||.||||.|||||.||||.|||||.|
RBAM_022750__ 51 GGGATTTGAGATCGCCAAAATGTATATAGAAAGGCCGAGGCAGATCCGTC 100
BSNT_03647___ 101 AGCTGCGTGCGGCGCTTCAATCCCTCGAGGCTGAAATCATGTACGGCCAT 150
|||||||.||||||||.|||||.||.||.||.||||||||||.|||.|||
RBAM_022750__ 101 AGCTGCGCGCGGCGCTCCAATCGCTTGAAGCGGAAATCATGTTCGGGCAT 150
BSNT_03647___ 151 ACACCGCTTCATACTGCTTCACAGCAGATTGCCAAACAGCTCGCACAGCC 200
||||||||.|||||.||.||....||.||||||..||||||..|..|.||
RBAM_022750__ 151 ACACCGCTGCATACCGCCTCGGGACAAATTGCCGCACAGCTTTCCAAACC 200
BSNT_03647___ 201 TGTTTCAGCTCTTTTTTC-CGCATTCAGTGATCA----GCTGGACAAGGG 245
|||.|| |.|.||.|||| .||.||||| || |||.||..||||
RBAM_022750__ 201 TGTATC-GTTATTGTTTCAAGCTTTCAG----CAGAAGGCTAGAGCAGGG 245
BSNT_03647___ 246 AAGTGATTCCGCGAAAACGGCGTGGGAGCAAAGCTTAAAGAAGGTA--TG 293
|||.||||||||.||||||||.|||||.||.|||||.||.|| || ||
RBAM_022750__ 246 AAGCGATTCCGCCAAAACGGCTTGGGAACAGAGCTTGAAAAA--TAACTG 293
BSNT_03647___ 294 GGATACCCTGTCTTTGAAAAAAAGCGAATACGAAGTGCTGAAGCAGTTTG 343
|....||.||.|..||||||||||||||||.||.||.||||||||.||.|
RBAM_022750__ 294 GTCGTCCATGGCGATGAAAAAAAGCGAATATGATGTACTGAAGCAATTCG 343
BSNT_03647___ 344 GCGAGACGCTCGGGATTCATGATCGAATCTCTCAGCAAAAGCACATCAAG 393
|.||||||||||||.|.|||||.||..|.||||||||.||.||.||||||
RBAM_022750__ 344 GAGAGACGCTCGGGCTCCATGACCGTGTTTCTCAGCAGAAACATATCAAG 393
BSNT_03647___ 394 CTGGCGCTGTCACATTTGGAAGCCTCTGAAGCGGATGCTGAGCAGGCGCA 443
||.|||||..|||||||||||||..|.|||||||||||.|..|.||||||
RBAM_022750__ 394 CTTGCGCTTACACATTTGGAAGCGGCGGAAGCGGATGCCGGACGGGCGCA 443
BSNT_03647___ 444 AGCGAAAAATGAAAAGATGATAAAAAGTTTGGGCTTTTTAGCGGGCTTGT 493
.||||||||||||||.|||.|.|||||.||.||.||||||||.||..|||
RBAM_022750__ 444 GGCGAAAAATGAAAAAATGGTGAAAAGCTTAGGATTTTTAGCCGGACTGT 493
BSNT_03647___ 494 TACTCATTCTTCTATTGATGTAA 516
|||||||||||||||||||||||
RBAM_022750__ 494 TACTCATTCTTCTATTGATGTAA 516
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