Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03645 and RBAM_022730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:55
# Commandline: needle
# -asequence dna-align/BSNT_03645___spoIIIAD.1.9828.seq
# -bsequence dna-align/RBAM_022730___spoIIIAD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03645___spoIIIAD-RBAM_022730___spoIIIAD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03645___spoIIIAD-RBAM_022730___spoIIIAD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03645___spoIIIAD
# 2: RBAM_022730___spoIIIAD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 402
# Identity: 249/402 (61.9%)
# Similarity: 249/402 (61.9%)
# Gaps: 99/402 (24.6%)
# Score: 1019.0
#
#
#=======================================
BSNT_03645___ 1 TTGCAGATTGACATTGTTCAAATTGTAGGTTTAGGGCTGATCGCCACCTT 50
RBAM_022730__ 0 -------------------------------------------------- 0
BSNT_03645___ 51 CCTTTCTTTAATTGTAAAAGAACAAAAGCCGACTTTTGCGTTTTTAATCG 100
.|.||.|
RBAM_022730__ 1 -------------------------------------------ATGATTG 7
BSNT_03645___ 101 TCGTTTTTGCCGGATGTGCCATTTTTCTTTATTTGGTAGACCAAATCTAC 150
||||.||...|||.||.|..||.|||||||||.|..|.|||||.||.|||
RBAM_022730__ 8 TCGTCTTCAGCGGCTGCGTGATCTTTCTTTATCTCATCGACCAGATTTAC 57
BSNT_03645___ 151 GACATTATTCGAATGATAGAAAAAATTGCGATTAATGCAAATGTCAACAT 200
||||||||..||||||||||||||||.||..|.||||||||||||||.||
RBAM_022730__ 58 GACATTATCAGAATGATAGAAAAAATAGCCGTCAATGCAAATGTCAATAT 107
BSNT_03645___ 201 GGTCTATGTTGAAACCATTTTAAAGATTATCGGAATCGCCTATATTGCTG 250
|||||||||.||||||||||||||.||||||||.||||||||.||.||||
RBAM_022730__ 108 GGTCTATGTGGAAACCATTTTAAAAATTATCGGCATCGCCTACATCGCTG 157
BSNT_03645___ 251 AATTCGGGGCACAGCTCACAAAAGATGCCGGTCAAGGAGCCATCGCCTCG 300
|||||||.||.|||||.|||||.|||||.||.||.|||||.||.||.|||
RBAM_022730__ 158 AATTCGGAGCGCAGCTGACAAAGGATGCGGGCCAGGGAGCGATTGCTTCG 207
BSNT_03645___ 301 AAAATAGAATTGGCGGGGAAAATTTTAATACTCGTAATGGCTGTGCCTAT 350
||||||||..||||.||.||||||||.|||||.||||||||.|||||.||
RBAM_022730__ 208 AAAATAGAGCTGGCCGGAAAAATTTTGATACTGGTAATGGCCGTGCCGAT 257
BSNT_03645___ 351 TTTAACCGTCATTATCGAAACGATTCTCGGACTTATACCTTCTATGTCAT 400
..|.|||||||||||.||||||||||||||||||||.|||||| ||.
RBAM_022730__ 258 ACTCACCGTCATTATTGAAACGATTCTCGGACTTATTCCTTCT-TGA--- 303
BSNT_03645___ 401 AA 402
RBAM_022730__ 303 -- 303
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