Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03614 and RBAM_022570
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:53
# Commandline: needle
# -asequence dna-align/BSNT_03614___recN.1.9828.seq
# -bsequence dna-align/RBAM_022570___recN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03614___recN-RBAM_022570___recN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03614___recN-RBAM_022570___recN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03614___recN
# 2: RBAM_022570___recN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1739
# Identity: 1376/1739 (79.1%)
# Similarity: 1376/1739 (79.1%)
# Gaps: 16/1739 ( 0.9%)
# Score: 5389.0
#
#
#=======================================
BSNT_03614___ 1 TTGTTAGCTGAACTATCGATTAAAAACTTTGCCATTATTGAGGAACTGAC 50
|||||||||||||||||.||.|||||||||||||||||.|||||||||||
RBAM_022570__ 1 TTGTTAGCTGAACTATCAATAAAAAACTTTGCCATTATAGAGGAACTGAC 50
BSNT_03614___ 51 GGTTTCTTTTGAACGCGGGCTTACGGTTTTAACAGGAGAAACCGGAGCCG 100
|.||||.||||||||.|||||.||.||..|.||.||||||||.||.||||
RBAM_022570__ 51 GATTTCGTTTGAACGGGGGCTCACCGTCCTGACGGGAGAAACAGGGGCCG 100
BSNT_03614___ 101 GCAAATCCATCATCATAGATGCCATTTCTCTTTTAGTCGGAGGCCGCGGA 150
||||.||.||.||.|||||.|||.||||.||.||||||||.||||||||.
RBAM_022570__ 101 GCAAGTCAATTATTATAGACGCCGTTTCCCTATTAGTCGGCGGCCGCGGC 150
BSNT_03614___ 151 TCATCTGAATTTGTTAGATATGGGGAAGCAAAAGCCGAACTTGAAGGGCT 200
||.|||||||||||..|.||.||.|||.||||.|||||.||||||||.||
RBAM_022570__ 151 TCGTCTGAATTTGTCCGTTACGGTGAAACAAAGGCCGAGCTTGAAGGACT 200
BSNT_03614___ 201 GTTTCTGTTGGAGAGCGGCCATCCTGTTTTAGGCGTATGCGCTGAGCAGG 250
||||||.|||||.|||||.|||||.|||||.|..||||||..||||||||
RBAM_022570__ 201 GTTTCTTTTGGACAGCGGTCATCCCGTTTTTGAAGTATGCCGTGAGCAGG 250
BSNT_03614___ 251 GAATCGACGTTTCAGACGAAATGATCGTCATGAGAAGGGATATCA--GCA 298
||||.||||..||.|||||.|||||.||||||||||||||.||.| ||.
RBAM_022570__ 251 GAATAGACGCATCTGACGACATGATTGTCATGAGAAGGGACATTAATGCC 300
BSNT_03614___ 299 CGAGCGGGAAAAGCGTTTGCCGTGTCAATGGCAAGCTTGTCACGATTGCT 348
.|| ||.||||||||.|||||||||||.||.||..|.||.||||||||.
RBAM_022570__ 301 GGA--GGAAAAAGCGTCTGCCGTGTCAACGGAAAATTAGTGACGATTGCG 348
BSNT_03614___ 349 TCGCTAAGAGAGATCGGCAGGCTTTTATTAGATATTCACGGACAGCACGA 398
.|..||||.||.||||||||.||||||||||||||||||||||||||.||
RBAM_022570__ 349 GCTTTAAGGGAAATCGGCAGACTTTTATTAGATATTCACGGACAGCATGA 398
BSNT_03614___ 399 TAACCAGCTGTTAATGGAAGACGAAAATCATCTCGAGCTTTTGGACAAGT 448
||||||||||||||||||.|||||.||.||..|.|||||.|||||||.||
RBAM_022570__ 399 TAACCAGCTGTTAATGGAGGACGATAAACACTTAGAGCTGTTGGACAGGT 448
BSNT_03614___ 449 TTGCCGGGGCCGAAGTGGAAAGCGCGCTCAAAACGTATCAGGAAGGATAC 498
||||.||.||.||.|..|||..||||||..|..|.||.||.|||||.||.
RBAM_022570__ 449 TTGCGGGCGCTGAGGCCGAATCCGCGCTTCAGGCTTACCATGAAGGCTAT 498
BSNT_03614___ 499 CAGCGGTATATGAAGCTGCTC-AAAAAGCTTAAGCAGCTTTCTGAAAGCG 547
.||||.||||||||||||||| ||||||| .|||.||||.||.|||||.|
RBAM_022570__ 499 GAGCGTTATATGAAGCTGCTCAAAAAAGC-GAAGAAGCTGTCAGAAAGTG 547
BSNT_03614___ 548 AACAGGAAATGGCCCATCGTCTTGATCTTATTCAATTTCAGCTCGAAGAA 597
|.|||||||||||.|||||..|.||.||.||||||||||||||.||||||
RBAM_022570__ 548 AGCAGGAAATGGCGCATCGGTTAGACCTGATTCAATTTCAGCTTGAAGAA 597
BSNT_03614___ 598 ATCGAATCGGCAAAGCTTGAGCTTAACGAAGATGAACAGCTCCAAGAAGA 647
|||||.|||||.||||||||..|.||.|||||.||.|..||.||.|||||
RBAM_022570__ 598 ATCGAGTCGGCGAAGCTTGAATTGAATGAAGACGAGCTTCTTCAGGAAGA 647
BSNT_03614___ 648 GCGCCAGCAAATTTCAAACTTTGAGAAGATATATGAGTCGCTGCAAAATG 697
|||..||||.||.||.||||||||.||.||.|||||.||..|||||||.|
RBAM_022570__ 648 GCGGAAGCAGATATCCAACTTTGAAAAAATTTATGAATCATTGCAAAACG 697
BSNT_03614___ 698 CATATAACGCGCTTCGCAGTGAGCAGGGCGGATTGGACTGGGTTGGAATG 747
|.|||||.|||||.|||||.||||||||.||..|.||||||||.||||||
RBAM_022570__ 698 CCTATAATGCGCTCCGCAGCGAGCAGGGGGGGCTTGACTGGGTCGGAATG 747
BSNT_03614___ 748 GCATCAGCGCAGCTTGAAGATATATCTGATATAAACGAACCGCTGAAAAA 797
||.||.||.||||||||||||||.||.|||||.||.|||||||||.||||
RBAM_022570__ 748 GCCTCTGCCCAGCTTGAAGATATTTCGGATATCAATGAACCGCTGCAAAA 797
BSNT_03614___ 798 AATGTCTGAAAGTGTTTCGAACTCCTACTATTTGCTTGAGGATGCCACAT 847
..||||.||||||||.||.|..|||||.|||.||||.||||||||.||.|
RBAM_022570__ 798 GCTGTCAGAAAGTGTGTCAAGTTCCTATTATCTGCTGGAGGATGCAACCT 847
BSNT_03614___ 848 TTCAGATGAGAAATATGCTGGATGAGCTTGAATTTGATCCGGAACGCCTG 897
||||||||.|.|||.||.|.|||||.||.||||.|||.||||||||.|||
RBAM_022570__ 848 TTCAGATGCGCAATCTGTTAGATGATCTGGAATATGACCCGGAACGGCTG 897
BSNT_03614___ 898 AACTATATTGAGACGCGACTTAATGAAATCAAACAGCTGAAACGAAAATA 947
||.|.||||||.||.||..|.|||||.||||||||||||||.||.|||||
RBAM_022570__ 898 AATTTTATTGAAACCCGTTTAAATGAGATCAAACAGCTGAAGCGCAAATA 947
BSNT_03614___ 948 CGGTGCCACTGTTGAAGACATTTTGGAATATGCTTCTAAAATTGAAGAAG 997
|||.||.||.||.|||||||||||||||||.|..||.|||||.|||||.|
RBAM_022570__ 948 CGGAGCGACGGTAGAAGACATTTTGGAATACGGCTCCAAAATAGAAGAGG 997
BSNT_03614___ 998 AGATTGACCAAATTGAAAACAGGGACAGCCACCTTCAAAGC-TTGAAAAA 1046
|.||.||.|||||.||.|||.|.|||||||||||| .|||| .||||.||
RBAM_022570__ 998 AAATCGATCAAATCGAGAACCGTGACAGCCACCTT-GAAGCGCTGAAGAA 1046
BSNT_03614___ 1047 GGAGCTTGACTCCGTCGGCAAAGATGTCGCAGTGGAAGCGGCAAATGTGT 1096
|||..|.||.||.||||||||||||||.||.||.|||||.||.|||.|.|
RBAM_022570__ 1047 GGAATTGGAGTCGGTCGGCAAAGATGTGGCCGTAGAAGCCGCCAATTTAT 1096
BSNT_03614___ 1097 CACAAATCCGAAAAACATGGGCGAAAAAGCTGGCTGATGAGATTCATCGG 1146
||.|||||.|||||.|.|||||.||.||.|||||.||.|.||||||||.|
RBAM_022570__ 1097 CAAAAATCAGAAAAGCTTGGGCTAAGAAACTGGCGGAAGCGATTCATCAG 1146
BSNT_03614___ 1147 GAATTAAAAAGCCTGTACATGGAAAAATCAACTTTTGATACGGAATTTAA 1196
|||||||||||.|||||.||||..|||||.||.|||||||||||||||..
RBAM_022570__ 1147 GAATTAAAAAGTCTGTATATGGGCAAATCCACGTTTGATACGGAATTTCT 1196
BSNT_03614___ 1197 GGTCAGAACAG---CGTCACGCAATGAAGAGGCTCCGCTTGTAAACGGCC 1243
.||.|.|||.| |||||..||.|||| ||.|||.||||.|||||.|
RBAM_022570__ 1197 CGTGAAAACCGATCCGTCAGCCAGTGAA---GCACCGGTTGTTAACGGGC 1243
BSNT_03614___ 1244 AGCCCGTTCAGCTGACTGAACAAGGGATTGACCTGGTGAAGTTTTTAATT 1293
|||||||.|||||.||..||.|.|||||||||||.|||||||||||||||
RBAM_022570__ 1244 AGCCCGTGCAGCTTACCCAAAAGGGGATTGACCTTGTGAAGTTTTTAATT 1293
BSNT_03614___ 1294 TCGACCAATACAGGCGAGCCGCTGAAATCCCTTTCGAAAGTCGCTTCAGG 1343
||.||.||.||.||.|||||..|.|||.|.||.||.||.||||||||.||
RBAM_022570__ 1294 TCAACAAACACCGGTGAGCCTTTAAAACCGCTGTCAAAGGTCGCTTCCGG 1343
BSNT_03614___ 1344 TGGAGAGCTGTCACGGGTGATGCTTGCCATAAAAAGCATTTTTTCTTCAC 1393
.||.|||||.|||.||||||||||.||.||.||.||.|||||||||||.|
RBAM_022570__ 1344 AGGCGAGCTTTCAAGGGTGATGCTGGCGATGAAGAGTATTTTTTCTTCCC 1393
BSNT_03614___ 1394 AACAGGATGTGACATCGATCATTTTTGATGAGGTTGATACCGGTGTAAGC 1443
|.||||||||.||.||.|||||.|||||.||.||.||.||||||||||||
RBAM_022570__ 1394 AGCAGGATGTCACCTCCATCATCTTTGACGAAGTGGACACCGGTGTAAGC 1443
BSNT_03614___ 1444 GGCAGGGTCGCACAGGCAATCGCAGAGAAGATCCATAAGGTGTCAATAGG 1493
||..||||.||.||.||.|||||.||.||.||||||||.||.||.|..||
RBAM_022570__ 1444 GGGCGGGTTGCCCAAGCCATCGCGGAAAAAATCCATAAAGTATCGACCGG 1493
BSNT_03614___ 1494 ATCACAAGTGCTGTGCATTACACACCTGCCTCAGGTGGCTGCCATGGCCG 1543
.|||||.|||||.|||||||||||||||||.|||||.||.||.|||||.|
RBAM_022570__ 1494 TTCACAGGTGCTCTGCATTACACACCTGCCGCAGGTTGCCGCTATGGCGG 1543
BSNT_03614___ 1544 ATACGCATCTTTATATTGCGAAGGAGCTAAAAGACGGCAGAACGACGACA 1593
|||||||.|||...||.||.||.||..|.||||||||..|.|||||.||.
RBAM_022570__ 1544 ATACGCACCTTCTGATCGCAAAAGAATTCAAAGACGGACGGACGACAACG 1593
BSNT_03614___ 1594 CGTGTCAAGCCGCTCTCTAAGCAGGAAAAGGTAGCGGAAATCGGGCGCAT 1643
|.|||||..|||||.||.||.|||||.|||||||||||||||||.|||||
RBAM_022570__ 1594 CATGTCACTCCGCTTTCCAAACAGGACAAGGTAGCGGAAATCGGCCGCAT 1643
BSNT_03614___ 1644 GATTGCAGGTGTCGAAGTAACCGACTTAACGAAACGCCATGCGAAAGAAC 1693
||||||.||.||.|||||.|||||..|.||.|||||.|||||..||||.|
RBAM_022570__ 1644 GATTGCGGGCGTTGAAGTGACCGATCTGACAAAACGGCATGCACAAGAGC 1693
BSNT_03614___ 1694 TTTTAAAACAAG-CGGATCAAGTCAAAACAACTGGGTAA 1731
||||||||||.| |||| ||.||.|||||.||.||.|||
RBAM_022570__ 1694 TTTTAAAACAGGCCGGA-CAGGTAAAAACGACAGGATAA 1731
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Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.