Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03633 and RBAM_022680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence dna-align/BSNT_03633___accB.1.9828.seq
# -bsequence dna-align/RBAM_022680___accB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03633___accB-RBAM_022680___accB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03633___accB-RBAM_022680___accB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03633___accB
# 2: RBAM_022680___accB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 499
# Identity: 379/499 (76.0%)
# Similarity: 379/499 (76.0%)
# Gaps: 38/499 ( 7.6%)
# Score: 1434.0
#
#
#=======================================
BSNT_03633___ 1 ATGTTAAATATCAAAGAAATCCACGAGCTGATTAAAGCAATTGACGAGTC 50
||||||||.|||||.|||||.||.||.|||||.|||..|||.||.||.||
RBAM_022680__ 1 ATGTTAAAAATCAACGAAATTCATGAACTGATAAAAAGAATCGATGAATC 50
BSNT_03633___ 51 TACAATTGACGAATTCGTATATGAAAATGAAGGTGTA--TCCTTAAAACT 98
|.|.||.||||||||.||.||.||||.||||||.||| || |.|||||
RBAM_022680__ 51 TTCCATCGACGAATTTGTTTACGAAATTGAAGGCGTAAGTC--TCAAACT 98
BSNT_03633___ 99 GAAAAAACACGAA--GCAGGC----------ACGGTTCAAGTCATGCAGC 136
|||||||.|.||| ||.||| ||||..||||.| |
RBAM_022680__ 99 GAAAAAAAATGAAGCGCCGGCAGTGAATGTAACGGGACAAGCC------C 142
BSNT_03633___ 137 AGGC---ACCGGCAGCACCTGTACAAGCACAGGCTCCGCAGGCAGTTCAG 183
|.|| .||.||.|| .||| ||||..|||||||||||.|...|.
RBAM_022680__ 143 AAGCCGTTCCCGCCGC----TTAC--GCACCTGCTCCGCAGGCTGCAAAA 186
BSNT_03633___ 184 CCGCAAGCGCAGCAAGCAGCGGCACCTGCCCAAGAAGCACCAAAGCAAGA 233
|||.||||| || .|.|||.||.|||||.||.|||||.||.||.|||||
RBAM_022680__ 187 CCGGAAGCG-AG--TGAAGCCGCTCCTGCTCAGGAAGCGCCGAAACAAGA 233
BSNT_03633___ 234 TGAGAATCTGCATAAAATCACTTCACCAATGGTAGGAACATTTTATGCTT 283
.||.||.|||||.|||||.||.||.||.|||||.|||||.||||||||||
RBAM_022680__ 234 CGAAAACCTGCACAAAATTACGTCTCCGATGGTCGGAACGTTTTATGCTT 283
BSNT_03633___ 284 CTTCATCACCGGAAGCTGGCCCGTATGTAA--CAGCCGGTTCAAAAGTAA 331
|||||||.||||||||.|||||.||.|||| || .|||||||||||.|
RBAM_022680__ 284 CTTCATCGCCGGAAGCCGGCCCTTACGTAAACCA--AGGTTCAAAAGTGA 331
BSNT_03633___ 332 ATGAAAACACAGTTGTCTGCATTGTAGAAGCGATGAAGCTTTTCAACGAA 381
..|||||.||||||||.||.||.||||||||.|||||.||.||.|||||.
RBAM_022680__ 332 GCGAAAATACAGTTGTTTGTATCGTAGAAGCAATGAAACTCTTTAACGAG 381
BSNT_03633___ 382 ATCGAAGCAGAAGTGAAAGGCGAAATCGTTGAAGTATTAGTAGAAAACGG 431
||.|||||.|||||.|||||.||||||||||||||.|||||.||||||||
RBAM_022680__ 382 ATTGAAGCCGAAGTAAAAGGAGAAATCGTTGAAGTGTTAGTTGAAAACGG 431
BSNT_03633___ 432 CCAGCTGGTCGAATACGGACAACCTCTATTTCTTGTAAAAGCGGAGTAA 480
||||||||||||||||||||||||||||||||||||||||||.||||||
RBAM_022680__ 432 CCAGCTGGTCGAATACGGACAACCTCTATTTCTTGTAAAAGCTGAGTAA 480
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