Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03632 and RBAM_022670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence dna-align/BSNT_03632___accC.1.9828.seq
# -bsequence dna-align/RBAM_022670___accC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03632___accC-RBAM_022670___accC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03632___accC-RBAM_022670___accC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03632___accC
# 2: RBAM_022670___accC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1353
# Identity: 1138/1353 (84.1%)
# Similarity: 1138/1353 (84.1%)
# Gaps: 0/1353 ( 0.0%)
# Score: 4830.0
#
#
#=======================================
BSNT_03632___ 1 ATGATTAAAAAGCTATTGATCGCCAACAGAGGAGAAATTGCTGTCAGAAT 50
|||||||||||||||||||||||||||.||||||||||.||.||||||||
RBAM_022670__ 1 ATGATTAAAAAGCTATTGATCGCCAACCGAGGAGAAATCGCCGTCAGAAT 50
BSNT_03632___ 51 CATCAGAGCCTGCAGAGAGCTCGGAATTGAGACTGTCGCTGTTTATTCAG 100
||||.|.|||||||.||||||.||.|||||.|||||.||.||||||||.|
RBAM_022670__ 51 CATCCGGGCCTGCAAAGAGCTGGGCATTGAAACTGTAGCCGTTTATTCTG 100
BSNT_03632___ 101 AAGCTGATAAAGATGCCCTTCATGTTCAAATGGCCGATGAAGCTTTTTGT 150
|.||.||||||||.|||||.|||||.||||||||||||||.|||||||||
RBAM_022670__ 101 AGGCAGATAAAGACGCCCTGCATGTCCAAATGGCCGATGAGGCTTTTTGT 150
BSNT_03632___ 151 ATCGGACCGAAAGCATCAAAAGACAGCTATTTAAACGTTACAAATATTGT 200
|||||.||||||.||||||||||.|||||||||||.||.||.||.||.||
RBAM_022670__ 151 ATCGGGCCGAAAACATCAAAAGAAAGCTATTTAAATGTAACGAACATCGT 200
BSNT_03632___ 201 GAGTGTTGCAAAGCTGACTGGCACGGACGCCATTCATCCGGGATACGGAT 250
.||.||.|||||||||||.||||||||.||.|||||||||||||||||||
RBAM_022670__ 201 CAGCGTCGCAAAGCTGACCGGCACGGATGCGATTCATCCGGGATACGGAT 250
BSNT_03632___ 251 TTTTAGCTGAAAATGCTGATTTCGCTGAATTATGTGAAGAAGTGAATGTC 300
|||||||||||||.||.||.||.||.||..|.||.||.|||.|.||.||.
RBAM_022670__ 251 TTTTAGCTGAAAACGCCGACTTTGCCGAGCTGTGCGAGGAATTAAACGTA 300
BSNT_03632___ 301 ACGTTTGTCGGCCCGAGCGCTGACGCCATTTCAAAAATGGGAACAAAAGA 350
||||||||||||||.|..||||||||||||||||||||||||||||||||
RBAM_022670__ 301 ACGTTTGTCGGCCCTACGGCTGACGCCATTTCAAAAATGGGAACAAAAGA 350
BSNT_03632___ 351 CGTTGCGCGGGAAACGATGAAACAGGCCGGCGTGCCAATCGTACCGGGTT 400
..|.|||||.||.||||||.|.|.|||.||||||||.||.||.||.||||
RBAM_022670__ 351 TATCGCGCGCGACACGATGCAGCTGGCGGGCGTGCCGATTGTGCCCGGTT 400
BSNT_03632___ 401 CACAGGGAATTATAGAAAATGTGGAAGAAGCGGTTTCGCTTGCTAATGAA 450
||.|.|||||.|||.|||||..|||||||||||||||||||||...||||
RBAM_022670__ 401 CAAAAGGAATCATAAAAAATACGGAAGAAGCGGTTTCGCTTGCAGGTGAA 450
BSNT_03632___ 451 ATTGGGTATCCTGTAATTATAAAAGCCACCGCAGGCGGAGGCGGAAAAGG 500
||||||||||||||.||||||||||||||.||.|||||||||||||||||
RBAM_022670__ 451 ATTGGGTATCCTGTCATTATAAAAGCCACTGCGGGCGGAGGCGGAAAAGG 500
BSNT_03632___ 501 AATTAGGGTTGCTCGCACTGAAGAGGAACTGATTAATGGCATTAAGATTA 550
.||..||||.||.|||||.|||||.||||||||.||.||||||.||||||
RBAM_022670__ 501 CATCCGGGTCGCACGCACAGAAGAAGAACTGATCAAAGGCATTGAGATTA 550
BSNT_03632___ 551 CACAGCAGGAAGCGGCAACTGCATTCGGAAATCCAGGTGTATACATCGAA 600
|.|||||||||||.||.||.||||||||||||||.|||||.||||||||.
RBAM_022670__ 551 CCCAGCAGGAAGCCGCTACGGCATTCGGAAATCCGGGTGTGTACATCGAG 600
BSNT_03632___ 601 AAATACATAGAAGATTTTCGCCACGTTGAGATCCAAGTGCTTGCTGATAA 650
||.||||||||||||||.|||||.|||||.||.||.||||||||.|||||
RBAM_022670__ 601 AAGTACATAGAAGATTTCCGCCATGTTGAAATTCAGGTGCTTGCGGATAA 650
BSNT_03632___ 651 CTACGGAAATACGATCCATTTGGGCGAACGCGACTGCTCGATCCAAAGAC 700
.||||||||.|||||||||.|.||.||.||.|||||.||.||||||||||
RBAM_022670__ 651 TTACGGAAACACGATCCATCTCGGAGAGCGTGACTGTTCTATCCAAAGAC 700
BSNT_03632___ 701 GCCTGCAAAAGCTTTTGGAAGAATCACCATCTCCTGCCCTTGATTCAGAA 750
|.||||||||.|||.|.|||||.|||||.||.|||||.||||||||.|||
RBAM_022670__ 701 GTCTGCAAAAACTTCTTGAAGAGTCACCGTCACCTGCGCTTGATTCTGAA 750
BSNT_03632___ 751 ATCAGGGAGCAAATGGGAGATGCAGCGGTAAAGGCTGCAAAAGCGGTTGG 800
|||||||||||.|||||.||.|||||||||||.||.||.||.||.||.||
RBAM_022670__ 751 ATCAGGGAGCAGATGGGTGAAGCAGCGGTAAAAGCAGCGAAGGCCGTCGG 800
BSNT_03632___ 801 CTATACAGGTGCTGGAACAGTTGAATTTATCTATGACTACAATGAACAGC 850
.||.||.||.||.||.|||||.|||||.|||||||||||||..|||||||
RBAM_022670__ 801 TTACACGGGAGCCGGCACAGTAGAATTCATCTATGACTACAGAGAACAGC 850
BSNT_03632___ 851 GCTATTACTTCATGGAAATGAACACGAGAATTCAGGTAGAGCACCCAGTC 900
||||.|||||||||||||||||||||.|.|||||.||||||||.||.|||
RBAM_022670__ 851 GCTACTACTTCATGGAAATGAACACGCGTATTCAAGTAGAGCATCCTGTC 900
BSNT_03632___ 901 ACAGAAATGGTGACGGGAACTGACCTGATCAAGGAACAAATCAAAGTGGC 950
||||||||||||||||||||.||.||||||||.|||||.|||||||||||
RBAM_022670__ 901 ACAGAAATGGTGACGGGAACGGATCTGATCAAAGAACAGATCAAAGTGGC 950
BSNT_03632___ 951 ATCAGGAATGGAACTGAGCCTCAAGCAAGAGGATGTTGAATTTGAAGGCT 1000
|||.|||..|||.||....||||..||.||.||.|||||||||.|.||||
RBAM_022670__ 951 ATCCGGACAGGAGCTTTCGCTCAGACAGGAAGACGTTGAATTTAACGGCT 1000
BSNT_03632___ 1001 GGGCCATCGAATGCCGAATCAACGCAGAAAACCCAAGTAAAAATTTCATG 1050
||||.||.||||||||.||||||||.|||||.||....|||||.||||||
RBAM_022670__ 1001 GGGCGATTGAATGCCGCATCAACGCTGAAAATCCTGCGAAAAACTTCATG 1050
BSNT_03632___ 1051 CCGTCACCTGGTGAAATTAAAATGTACCTGCCTCCTGGCGGTCTTGGTGT 1100
||.|||||.|||.|||||||.|||||||||||.||.|||||.||.||.||
RBAM_022670__ 1051 CCTTCACCCGGTAAAATTAACATGTACCTGCCGCCGGGCGGACTCGGCGT 1100
BSNT_03632___ 1101 CCGTGTCGATTCAGCTGCGTACCCTGGCTATTCCATCCCACCGTACTATG 1150
.||.||.||||||||.||.||.||.||||||||.|||||.||||||||||
RBAM_022670__ 1101 ACGCGTGGATTCAGCCGCATATCCCGGCTATTCGATCCCGCCGTACTATG 1150
BSNT_03632___ 1151 ACAGCATGATTGCAAAGGTCATCACATACGGAAAAACGAGGGATGAAGCG 1200
||||.||||||||.||.||||||||||||||||.||||.|.|||||.||.
RBAM_022670__ 1151 ACAGTATGATTGCTAAAGTCATCACATACGGAACAACGCGTGATGAGGCA 1200
BSNT_03632___ 1201 ATTGCCCGCATGAAGCGCGCATTGAGCGAATTCGTCATCGAAGGCATTGA 1250
.|.||.||.|||||.|||||..|||||||||||||.||.|||||.|||||
RBAM_022670__ 1201 GTCGCACGGATGAAACGCGCGCTGAGCGAATTCGTGATTGAAGGTATTGA 1250
BSNT_03632___ 1251 GACAACAATCCCTTTCCATTTAAAACTGCTTGAACACGAAACATTTGTGA 1300
.||.||.||.||.||||||||.||||||||||||||||||||||||||.|
RBAM_022670__ 1251 AACGACGATTCCGTTCCATTTGAAACTGCTTGAACACGAAACATTTGTCA 1300
BSNT_03632___ 1301 GCGGAGAGTTTAATACGAAATTTTTAGAAACATATGATGTAATGGGCTCA 1350
||||||||||||||||.||.||||||||||||||||||||||||||||||
RBAM_022670__ 1301 GCGGAGAGTTTAATACAAAGTTTTTAGAAACATATGATGTAATGGGCTCA 1350
BSNT_03632___ 1351 TAA 1353
|||
RBAM_022670__ 1351 TAA 1353
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