Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03613 and RBAM_022560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:53
# Commandline: needle
# -asequence dna-align/BSNT_03613___spoIVB.1.9828.seq
# -bsequence dna-align/RBAM_022560___spoIVB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03613___spoIVB-RBAM_022560___spoIVB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03613___spoIVB-RBAM_022560___spoIVB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03613___spoIVB
# 2: RBAM_022560___spoIVB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1296
# Identity: 1032/1296 (79.6%)
# Similarity: 1032/1296 (79.6%)
# Gaps: 30/1296 ( 2.3%)
# Score: 4076.0
#
#
#=======================================
BSNT_03613___ 1 ATGCCCGATAACATCAGAAAAGCAGTAGGTTTAATTCTCCTTGTTTCGTT 50
||||.|||||||||.||.||||||.|||||.||||||||||||||||.||
RBAM_022560__ 1 ATGCACGATAACATGAGGAAAGCAATAGGTGTAATTCTCCTTGTTTCTTT 50
BSNT_03613___ 51 ATTAAGTGTAGGTTTATGCAAACCGCTAAAAGAATATTTATTGATTCCAA 100
|.||||||||||.||.|..||.||..|.||||||||||||.||||.||..
RBAM_022560__ 51 ACTAAGTGTAGGCTTTTTTAAGCCATTTAAAGAATATTTACTGATACCGT 100
BSNT_03613___ 101 CGCAAATGAGAGTATTTGAAACCCAAACACAAGCGATTGAAACAAGTT-- 148
|..||||||..||.|||||||.|||.|||||.||..|| |..|||
RBAM_022560__ 101 CAGAAATGAACGTTTTTGAAAACCAGACACAGGCCGTT----CCGGTTAA 146
BSNT_03613___ 149 --TATCGGTAAACGCTCAGACACCA----GAATCCTCAGAAGCGTTTACA 192
.|||..|||.||||.|.| | ||||..||||||||.|||||.
RBAM_022560__ 147 TGCATCAATAAGCGCTGAAA----AGGGCGAATTATCAGAAGCCTTTACG 192
BSNT_03613___ 193 GT-AAAGAAAGATC-CG--CATGAAATCAAGGTGAC-GGGCAAA-AAATC 236
.| |||| ||||.| || ||||.||.|| |.|| ||||||| |||
RBAM_022560__ 193 CTGAAAG-AAGAGCACGGCCATGCAAACA---TAACAGGGCAAACAAA-- 236
BSNT_03613___ 237 AGGTGAGTCAGAATTGGTATATGATCTTGCCGGATTTCCAATTAAAAAAA 286
|||...|||||||.|.|||||||||||||||||||||||.||||||||||
RBAM_022560__ 237 AGGCCGGTCAGAAGTAGTATATGATCTTGCCGGATTTCCCATTAAAAAAA 286
BSNT_03613___ 287 CAAAAGTGCATGTTCTTCCTGATTTAAAGGTTATACCTGGCGGACAATCA 336
|.|||||||.|||.|||||.||.||.|||||.||.||.||||||||.||.
RBAM_022560__ 287 CGAAAGTGCGTGTCCTTCCAGAATTGAAGGTCATTCCGGGCGGACAGTCC 336
BSNT_03613___ 337 ATCGGTGTAAAACTTCATTCCGTCGGTGTTCTTGTCGTCGGATTTCATCA 386
||||||||||||||.|||||.|||||||||.|.||||||||.|||||.||
RBAM_022560__ 337 ATCGGTGTAAAACTGCATTCAGTCGGTGTTTTGGTCGTCGGTTTTCACCA 386
BSNT_03613___ 387 AATCAATACAAGTGAAGGCAAAAAATCTCCGGGAGAAACGGCCGGAATTG 436
..|.|..||||..||.||.|||||.||||||||||||...||.|||||||
RBAM_022560__ 387 GGTGATGACAAAGGATGGGAAAAAGTCTCCGGGAGAACAAGCGGGAATTG 436
BSNT_03613___ 437 AAGCGGGCGACATCATTATTGAGATGAATGGACAGAAAATTGAAAAAATG 486
||.|.|||||||||||||||.|.|||||.|||||.||||||||.||||||
RBAM_022560__ 437 AATCTGGCGACATCATTATTAAAATGAACGGACATAAAATTGATAAAATG 486
BSNT_03613___ 487 AATGATGTAGCCCCATTTATTCAAAAGGCTGGGAAAACTGGTGAATCTTT 536
|..||..|.|||||.|||||||||||.||.||.|||||.|||||||||||
RBAM_022560__ 487 AGCGACATCGCCCCGTTTATTCAAAAAGCGGGCAAAACCGGTGAATCTTT 536
BSNT_03613___ 537 AGATTTACTGATCAAACGTGATAAACAGAAAATCAAAACGAAGCTGATCC 586
.||||||.||.|.|||||.|||||.||.|||||||||||.||||||||.|
RBAM_022560__ 537 GGATTTATTGGTGAAACGCGATAAGCAAAAAATCAAAACAAAGCTGATTC 586
BSNT_03613___ 587 CAGA-AAAGGATGAAGGAGAAGGCAAATACAGAATCGGGTTATATATCAG 635
| || ||||||.||||..||.||.|||||..|||||||..|.||||||.|
RBAM_022560__ 587 C-GACAAAGGACGAAGCCGAGGGGAAATATCGAATCGGCCTTTATATCCG 635
BSNT_03613___ 636 AGATTCTGCTGCCGGCATCGGCACTATGACCTTTTATGAACCGAAAACAA 685
.|||||.||.||||||||||||||.|||||.||||.||||||||||||||
RBAM_022560__ 636 CGATTCGGCAGCCGGCATCGGCACCATGACTTTTTTTGAACCGAAAACAA 685
BSNT_03613___ 686 AAAAATACGGAGCACTTGGCCACGTGATTTCCGATATGGACACAAAGAAA 735
||||||||||.|||.|.||||||||.||.||.||||||||.|||||.|||
RBAM_022560__ 686 AAAAATACGGCGCATTGGGCCACGTCATCTCTGATATGGATACAAAAAAA 735
BSNT_03613___ 736 CCAATTGTAGTGGAGAATGGAGAAATCGTTAAATCCACTGTAACATCAAT 785
||.|||||.||.||..|.|||||||||||....||.|||||||||||.||
RBAM_022560__ 736 CCGATTGTTGTAGAAGACGGAGAAATCGTCCGTTCAACTGTAACATCGAT 785
BSNT_03613___ 786 TGAAAAAGGGACAGGCGGTAATCCGGGAGAAAAACTGGCGCGATTTTCCT 835
|||||||||.|.||||||.|||||.||.|||||||||||..|.|||||.|
RBAM_022560__ 786 TGAAAAAGGAAAAGGCGGCAATCCCGGCGAAAAACTGGCAAGGTTTTCGT 835
BSNT_03613___ 836 CAGAACGCAAAACGATCGGGGATATTAACAGAAACAGCCCGTTTGGGATT 885
|||||||.|||||||||||.|||||||||.|.|||||||||||.||.||.
RBAM_022560__ 836 CAGAACGGAAAACGATCGGCGATATTAACCGCAACAGCCCGTTCGGCATC 885
BSNT_03613___ 886 TTCGGCACACTGCATCAGCCGATTCAAAACAACATATCAGATCAAGCATT 935
|||||.||||||||||||||||||.||||||||||.||.||..||||..|
RBAM_022560__ 886 TTCGGGACACTGCATCAGCCGATTAAAAACAACATTTCCGACAAAGCGCT 935
BSNT_03613___ 936 GCCGGTTGCGTTTTCTACCGAAGTCAAAAAAGGGCCGGCTGAAATTTTAA 985
.|||.||||.||.||.|..|||||.||||||||.||.||..||||..|.|
RBAM_022560__ 936 TCCGATTGCTTTGTCAAATGAAGTAAAAAAAGGACCTGCGCAAATGCTGA 985
BSNT_03613___ 986 CCGTTATTGATGATGACAAAGTAGAAAAATTCGATATTGAAATCGTTAGC 1035
|.|||||.||..|.||.||||||||.|||||.||||||||||||||.|||
RBAM_022560__ 986 CGGTTATCGAAAACGATAAAGTAGAGAAATTTGATATTGAAATCGTCAGC 1035
BSNT_03613___ 1036 ACAACGCCGCAAAAATTCCCTGCGACAAAAGGAATGGTGTTGAAAATTAC 1085
||.|||||||||||||||||.||||||||.|||||||||||||||.|.||
RBAM_022560__ 1036 ACCACGCCGCAAAAATTCCCGGCGACAAAGGGAATGGTGTTGAAAGTGAC 1085
BSNT_03613___ 1086 CGATCCAAGGCTGTTGAAAGAAACAGGAGGCATCGTACAGGGGATGAGCG 1135
.|||||.|..|||.|||||..|||.||.||.|||||.|||||||||||||
RBAM_022560__ 1086 AGATCCGAAACTGCTGAAAAGAACCGGCGGAATCGTTCAGGGGATGAGCG 1135
BSNT_03613___ 1136 GAAGTCCGATTATTCAAAATGGAAAAGTGATCGGTGCTGTCACCCATGTA 1185
||||.|||||.||.||.||.|||||.||..||||.||.||.|||||.|||
RBAM_022560__ 1136 GAAGCCCGATCATCCAGAACGGAAAGGTCGTCGGAGCCGTAACCCACGTA 1185
BSNT_03613___ 1186 TTTGTAAATGACCCGACAAGCGGCTACGGTGTTCATATTGAATGGATGCT 1235
|||||.|||||.|||||||||||||||||.||||||||.|||||||||||
RBAM_022560__ 1186 TTTGTCAATGATCCGACAAGCGGCTACGGCGTTCATATCGAATGGATGCT 1235
BSNT_03613___ 1236 GTCAGAAGCAGGAATCGATATTTACGGAAAAGAAAAAGCAAGCTGA 1281
|||.|||||.||..|.|||.|||||||.|||||.||||||||||||
RBAM_022560__ 1236 GTCTGAAGCGGGTGTTGATGTTTACGGGAAAGACAAAGCAAGCTGA 1281
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