Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03598 and RBAM_022450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:52
# Commandline: needle
# -asequence dna-align/BSNT_03598___mmgA.1.9828.seq
# -bsequence dna-align/RBAM_022450___mmgA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03598___mmgA-RBAM_022450___mmgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03598___mmgA-RBAM_022450___mmgA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03598___mmgA
# 2: RBAM_022450___mmgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1220
# Identity: 864/1220 (70.8%)
# Similarity: 864/1220 (70.8%)
# Gaps: 76/1220 ( 6.2%)
# Score: 2886.5
#
#
#=======================================
BSNT_03598___ 1 ATGAGGAAAACAGTCATTGTAAGTGCTGCAAGAACGCCATTTGGCAAATT 50
.||.|.|||||.||.||.||.|||||.|||||||||||.||.||.|||||
RBAM_022450__ 1 GTGGGAAAAACGGTTATCGTCAGTGCGGCAAGAACGCCGTTCGGAAAATT 50
BSNT_03598___ 51 CGGCGGAGTATTGAAAGAGGTGAAAGCTGCTGAGCTTGGGGGCATGGTGA 100
.|||||.|.|||.||||||||.||.||.||.||||||||.|||||.|..|
RBAM_022450__ 51 TGGCGGCGCATTAAAAGAGGTAAAGGCAGCCGAGCTTGGCGGCATTGCCA 100
BSNT_03598___ 101 TGAAGGAGGCGCTGCAA-CGGGCTGGAGTCTCTGGAGATGATGTAGAAGG 149
|.||.||.||..| ||| ||.||.|...||..||.|...||.|..|||||
RBAM_022450__ 101 TAAAAGAAGCAAT-CAAGCGCGCCGCTATCAGTGAAAGCGAAGCGGAAGG 149
BSNT_03598___ 150 AAACGTCATGGGCATGGTTGTCCAGGCCGGCTCAGGGCAGATACCTTCCC 199
|...||.|||||.|||||.||||||||.||..|.||||||||.||..|.|
RBAM_022450__ 150 AGCGGTGATGGGAATGGTCGTCCAGGCGGGTGCCGGGCAGATTCCGGCAC 199
BSNT_03598___ 200 GTCAAGCTGCCCG-TCTGGCGGGAATGCCTTGGAGTGTGCCGTCAGAAAC 248
|.||.|||||..| |.||.|||| .|.||.|||...||.|||.|.|||||
RBAM_022450__ 200 GGCAGGCTGCAAGATATGCCGGG-CTTCCGTGGTCCGTTCCGGCTGAAAC 248
BSNT_03598___ 249 ACTGAATAAAGTCTGTGCTTCCGGCCTTCGCGCTGTCACTTTATGTGATC 298
..|.|||||.||||||||.||.||.||..|.||.||.||..|.|||||||
RBAM_022450__ 249 CATTAATAAGGTCTGTGCATCAGGGCTCAGGGCCGTTACCATCTGTGATC 298
BSNT_03598___ 299 AAATGATTCGGGCGCAGGATGCGGACATACTTGTTGCGGGGGGGATGGAA 348
|||||||.||||||.|.|||||||||.|.||..||||.||.||.||||||
RBAM_022450__ 299 AAATGATCCGGGCGAAAGATGCGGACGTGCTGATTGCAGGCGGAATGGAA 348
BSNT_03598___ 349 AGCATGAGCAATATTCCGTATGCCGTTCCCGCCGGGCGCTGGGGAGCACG 398
|||||||||||.||||||||.|||.||||.|||||.||||||||.|...|
RBAM_022450__ 349 AGCATGAGCAACATTCCGTACGCCATTCCGGCCGGCCGCTGGGGTGTGAG 398
BSNT_03598___ 399 GATGGGGGACGGCGAGCTTAGGGACTTAATGGTGTATGACGGATTAACGT 448
||||||||||||.|.|.||..|||.||||||||..|||||||..|.||.|
RBAM_022450__ 399 GATGGGGGACGGGGTGTTTCAGGATTTAATGGTTCATGACGGGCTGACCT 448
BSNT_03598___ 449 GCGCATTTGACGAGGTGCACATGGCTGTTCACGGAAATACAGCTGCCAAG 498
|.||.||.|||.|||||||.||||||||.|||||||..||.||.|||||.
RBAM_022450__ 449 GTGCGTTCGACCAGGTGCATATGGCTGTCCACGGAAGCACTGCGGCCAAA 498
BSNT_03598___ 499 GAATATGCAATCTCACGAAGA-GAGCAGGACGAATGGGC---GTTGAGAA 544
.|.||.|..||.||.|| .|| ||.|||||..|.|..|| .||| |
RBAM_022450__ 499 AAGTACGGCATTTCCCG-GGATGAACAGGATCATTACGCTCTTTTG---A 544
BSNT_03598___ 545 GTCATGCAA-GGGCAGCTAAGGCCGCCGATGAAGGGAAGTTTCAGGATGA 593
|||| |.|| |.||.|||.||||.|||||.|..||.||.||.|..||.||
RBAM_022450__ 545 GTCA-GAAACGCGCGGCTGAGGCGGCCGAGGCGGGCAAATTGCGTGAAGA 593
BSNT_03598___ 594 AATTGTTCCCGTCAACTGGATCGGTCGAAAAGGAAAACCA----AACGTT 639
||||||.|||||||.|||||.||| |.||||||..||.|| |.||||
RBAM_022450__ 594 AATTGTCCCCGTCACCTGGACCGG-CAAAAAGGGCAAACAGCATACCGTT 642
BSNT_03598___ 640 GTTGATAAA---GATGAAGCGATTCGCCGTGACACAAGTCTGGATCAGCT 686
| || |||||.|.|.|.||||.|||.||.||.||.||.|||||
RBAM_022450__ 643 G------AAGCGGATGAGGGGCTGCGCCCTGATACGAGCCTTGAGCAGCT 686
BSNT_03598___ 687 CGCGAAACTTGCT----CCGATTTATGCAAGTGACGGTTCTATCACAGCC 732
.|| |.| ||| ||.||||.|.||...|||||..|..|.||||||
RBAM_022450__ 687 TGC--AGC--GCTCAAGCCAATTTTTACAGCCGACGGAACGGTTACAGCC 732
BSNT_03598___ 733 GGCAATGCTCCTGGAGTCAATGACGGAGCCGGCGCGTTCGTGCTGATGTC 782
||.||.|||||.||.||.||||||||.||.||.||.||.|||||||||||
RBAM_022450__ 733 GGAAACGCTCCCGGTGTAAATGACGGGGCAGGAGCATTTGTGCTGATGTC 782
BSNT_03598___ 783 TGAGGAAAAAGCTGCTG----AGCTTGGCAAACGGCCTCTGGCTACAATT 828
.|||||||||||.|| | |||.||.|| ||||.||.||..|.||.
RBAM_022450__ 783 AGAGGAAAAAGCCGC-GAAGCAGCATGTCA---GGCCGCTCGCAGCGATA 828
BSNT_03598___ 829 CTTGGTTTT---TCAACTACG--GGAATGCCAGCGCACGAGCTGGCGGCA 873
|||||.||| ||| | |||.||..||||..||||||||| ||
RBAM_022450__ 829 CTTGGCTTTGCGTCA-----GTCGGACTGGAAGCGTCCGAGCTGGC--CA 871
BSNT_03598___ 874 --GCGCCGGGGTTTGCCATTAACAAGCTCCTGAAAAAGAACGGTTTAACT 921
||||||||....|||||.|.|..||||.|||.|||.|.||| |||
RBAM_022450__ 872 GCGCGCCGGGAGAGGCCATCAGCCGGCTCTTGACAAAAACCGG----ACT 917
BSNT_03598___ 922 GTCC----AAGATATTGACTTGTTTGAAGTAAATGAAGCTTTTGCTTCAG 967
|||| |.||||||||.||||||||||||||||||||.|||||.||.|
RBAM_022450__ 918 GTCCGTTGACGATATTGATTTGTTTGAAGTAAATGAAGCATTTGCGTCCG 967
BSNT_03598___ 968 TTGTTTTGACATGTGAAAAAATCGTAGGTTTCGATCTTGAAAAAGTAAAT 1017
|.||..||....||||||||||.|..||.|||...|..||||||||.|||
RBAM_022450__ 968 TCGTGCTGGTGAGTGAAAAAATAGCCGGGTTCAGCCGGGAAAAAGTGAAT 1017
BSNT_03598___ 1018 GTAAATGGCGGTGCGATCGCGCTCGGACACCCGATCGGCGCGAGCGGTGC 1067
|||||.||.||.||.||||||.||||.||||||||||||||.|||||.||
RBAM_022450__ 1018 GTAAACGGAGGGGCAATCGCGTTCGGCCACCCGATCGGCGCAAGCGGAGC 1067
BSNT_03598___ 1068 GAGAATTCTCATGACGCTTGTT-----TATGAATTAAAGCGACGAGGAGG 1112
||||||..|||||| ||| ||.|||||||||||.||.|||||
RBAM_022450__ 1068 GAGAATCATCATGA-----GTTTAATATACGAATTAAAGCGTCGCGGAGG 1112
BSNT_03598___ 1113 GGGTCTGGGCGTTGCCGCTATTTGCAGCGGGGCAGCACAGGGAGACGCCG 1162
||||.|.|||||.||.|||||.||||||||.||.||.||.|||||.||||
RBAM_022450__ 1113 GGGTTTAGGCGTAGCGGCTATATGCAGCGGAGCGGCTCAAGGAGATGCCG 1162
BSNT_03598___ 1163 TCTTAGTGCAGGTTCATTAA 1182
||.|..|..||||..|.|.|
RBAM_022450__ 1163 TCCTGCTTGAGGTGTACTGA 1182
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