Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03622 and RBAM_022620

See Amino acid alignment / Visit BSNT_03622 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:54
# Commandline: needle
#    -asequence dna-align/BSNT_03622.1.9828.seq
#    -bsequence dna-align/RBAM_022620___xseB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03622-RBAM_022620___xseB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03622-RBAM_022620___xseB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03622
# 2: RBAM_022620___xseB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     220/255 (86.3%)
# Similarity:   220/255 (86.3%)
# Gaps:           0/255 ( 0.0%)
# Score: 960.0
# 
#
#=======================================

BSNT_03622         1 ATGACAGACGTGAAAAAAAATGAAAACATGACATTTGAAGAAGCGATGAA     50
                     ||||||||....|||||||.||||.|..|||||||||||||.||||||||
RBAM_022620__      1 ATGACAGAAACCAAAAAAAGTGAAGAGCTGACATTTGAAGAGGCGATGAA     50

BSNT_03622        51 AGGGCTTGAGAGCATTGTATCAAAGCTTGAAGAGGGAGATGTGCCTCTAG    100
                     |||.|||||..|||||||..|||||||||||||.|||||.|||||.||.|
RBAM_022620__     51 AGGCCTTGAAGGCATTGTGGCAAAGCTTGAAGAAGGAGACGTGCCGCTGG    100

BSNT_03622       101 AGCAAGCCATTAACTATTTCCAAGAAGGCATGGCTCTGTCAAAAATGTGC    150
                     ||||.||.|||||.|||||.||.|||||.|||||.||.||||||||||||
RBAM_022620__    101 AGCAGGCGATTAATTATTTTCAGGAAGGGATGGCCCTTTCAAAAATGTGC    150

BSNT_03622       151 CATGAAAAGCTGCAAAAAGTCGAAAAGCAAATGGACTTCATTTTAAAAGA    200
                     |||||||||||.||..|.||||||||||||||||||||.|||||||||||
RBAM_022620__    151 CATGAAAAGCTTCAGCATGTCGAAAAGCAAATGGACTTTATTTTAAAAGA    200

BSNT_03622       201 AGACGGCGAACTGGCACCTTTCAGTGTTCAGGAGGAAGACGAAGGTGACA    250
                     ..||||||||||.|||||||||||.|||||||||||||||||||||||||
RBAM_022620__    201 TAACGGCGAACTTGCACCTTTCAGCGTTCAGGAGGAAGACGAAGGTGACA    250

BSNT_03622       251 AATAA    255
                     |||||
RBAM_022620__    251 AATAA    255


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