Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03621 and RBAM_022610
See
Amino acid alignment /
Visit
BSNT_03621 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence dna-align/BSNT_03621___yqiD.1.9828.seq
# -bsequence dna-align/RBAM_022610___yqiD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03621___yqiD-RBAM_022610___yqiD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03621___yqiD-RBAM_022610___yqiD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03621___yqiD
# 2: RBAM_022610___yqiD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 911
# Identity: 694/911 (76.2%)
# Similarity: 694/911 (76.2%)
# Gaps: 40/911 ( 4.4%)
# Score: 2542.5
#
#
#=======================================
BSNT_03621___ 1 GTGACAAATAAATTAACGA-GC-TTTCTGGCGGACCG-GAAAAAAAC-AA 46
||||||||||||.| .|| || |||.|.|| |.|| |.|||.||| .|
RBAM_022610__ 1 GTGACAAATAAACT--GGACGCATTTTTAGC--ATCGCGCAAACAACTGA 46
BSNT_03621___ 47 TTGAAAATCAGCTTTCTGTCTATACAGAAAAGCTTGATATGCCGGA---- 92
|||||.|.|||||||||.|.|||||||||..|||||..||||||||
RBAM_022610__ 47 TTGAACAGCAGCTTTCTTTGTATACAGAACGGCTTGCGATGCCGGAAACC 96
BSNT_03621___ 93 CTCATTAAAGAAATCTATGCTATATTCTCTACAGGCCGGCGGAAAGCGGT 142
||| ||.|||||||||||.||||||.|..|.||.|||||||||.||.
RBAM_022610__ 97 CTC----AAAAAATCTATGCTGTATTCTTTGGAAGCGGGCGGAAAGAGGC 142
BSNT_03621___ 143 TGCGGCCTCTGATTGTACTGGCTGTTTTAAATGCATATGGAAAAAGCGAA 192
||||.||.||..|.||..|.||.|||.|.|||||.||.||||||...|||
RBAM_022610__ 143 TGCGCCCCCTCGTCGTCTTAGCCGTTCTGAATGCTTACGGAAAAGATGAA 192
BSNT_03621___ 193 AAAGACGGCATTCCGGTGGGCTGTGCTGTCGAAATGATTCACACGTATTC 242
||||||||.||||||||.||.||.|||||||||||||||||.||||||||
RBAM_022610__ 193 AAAGACGGGATTCCGGTCGGGTGCGCTGTCGAAATGATTCATACGTATTC 242
BSNT_03621___ 243 GTTAATTCATGATGATCTTCCATGCATGGATGATGACGATTTGCGCCGCG 292
.|||||.|||||||||||.||.||||||||.|||||.|||.|||||||.|
RBAM_022610__ 243 TTTAATCCATGATGATCTGCCTTGCATGGACGATGATGATCTGCGCCGGG 292
BSNT_03621___ 293 GGAAGCCGACAAACCATAAAGTGTTTGGTGAAGCGACGGCAGTATTAGCG 342
|.|||||.||||||||||||||.||.||.||||||.|.||.|||||.||.
RBAM_022610__ 293 GAAAGCCCACAAACCATAAAGTCTTCGGAGAAGCGGCAGCCGTATTGGCC 342
BSNT_03621___ 343 GGTGACGGGCTGCTCACAGAAAGCTTTAAGCTGATTACCTCCCACGTGTC 392
||.||||||||.||.||||||||||||||..||||.||.||.||.|||||
RBAM_022610__ 343 GGAGACGGGCTTCTGACAGAAAGCTTTAAATTGATCACATCTCATGTGTC 392
BSNT_03621___ 393 AGACGAGGTGTCAGCAGAAAAGCGCCTGCGGCTTGTGAATGAACTGATTT 442
.||.|.|||.|||||||||||.||.||.||.||.||..||||.|||| |
RBAM_022610__ 393 TGAGGCGGTTTCAGCAGAAAAACGGCTCCGTCTCGTCGATGAGCTGA--T 440
BSNT_03621___ 443 CA--GCGGCAGGCACCGAAGGCATGGTCGGTGGGCAAGTAGCTGATATGG 490
|| |||||.||.||.|||||.||||||||.||.||.|..||.||.||||
RBAM_022610__ 441 CAGCGCGGCGGGAACGGAAGGAATGGTCGGCGGACAGGCTGCCGACATGG 490
BSNT_03621___ 491 AAGCGGAA-AACCGACAAG----TCACGCTTGAAGAGCTCGAATCCATTC 535
|||||||| || ||| |.||||||||.|||||.||||||||.|
RBAM_022610__ 491 AAGCGGAACAA-----AAGCGGATAACGCTTGAGGAGCTGGAATCCATCC 535
BSNT_03621___ 536 ATGAACGGAAAACTGCCAAGCTCCTTGGCTTTTGTGTAATCGCCGGTGCT 585
|.||.||||||||.|||||||||||.||.||||..||.|..||.||.||.
RBAM_022610__ 536 ACGAGCGGAAAACGGCCAAGCTCCTCGGTTTTTCCGTGACGGCGGGCGCC 585
BSNT_03621___ 586 ATTTTGGCTGATGCGCCTGAGGAAGACATTGAAACACTGCGTACCTTCAG 635
||||||||.||||||||.|||||.||..|.||||..||.|||...|||||
RBAM_022610__ 586 ATTTTGGCAGATGCGCCGGAGGATGAAGTCGAAAAGCTCCGTTTGTTCAG 635
BSNT_03621___ 636 CAGCCACATTGGAATCGGATTTCAAATCAGAGACGATATTTTAGATTTAG 685
||||||.||.||.|||||||||||||||||||||||.||..|.|||.|.|
RBAM_022610__ 636 CAGCCATATCGGCATCGGATTTCAAATCAGAGACGACATCCTTGATATTG 685
BSNT_03621___ 686 AA-GGCAGTGAAGAGAAAATCGGCAAACGTGTCGGCTCGGATACCACAAA 734
|| |||| |||.|||||.||||||||||..||||||||.||..|..|.||
RBAM_022610__ 686 AAGGGCA-TGAGGAGAAGATCGGCAAACCGGTCGGCTCAGACTCGTCGAA 734
BSNT_03621___ 735 TGACAAATCGACATACCCGTCGCTTCTTTCATTGGAAGGGGCCAAACATA 784
|||.|||||.||.||.|||||||||.|..|..|.|||||.||.|||.| |
RBAM_022610__ 735 TGAAAAATCAACGTATCCGTCGCTTTTAACGCTTGAAGGCGCGAAAGA-A 783
BSNT_03621___ 785 AA--TTGGATGT-TCATATAAAAGAGGCGAAGC-GATTGATCGGCGGACT 830
|| ||| .|| ||||||.|..||||||||.| || |.|||.||||.||
RBAM_022610__ 784 AAGCTTG--CGTATCATATCAGCGAGGCGAAACAGA-TCATCAGCGGCCT 830
BSNT_03621___ 831 CTCTCTTCAAAAAGACCTTTTATATGAGCTTTGTGATTTAATTGCGGCAA 880
.||||||||.|||||.||..|..||||.||.|||||||||||.|||||.|
RBAM_022610__ 831 TTCTCTTCAGAAAGAACTGCTGCATGACCTCTGTGATTTAATCGCGGCGA 880
BSNT_03621___ 881 GAGATCACTAA 891
|||||||.|||
RBAM_022610__ 881 GAGATCATTAA 891
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.