Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03619 and RBAM_022600
See
Amino acid alignment /
Visit
BSNT_03619 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence dna-align/BSNT_03619___dxs.1.9828.seq
# -bsequence dna-align/RBAM_022600___dxs.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03619___dxs-RBAM_022600___dxs.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03619___dxs-RBAM_022600___dxs.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03619___dxs
# 2: RBAM_022600___dxs
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1916
# Identity: 1529/1916 (79.8%)
# Similarity: 1529/1916 (79.8%)
# Gaps: 28/1916 ( 1.5%)
# Score: 6033.5
#
#
#=======================================
BSNT_03619___ 1 TTGGATCTTTTATCAATACAGGACCCGTCGTTTTTAAAAAACATGTCCAT 50
|||||||||||||||||||||||||||||.|||.|.|||||.|||||.||
RBAM_022600__ 1 TTGGATCTTTTATCAATACAGGACCCGTCATTTCTTAAAAAGATGTCAAT 50
BSNT_03619___ 51 TGA-----TGAATTAGAGAAATTAAGTGATGAAATCCGTCAGTTT-TTAA 94
||| ||.| |||| .|.|||||.||.||||| ||.||| .|.|
RBAM_022600__ 51 TGAACAGCTGGA--AGAG---CTGAGTGAGGAGATCCG-CAATTTCCTCA 94
BSNT_03619___ 95 TTACAAGTTTATCCGCTTCCGGCGGCCACATCGGCCCAAACTTAGGTGTC 144
|.|||....|.||.||.||.||||||||.|||||.||.|||.|.||.||.
RBAM_022600__ 95 TCACATCGCTGTCTGCCTCTGGCGGCCATATCGGGCCGAACCTCGGGGTT 144
BSNT_03619___ 145 GTAGAGCTTACTGTTGCCCTGCATAAGGAATTTAACAGCCCGAAAGACAA 194
||.|||||.||..||||.||.||.||.||||||.||||.||||||||.||
RBAM_022600__ 145 GTCGAGCTGACAATTGCGCTTCACAAAGAATTTGACAGTCCGAAAGATAA 194
BSNT_03619___ 195 ATTTTTATGGGATGTAGGCCATCAGTCGTATGTCCATAAGCTGCTGACAG 244
|||||||||||||||.||.||||||||.|||||.|||||.|||.|.||.|
RBAM_022600__ 195 ATTTTTATGGGATGTCGGACATCAGTCCTATGTTCATAAACTGTTAACCG 244
BSNT_03619___ 245 GACGCGGAAAAGAATTTGCGACGCTT-CGCCAGTACAAAGGGCTTTGCGG 293
|||||||.||.||.||||..|| ||| |||||.||.||||||||||||||
RBAM_022600__ 245 GACGCGGCAAGGAGTTTGAAAC-CTTGCGCCAATATAAAGGGCTTTGCGG 293
BSNT_03619___ 294 ATTTCCAAAGCGGAGTGAAAGCGAGCACGATGTTTGGGAAACCGGGCACA 343
.||.||.||.||.||.||||||||.||.||.||.||||||||.||.||||
RBAM_022600__ 294 TTTCCCGAAACGCAGCGAAAGCGAACATGACGTATGGGAAACAGGCCACA 343
BSNT_03619___ 344 GCTCGACTTCTCTGTCAGGCGCGATGGGAATGGCAGCTGCCCGTGATATT 393
||||.||.||.||.||||||||||||||||||||.||.||||||||||||
RBAM_022600__ 344 GCTCAACCTCGCTCTCAGGCGCGATGGGAATGGCTGCCGCCCGTGATATT 393
BSNT_03619___ 394 AAAGGAACGGATGAATATATTATTCCGATCATTGGTGACGGCGCGCTGAC 443
||||||.||.|.||||||||.||.|||||.||.||.||||||||..|.||
RBAM_022600__ 394 AAAGGATCGAAAGAATATATCATCCCGATTATCGGAGACGGCGCTTTAAC 443
BSNT_03619___ 444 CGGCGGTATGGCGCTCGAAGCCCTTAACCACATCGGCGACGAGAAAAAAG 493
|||.||.||||||||.|||||.||.|||||.|||||.||.||||||||||
RBAM_022600__ 444 CGGAGGAATGGCGCTTGAAGCGCTGAACCATATCGGTGATGAGAAAAAAG 493
BSNT_03619___ 494 ACATGATTGTCATCCTTAATGATAATGAAATGAGTATTGCGCCAAACGTC 543
|||||||.||||||||.|||||||||||.|||||.||||||||.||.|||
RBAM_022600__ 494 ACATGATCGTCATCCTGAATGATAATGAGATGAGCATTGCGCCGAATGTC 543
BSNT_03619___ 544 GGTGCCATTCACTCTATGCTCGGACGGCTCCGCACTGCGGGGAAATACCA 593
||.||.|||||.||||||||.||||||||.|||||.||.||.|||||.||
RBAM_022600__ 544 GGGGCGATTCATTCTATGCTTGGACGGCTTCGCACGGCCGGCAAATATCA 593
BSNT_03619___ 594 GTGGGTCAAAGATGAGCTTGAATACTTATTTAAAAAGATTCCGGCAGTTG 643
.|||||.|||||.|||||||||||.||||||||....||.|||||.||.|
RBAM_022600__ 594 ATGGGTAAAAGACGAGCTTGAATATTTATTTAAGCGCATCCCGGCCGTCG 643
BSNT_03619___ 644 GGGGCAAGCTTGCCGCCACGGCGGAACGGGTCAAAGACAGCCTGAAATAC 693
|.||.||..|.||||||||.||.||||||.|.||||||||..|||||||.
RBAM_022600__ 644 GCGGAAAATTGGCCGCCACAGCTGAACGGATAAAAGACAGTTTGAAATAT 693
BSNT_03619___ 694 ATGCTCGTCTCCGGAATGTTTTTCGAGGAGCTCGGTTTTACGTATTTGGG 743
|||||.||.||.||.||||||||.||.|||||.||.|||||||||||.||
RBAM_022600__ 694 ATGCTTGTGTCAGGCATGTTTTTTGAAGAGCTGGGCTTTACGTATTTAGG 743
BSNT_03619___ 744 CCCAGTGGACGGACATTCTTATCATGAGCTGATTGAGAATCTTCAATACG 793
|||.||.|||||.|||||.||.||.||.|||.||||.||.||.|||||||
RBAM_022600__ 744 CCCGGTTGACGGTCATTCCTACCACGAACTGTTTGAAAACCTGCAATACG 793
BSNT_03619___ 794 CCAAAAAAACGAAAGGCCCTGTTCTTCTGCACGTCATTACGAAAAAAGGG 843
||||||||||||||||||||||.||..|.||.|||||.||||||||.||.
RBAM_022600__ 794 CCAAAAAAACGAAAGGCCCTGTCCTGTTACATGTCATCACGAAAAAGGGC 843
BSNT_03619___ 844 AAGGGGTACAAACCGGCTGAGACCGATACGATTGGGACATGGCATGGTAC 893
||.||.||.|||||||||||||||||.||.||.||.||||||||.||.||
RBAM_022600__ 844 AAAGGCTATAAACCGGCTGAGACCGACACAATCGGCACATGGCACGGAAC 893
BSNT_03619___ 894 CGGACCATATAAAATTAATACCGGTGACTTTGTAAAGCCGAAAGCCGCAG 943
.||.||.||||||||.|||||.|||||.||.||.||||||||||||||.|
RBAM_022600__ 894 GGGTCCGTATAAAATCAATACGGGTGATTTCGTCAAGCCGAAAGCCGCGG 943
BSNT_03619___ 944 CTCCTTCGTGGAGCGGTCTTGTCAGCGGAACTGTGCAGCGA-ATGGCGCG 992
|.|||||.||||||||.|||||||||||.||.|||||| || .||||.||
RBAM_022600__ 944 CGCCTTCATGGAGCGGACTTGTCAGCGGCACCGTGCAG-GAGCTGGCACG 992
BSNT_03619___ 993 CGAGGACGGAC-GCATTGTAGCCATTACGCCGGCTATGCCTGTCGGTTCA 1041
.||||| .||| |.|||||.||||||||.|||||.|||||.|||||.||.
RBAM_022600__ 993 TGAGGA-TGACAGAATTGTTGCCATTACACCGGCCATGCCGGTCGGCTCT 1041
BSNT_03619___ 1042 AAGCTTGAAGGCTTCGCAAAGGAATTCCCTGACCGGATGTTCGACGTAGG 1091
||.||.|||||.||.||.||.|||||||||||.||.|||||.||.||.||
RBAM_022600__ 1042 AAACTGGAAGGGTTTGCGAAAGAATTCCCTGAACGCATGTTTGATGTCGG 1091
BSNT_03619___ 1092 AATCGCAGAACAGCATGCCGCAACAATGGCTGCAGCTATGGCAATGCAGG 1141
||||||||||||||||||.||.||.|||||.||.|..|||||..|.||.|
RBAM_022600__ 1092 AATCGCAGAACAGCATGCGGCGACGATGGCGGCTGGAATGGCGCTCCAAG 1141
BSNT_03619___ 1142 GTATGAAGCCGTTTTTGGCGATTTACTCAACCTTCCTGCAAAGGGCATAT 1191
|.||||||||||||.|.||||||||.||.|||||..||||..||||.||.
RBAM_022600__ 1142 GCATGAAGCCGTTTCTTGCGATTTATTCGACCTTTTTGCAGCGGGCGTAC 1191
BSNT_03619___ 1192 GACCAAGTTGTTCATGACATCTGCCGCCAAAACGCTAATGTGTTTATTGG 1241
||.||.||.||.||||||||||||||.||||||||.|||||.|||||.||
RBAM_022600__ 1192 GATCAGGTCGTCCATGACATCTGCCGTCAAAACGCGAATGTATTTATCGG 1241
BSNT_03619___ 1242 AATTGACCGTGCAGGACTCGTTGGCGCTGATGGAGAGACACATCAAGGCG 1291
.||||||||.||.||..|.||.|||||.||.||.|||||.||||||||||
RBAM_022600__ 1242 CATTGACCGCGCCGGTTTGGTCGGCGCCGACGGGGAGACGCATCAAGGCG 1291
BSNT_03619___ 1292 TGTTTGATATTGCGTTTATGCGCCACATTCCAAACATGGTCTTAATGATG 1341
|.|||||.||.||.|||.||||.||.||.||||||.|.||.|||||||||
RBAM_022600__ 1292 TCTTTGACATCGCCTTTTTGCGGCATATACCAAACCTCGTTTTAATGATG 1341
BSNT_03619___ 1342 CCGAAAGACGAAAATGAAGGCCAGCACATGGTTCATACAGCACTTAGCTA 1391
|||||.||.|||||||||||||..||.|||||..|||||||.||||..||
RBAM_022600__ 1342 CCGAAGGATGAAAATGAAGGCCGCCATATGGTCAATACAGCCCTTAATTA 1391
BSNT_03619___ 1392 TGACGAAGGCCCGATAGCAATGCGTTTTCCGCGCGGAAACGGACTCGGCG 1441
|||.||.||||||||.||.|||||.||.||||||||||||||.|||||||
RBAM_022600__ 1392 TGAGGAGGGCCCGATCGCGATGCGCTTCCCGCGCGGAAACGGGCTCGGCG 1441
BSNT_03619___ 1442 TAAAAATGGATGAACAGTTGAAAACGATTCCGATCGGTACGTGGGAGGTG 1491
||||.||||||.||.||.|||||||.|||||||||||.||.|||||.|||
RBAM_022600__ 1442 TAAAGATGGATAAAGAGCTGAAAACCATTCCGATCGGAACATGGGAAGTG 1491
BSNT_03619___ 1492 TTGCGTCCAGGGAACGATGCTGTCATCTTAACATTCGGCACAACAATCGA 1541
.|.|||||.||.||.||.||.|||||.|||||||||||.||.||.||.||
RBAM_022600__ 1492 CTCCGTCCCGGAAAAGACGCGGTCATTTTAACATTCGGTACGACCATTGA 1541
BSNT_03619___ 1542 AATGGCGATTGAAGCAGCCGAAGAGCTGCAGAAAGAAGGCCTTTCCGTGC 1591
|||||||.|.|||||.||.|||||.|||||.|||||||||||.|||||||
RBAM_022600__ 1542 AATGGCGCTGGAAGCGGCTGAAGAACTGCAAAAAGAAGGCCTGTCCGTGC 1591
BSNT_03619___ 1592 GCGTTGTGAATGCGCGTTTTATTAAGCCGATTGATGAAAAGATGATGAAG 1641
|.||.|||||||||||.||.||.||.|||||||||.||.|.|||||||||
RBAM_022600__ 1592 GTGTCGTGAATGCGCGGTTCATAAAACCGATTGATAAACAAATGATGAAG 1641
BSNT_03619___ 1642 AGTATCCTAAAAGAAGGCTTGCCAATTTTAACAATTGAAGAAGCGGT-CT 1690
...||.||.||.|||||..||||.||||||||.||.||||||||.|| ||
RBAM_022600__ 1642 GCCATTCTTAATGAAGGTCTGCCGATTTTAACGATAGAAGAAGCCGTGCT 1691
BSNT_03619___ 1691 TAGAAGGCGGTTTCGGAAGCTCGATTTTAGAATTCGCTCATGATCAAGG- 1739
| ||||||||.|||||.|||.|||||.|.||||.|||||||||.|..||
RBAM_022600__ 1692 T-GAAGGCGGATTCGGCAGCACGATTCTTGAATACGCTCATGACCTCGGC 1740
BSNT_03619___ 1740 -TGAATATCATACTCCGATCGACAGAATGGGTATACCTGATCGGTTTATT 1788
|| ||||||||.|||||.|||||||||||.||.||.||.|||||||||
RBAM_022600__ 1741 ATG--TATCATACACCGATTGACAGAATGGGCATCCCAGACCGGTTTATT 1788
BSNT_03619___ 1789 GAACACGGAAGCGTAACGGCGCTTCTTAAGGAAATTGGACTGACAAAACA 1838
||||||||.||||||||.||.||.|||.|.|||||.||.||.||.|| .
RBAM_022600__ 1789 GAACACGGCAGCGTAACCGCCCTGCTTGAAGAAATCGGTCTCACGAA--G 1836
BSNT_03619___ 1839 GC--AGGTGGCAAATCGTATTAGATTACTGATGCCGTCAAAGACACACAA 1886
|| ||||....||.||.||.|.|.|.|||||||||.|.||||||||.||
RBAM_022600__ 1837 GCTGAGGTTATGAACCGGATCAAACTGCTGATGCCGCCGAAGACACATAA 1886
BSNT_03619___ 1887 AGGAATTGGATCATGA 1902
||||||||||||||||
RBAM_022600__ 1887 AGGAATTGGATCATGA 1902
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.