Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03598 and RBAM_022450

See Amino acid alignment / Visit BSNT_03598 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:52
# Commandline: needle
#    -asequence dna-align/BSNT_03598___mmgA.1.9828.seq
#    -bsequence dna-align/RBAM_022450___mmgA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03598___mmgA-RBAM_022450___mmgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03598___mmgA-RBAM_022450___mmgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03598___mmgA
# 2: RBAM_022450___mmgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1220
# Identity:     864/1220 (70.8%)
# Similarity:   864/1220 (70.8%)
# Gaps:          76/1220 ( 6.2%)
# Score: 2886.5
# 
#
#=======================================

BSNT_03598___      1 ATGAGGAAAACAGTCATTGTAAGTGCTGCAAGAACGCCATTTGGCAAATT     50
                     .||.|.|||||.||.||.||.|||||.|||||||||||.||.||.|||||
RBAM_022450__      1 GTGGGAAAAACGGTTATCGTCAGTGCGGCAAGAACGCCGTTCGGAAAATT     50

BSNT_03598___     51 CGGCGGAGTATTGAAAGAGGTGAAAGCTGCTGAGCTTGGGGGCATGGTGA    100
                     .|||||.|.|||.||||||||.||.||.||.||||||||.|||||.|..|
RBAM_022450__     51 TGGCGGCGCATTAAAAGAGGTAAAGGCAGCCGAGCTTGGCGGCATTGCCA    100

BSNT_03598___    101 TGAAGGAGGCGCTGCAA-CGGGCTGGAGTCTCTGGAGATGATGTAGAAGG    149
                     |.||.||.||..| ||| ||.||.|...||..||.|...||.|..|||||
RBAM_022450__    101 TAAAAGAAGCAAT-CAAGCGCGCCGCTATCAGTGAAAGCGAAGCGGAAGG    149

BSNT_03598___    150 AAACGTCATGGGCATGGTTGTCCAGGCCGGCTCAGGGCAGATACCTTCCC    199
                     |...||.|||||.|||||.||||||||.||..|.||||||||.||..|.|
RBAM_022450__    150 AGCGGTGATGGGAATGGTCGTCCAGGCGGGTGCCGGGCAGATTCCGGCAC    199

BSNT_03598___    200 GTCAAGCTGCCCG-TCTGGCGGGAATGCCTTGGAGTGTGCCGTCAGAAAC    248
                     |.||.|||||..| |.||.|||| .|.||.|||...||.|||.|.|||||
RBAM_022450__    200 GGCAGGCTGCAAGATATGCCGGG-CTTCCGTGGTCCGTTCCGGCTGAAAC    248

BSNT_03598___    249 ACTGAATAAAGTCTGTGCTTCCGGCCTTCGCGCTGTCACTTTATGTGATC    298
                     ..|.|||||.||||||||.||.||.||..|.||.||.||..|.|||||||
RBAM_022450__    249 CATTAATAAGGTCTGTGCATCAGGGCTCAGGGCCGTTACCATCTGTGATC    298

BSNT_03598___    299 AAATGATTCGGGCGCAGGATGCGGACATACTTGTTGCGGGGGGGATGGAA    348
                     |||||||.||||||.|.|||||||||.|.||..||||.||.||.||||||
RBAM_022450__    299 AAATGATCCGGGCGAAAGATGCGGACGTGCTGATTGCAGGCGGAATGGAA    348

BSNT_03598___    349 AGCATGAGCAATATTCCGTATGCCGTTCCCGCCGGGCGCTGGGGAGCACG    398
                     |||||||||||.||||||||.|||.||||.|||||.||||||||.|...|
RBAM_022450__    349 AGCATGAGCAACATTCCGTACGCCATTCCGGCCGGCCGCTGGGGTGTGAG    398

BSNT_03598___    399 GATGGGGGACGGCGAGCTTAGGGACTTAATGGTGTATGACGGATTAACGT    448
                     ||||||||||||.|.|.||..|||.||||||||..|||||||..|.||.|
RBAM_022450__    399 GATGGGGGACGGGGTGTTTCAGGATTTAATGGTTCATGACGGGCTGACCT    448

BSNT_03598___    449 GCGCATTTGACGAGGTGCACATGGCTGTTCACGGAAATACAGCTGCCAAG    498
                     |.||.||.|||.|||||||.||||||||.|||||||..||.||.|||||.
RBAM_022450__    449 GTGCGTTCGACCAGGTGCATATGGCTGTCCACGGAAGCACTGCGGCCAAA    498

BSNT_03598___    499 GAATATGCAATCTCACGAAGA-GAGCAGGACGAATGGGC---GTTGAGAA    544
                     .|.||.|..||.||.|| .|| ||.|||||..|.|..||   .|||   |
RBAM_022450__    499 AAGTACGGCATTTCCCG-GGATGAACAGGATCATTACGCTCTTTTG---A    544

BSNT_03598___    545 GTCATGCAA-GGGCAGCTAAGGCCGCCGATGAAGGGAAGTTTCAGGATGA    593
                     |||| |.|| |.||.|||.||||.|||||.|..||.||.||.|..||.||
RBAM_022450__    545 GTCA-GAAACGCGCGGCTGAGGCGGCCGAGGCGGGCAAATTGCGTGAAGA    593

BSNT_03598___    594 AATTGTTCCCGTCAACTGGATCGGTCGAAAAGGAAAACCA----AACGTT    639
                     ||||||.|||||||.|||||.||| |.||||||..||.||    |.||||
RBAM_022450__    594 AATTGTCCCCGTCACCTGGACCGG-CAAAAAGGGCAAACAGCATACCGTT    642

BSNT_03598___    640 GTTGATAAA---GATGAAGCGATTCGCCGTGACACAAGTCTGGATCAGCT    686
                     |      ||   |||||.|.|.|.||||.|||.||.||.||.||.|||||
RBAM_022450__    643 G------AAGCGGATGAGGGGCTGCGCCCTGATACGAGCCTTGAGCAGCT    686

BSNT_03598___    687 CGCGAAACTTGCT----CCGATTTATGCAAGTGACGGTTCTATCACAGCC    732
                     .||  |.|  |||    ||.||||.|.||...|||||..|..|.||||||
RBAM_022450__    687 TGC--AGC--GCTCAAGCCAATTTTTACAGCCGACGGAACGGTTACAGCC    732

BSNT_03598___    733 GGCAATGCTCCTGGAGTCAATGACGGAGCCGGCGCGTTCGTGCTGATGTC    782
                     ||.||.|||||.||.||.||||||||.||.||.||.||.|||||||||||
RBAM_022450__    733 GGAAACGCTCCCGGTGTAAATGACGGGGCAGGAGCATTTGTGCTGATGTC    782

BSNT_03598___    783 TGAGGAAAAAGCTGCTG----AGCTTGGCAAACGGCCTCTGGCTACAATT    828
                     .|||||||||||.|| |    |||.||.||   ||||.||.||..|.||.
RBAM_022450__    783 AGAGGAAAAAGCCGC-GAAGCAGCATGTCA---GGCCGCTCGCAGCGATA    828

BSNT_03598___    829 CTTGGTTTT---TCAACTACG--GGAATGCCAGCGCACGAGCTGGCGGCA    873
                     |||||.|||   |||     |  |||.||..||||..|||||||||  ||
RBAM_022450__    829 CTTGGCTTTGCGTCA-----GTCGGACTGGAAGCGTCCGAGCTGGC--CA    871

BSNT_03598___    874 --GCGCCGGGGTTTGCCATTAACAAGCTCCTGAAAAAGAACGGTTTAACT    921
                       ||||||||....|||||.|.|..||||.|||.|||.|.|||    |||
RBAM_022450__    872 GCGCGCCGGGAGAGGCCATCAGCCGGCTCTTGACAAAAACCGG----ACT    917

BSNT_03598___    922 GTCC----AAGATATTGACTTGTTTGAAGTAAATGAAGCTTTTGCTTCAG    967
                     ||||    |.||||||||.||||||||||||||||||||.|||||.||.|
RBAM_022450__    918 GTCCGTTGACGATATTGATTTGTTTGAAGTAAATGAAGCATTTGCGTCCG    967

BSNT_03598___    968 TTGTTTTGACATGTGAAAAAATCGTAGGTTTCGATCTTGAAAAAGTAAAT   1017
                     |.||..||....||||||||||.|..||.|||...|..||||||||.|||
RBAM_022450__    968 TCGTGCTGGTGAGTGAAAAAATAGCCGGGTTCAGCCGGGAAAAAGTGAAT   1017

BSNT_03598___   1018 GTAAATGGCGGTGCGATCGCGCTCGGACACCCGATCGGCGCGAGCGGTGC   1067
                     |||||.||.||.||.||||||.||||.||||||||||||||.|||||.||
RBAM_022450__   1018 GTAAACGGAGGGGCAATCGCGTTCGGCCACCCGATCGGCGCAAGCGGAGC   1067

BSNT_03598___   1068 GAGAATTCTCATGACGCTTGTT-----TATGAATTAAAGCGACGAGGAGG   1112
                     ||||||..||||||     |||     ||.|||||||||||.||.|||||
RBAM_022450__   1068 GAGAATCATCATGA-----GTTTAATATACGAATTAAAGCGTCGCGGAGG   1112

BSNT_03598___   1113 GGGTCTGGGCGTTGCCGCTATTTGCAGCGGGGCAGCACAGGGAGACGCCG   1162
                     ||||.|.|||||.||.|||||.||||||||.||.||.||.|||||.||||
RBAM_022450__   1113 GGGTTTAGGCGTAGCGGCTATATGCAGCGGAGCGGCTCAAGGAGATGCCG   1162

BSNT_03598___   1163 TCTTAGTGCAGGTTCATTAA   1182
                     ||.|..|..||||..|.|.|
RBAM_022450__   1163 TCCTGCTTGAGGTGTACTGA   1182


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