Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03638 and RBAM_022690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:55
# Commandline: needle
# -asequence dna-align/BSNT_03638___spoIIIAH.1.9828.seq
# -bsequence dna-align/RBAM_022690___spoIIIAH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03638___spoIIIAH-RBAM_022690___spoIIIAH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03638___spoIIIAH-RBAM_022690___spoIIIAH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03638___spoIIIAH
# 2: RBAM_022690___spoIIIAH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 670
# Identity: 518/670 (77.3%)
# Similarity: 518/670 (77.3%)
# Gaps: 32/670 ( 4.8%)
# Score: 2027.5
#
#
#=======================================
BSNT_03638___ 1 ATGCTTAAAAAACAAACCGTTTGGCTATTAACAATGCTCAGTCTTGTCGT 50
|||||.|||||||||||.||||||||.|||||||||||||||||.|||||
RBAM_022690__ 1 ATGCTGAAAAAACAAACGGTTTGGCTTTTAACAATGCTCAGTCTCGTCGT 50
BSNT_03638___ 51 GGTGTTAAGCGTCTACTATATCATGTCGCCGGAAAGCAAAAACGCCGTGC 100
|||.|||||.||.||.|||||.||||||||||||||||||||.|||||||
RBAM_022690__ 51 GGTATTAAGTGTTTATTATATTATGTCGCCGGAAAGCAAAAATGCCGTGC 100
BSNT_03638___ 101 AGATGCAAAGTGAAAAAAGCGCGTCTGACAGCGGAGAGGTCGCAACTGAA 150
|||||.||||.|||||||| |||||||||.|||||.||||||
RBAM_022690__ 101 AGATGAAAAGCGAAAAAAG---------CAGCGGAGAAGTCGCCACTGAA 141
BSNT_03638___ 151 AAAGCGCCTGCCAAGCAAGACACGAAGGAAAAAAGCGGTACAGAAACTGA 200
|||.||||||| .|..||.|||||.||.||.|||||.|..|..||.||
RBAM_022690__ 142 AAAACGCCTGC---TCCTGAAACGAAAGATAAGAGCGGAAGCGGCACGGA 188
BSNT_03638___ 201 AAAAGGAAAAGAAGATGGAACAAAGGGAACGAAAGATTCATCA--GCA-- 246
|||||||||.||.|||||.|||||||||||||| |.| |||
RBAM_022690__ 189 ------AAAAGAAGACGGCACAAAAGGAACGAAAGATTC-TAAAGGCACA 231
BSNT_03638___ 247 ------GACAAGGAAACATCCGCTGAAGCCAGTGAAAAA---GGAACTGT 287
||.||.||||||||.||.|||||....||.||| |||.|.||
RBAM_022690__ 232 AAAGAGGATAAAGAAACATCAGCCGAAGCATCGGACAAAGACGGATCGGT 281
BSNT_03638___ 288 TGTTACGGAAACAGCCGATGATGATCTGTTTACAACGTACCGTCTTGATT 337
.|..||.||||||||.|||||..|..|.||||||.|.|||||..|.||..
RBAM_022690__ 282 CGCCACAGAAACAGCTGATGAAAACTTATTTACAGCATACCGCATGGAGC 331
BSNT_03638___ 338 TAGAAGATGCCAGAAGCAAAGAAAGAGAAGAGCTGAATGCCATTGTGTCA 387
|.|||||.||.||||||||||||||.|||.||.|.||...||||||.|||
RBAM_022690__ 332 TTGAAGACGCGAGAAGCAAAGAAAGGGAACAGTTAAACAGCATTGTTTCA 381
BSNT_03638___ 388 AGCGATGATGCAACAGCCAAGGAGAAAAGCGAAGCATACGATAAAATGAC 437
|||||||||||.||.||.|||||.|||||||||||.||||||||||||||
RBAM_022690__ 382 AGCGATGATGCGACCGCAAAGGAAAAAAGCGAAGCCTACGATAAAATGAC 431
BSNT_03638___ 438 GGCTCTCAGTGAAGTGGAAGGAACAGAAAAACAGCTTGAAACGCTGATTA 487
|||.||.||..|.|..|||||.||.|||||||||||.|||||||||||||
RBAM_022690__ 432 GGCGCTGAGCAATGCTGAAGGGACGGAAAAACAGCTGGAAACGCTGATTA 481
BSNT_03638___ 488 AAACACAAGGTTACGAGGATGCGCTTGTTAATGCTGAAGGAGATAAAATC 537
||||||||||.|||.|.||||||||.||..|||||||||||||.||||||
RBAM_022690__ 482 AAACACAAGGCTACAAAGATGCGCTCGTGGATGCTGAAGGAGACAAAATC 531
BSNT_03638___ 538 AATATTACAGTCAAATCAGACAAACACTCCAAATCGAAGGCGACAGCCAT 587
||.|||||.||||..||.||||||||.||.||..|.||.||..|.||.||
RBAM_022690__ 532 AACATTACCGTCATGTCTGACAAACATTCAAACGCAAAAGCTTCCGCTAT 581
BSNT_03638___ 588 TATAGACCTTGTGGCAAAAGAAATCAAAACAATGAAAGATGTCGCTGTCA 637
.||.|||||.||||.||||||||||||.||.||||||||.|||||.||||
RBAM_022690__ 582 CATTGACCTGGTGGAAAAAGAAATCAAGACGATGAAAGACGTCGCCGTCA 631
BSNT_03638___ 638 CATTTGAACCATCCAAGTAA 657
|.||||||||..|.||||||
RBAM_022690__ 632 CGTTTGAACCGACAAAGTAA 651
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