Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03624 and RBAM_022640

See Amino acid alignment / Visit BSNT_03624 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:54
# Commandline: needle
#    -asequence dna-align/BSNT_03624___folD.1.9828.seq
#    -bsequence dna-align/RBAM_022640___folD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03624___folD-RBAM_022640___folD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03624___folD-RBAM_022640___folD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03624___folD
# 2: RBAM_022640___folD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 856
# Identity:     706/856 (82.5%)
# Similarity:   706/856 (82.5%)
# Gaps:           8/856 ( 0.9%)
# Score: 2920.0
# 
#
#=======================================

BSNT_03624___      1 ATGACTGCAACAATCATCGACGGAAAAGAAACGGCTAGAGAAAAACGCGA     50
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
RBAM_022640__      1 ATGACTGCAACAATCATCGACGGAAAAGAAACGGCTAAAGAAAAACGCGA     50

BSNT_03624___     51 ACAATTGGCAAAAGAGGTAGAAGAGCTTAAAAAGCAAGGCGTCACT-CCC     99
                     |||||||||||||||.|||||||||||.|||...|||||||| |.| ||.
RBAM_022640__     51 ACAATTGGCAAAAGAAGTAGAAGAGCTGAAAGCACAAGGCGT-AGTGCCT     99

BSNT_03624___    100 GGACTGGCGGTTATTTTGATTGGAGATGATCCTGCTTCTCACTCTTACGT    149
                     ||..|||||||.|||||.||.|||||.|||||.||||||...||.||.||
RBAM_022640__    100 GGCTTGGCGGTCATTTTAATCGGAGACGATCCCGCTTCTGTTTCATATGT    149

BSNT_03624___    150 GCGAGGAAAGAAAAAAGCGGCAGAAACAATGGGAATGAATTTCAAGCTCG    199
                     |..|||.|||||||||||.||.|||||||||||||||||.||.|||||.|
RBAM_022640__    150 GACAGGCAAGAAAAAAGCCGCTGAAACAATGGGAATGAAATTTAAGCTTG    199

BSNT_03624___    200 ATCAATTTGACAGCAGCCTCACAGAAGCTGAACTGCTTT---CCATTATT    246
                     |.|..||||||...|||.|.||.||.||.||   |||||   |..|.|||
RBAM_022640__    200 ACCGCTTTGACTCAAGCTTAACCGAGGCGGA---GCTTTTAACAGTGATT    246

BSNT_03624___    247 GATCAATATAACCAAGACCCTGAGTTTCATGGCATTCTCGTTCAGCTTCC    296
                     |||||.|||||.|||.|.||.||.||.||.|||||||||||.|||||.||
RBAM_022640__    247 GATCAGTATAATCAAAATCCGGAATTCCACGGCATTCTCGTCCAGCTGCC    296

BSNT_03624___    297 GCTCCCAGACCATATTTCTGAAAAAGCGGTGATCGAACGTATCTCCCCTG    346
                     ||||||.||.|||||||||||||||||.||.|||||.||.||||||||||
RBAM_022640__    297 GCTCCCGGATCATATTTCTGAAAAAGCCGTAATCGAGCGGATCTCCCCTG    346

BSNT_03624___    347 ATAAAGATGTAGACGGTTTTCATCCGTTAAACGTAGGGAAAATGCTGCTT    396
                     ||||.|||||.||||||||.||.||..|.|||||.|||||||||||||||
RBAM_022640__    347 ATAAGGATGTTGACGGTTTCCACCCTCTCAACGTCGGGAAAATGCTGCTT    396

BSNT_03624___    397 GGCGAAGATACGTTTCTTCCTTGCACGCCTCATGGAATTGTTGAGCTTTT    446
                     |||||||||||.||||||||.||||||||.||.||||||||.|||.|.||
RBAM_022640__    397 GGCGAAGATACATTTCTTCCATGCACGCCGCACGGAATTGTCGAGTTATT    446

BSNT_03624___    447 GAAGAAAATCAATATTGACCTTTCCGGTAAAGAGGTTGTTGTAGTCGGCC    496
                     |||.||.|..||..|.||.||||||||.|||||.||||||||||||||.|
RBAM_022640__    447 GAAAAAGACGAACGTAGATCTTTCCGGCAAAGAAGTTGTTGTAGTCGGAC    496

BSNT_03624___    497 GAAGCAACATTGTCGGCAAACCTGTCGGCCAGCTTTTATTAAATGAAAAC    546
                     |||||||.||||||||.|||||.|||||||||||..|..|.||.||||||
RBAM_022640__    497 GAAGCAATATTGTCGGTAAACCGGTCGGCCAGCTGCTGCTGAACGAAAAC    546

BSNT_03624___    547 GCGACGGTTACTTACTGTCATTCAAGAACAGAAAATATTACTGAACATAC    596
                     |||||.||.||.||.||.|||||..|.||..|||||||..||||.|||||
RBAM_022640__    547 GCGACCGTCACATATTGCCATTCCCGCACGAAAAATATGTCTGAGCATAC    596

BSNT_03624___    597 GAAAAAAGCGGACATCCTGGTGGTGGCAGTCGGCAGAGCCAACTTCATCA    646
                     |||||||||.||.||.||.|||||.||.|||||.|.|||.||||||||||
RBAM_022640__    597 GAAAAAAGCAGATATTCTTGTGGTAGCGGTCGGTAAAGCGAACTTCATCA    646

BSNT_03624___    647 GTGCAGACCAGATCAAAGAGGGCGCTGTTGTCATTGACGTCGGCGTTAAC    696
                     ..||.||.||.||||||||||||||..||||||||||.||||||||.|||
RBAM_022640__    647 AAGCTGATCAAATCAAAGAGGGCGCCATTGTCATTGATGTCGGCGTCAAC    696

BSNT_03624___    697 CGTCTGGAAAACGGAAAGCTTTGCGGAGACGTTGAATTTGAAGGGGCAAA    746
                     |||||.||||.||||||.||.||||||||||||.|.|||||.|..||.||
RBAM_022640__    697 CGTCTCGAAAGCGGAAAACTCTGCGGAGACGTTCAGTTTGATGAAGCGAA    746

BSNT_03624___    747 GGAAAAAGCGTCCTTCATCACGCCGGTTCCGGGCGGAGTAGGTCCGATGA    796
                     .||||||||.||.|||||.||||||||.||||||||||||||||||||||
RBAM_022640__    747 AGAAAAAGCATCTTTCATTACGCCGGTGCCGGGCGGAGTAGGTCCGATGA    796

BSNT_03624___    797 CCATCACGATGCTTGCGCATAATACTGTTAAATCTGCGAAACGTACGTTA    846
                     |||||||.|||||||||||||||||||||||||||||.|.||||||||||
RBAM_022640__    797 CCATCACAATGCTTGCGCATAATACTGTTAAATCTGCCAGACGTACGTTA    846

BSNT_03624___    847 TCATAG    852
                     ||||||
RBAM_022640__    847 TCATAG    852


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