Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03584 and RBAM_022360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:51
# Commandline: needle
# -asequence dna-align/BSNT_03584___bcd.1.9828.seq
# -bsequence dna-align/RBAM_022360___bcd.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03584___bcd-RBAM_022360___bcd.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03584___bcd-RBAM_022360___bcd.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03584___bcd
# 2: RBAM_022360___bcd
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1096
# Identity: 891/1096 (81.3%)
# Similarity: 891/1096 (81.3%)
# Gaps: 2/1096 ( 0.2%)
# Score: 3623.0
#
#
#=======================================
BSNT_03584___ 1 ATGGAACTTTTTAAATATATGGAGAAATACGATTACGAACAATTGGTATT 50
||||||.||||||||||||||||||..||.||||||||||||||||||||
RBAM_022360__ 1 ATGGAAATTTTTAAATATATGGAGACTTATGATTACGAACAATTGGTATT 50
BSNT_03584___ 51 CTGCCAGGATGAACAATCTGGCTTAAAAGCGATTATCGCGATTCATGATA 100
||||||.|||||||||||.||.|||||||||||.||||||||||||||||
RBAM_022360__ 51 CTGCCAAGATGAACAATCCGGATTAAAAGCGATCATCGCGATTCATGATA 100
BSNT_03584___ 101 CAACGCTTGGTCCGGCGCTTGGCGGAACGAGAATGTGGACATATGAAAAT 150
|.|||||.||.||.||.||.||||||||.|||||||||||||||||.|.|
RBAM_022360__ 101 CGACGCTCGGCCCCGCACTCGGCGGAACAAGAATGTGGACATATGACAGT 150
BSNT_03584___ 151 GAAGAAGCGGCTATTGAAGATGCGCTCAGATTGGCTAGAGGCATGACCTA 200
|||||||||||.|||||||||||.||.|||.|.||.|.|||||||||.||
RBAM_022360__ 151 GAAGAAGCGGCGATTGAAGATGCACTGAGACTTGCAAAAGGCATGACTTA 200
BSNT_03584___ 201 TAAGAACGCGGCGGCAGGCTTAAACCTTGGCGGCGGAAAAACAGTCATTA 250
|||.||.|||||.||.||.||||||.|.||||||||.|||||.||.||||
RBAM_022360__ 201 TAAAAATGCGGCTGCCGGTTTAAACTTAGGCGGCGGGAAAACCGTTATTA 250
BSNT_03584___ 251 TCGGCGATCCGCGCAAAGACAAAAATGAGGAAATGTTCCGCGCGTTTGGC 300
||||.||.|||||||||||.||||||||.|||||||||||||||||.|||
RBAM_022360__ 251 TCGGAGACCCGCGCAAAGATAAAAATGAAGAAATGTTCCGCGCGTTCGGC 300
BSNT_03584___ 301 CGCTATATTCAAGGGCTGAACGGCAGATACATCACGGCTGAAGATGTGGG 350
|||||.||.|||||..|.|||||.||.||.||.|||||.|||||.||.||
RBAM_022360__ 301 CGCTACATCCAAGGCTTAAACGGAAGGTATATTACGGCGGAAGACGTCGG 350
BSNT_03584___ 351 CACAACGGTCGAGGACATGGATATCATTCATGATGAAACAGACTACGTTA 400
|||.||.||.||.||.|||||.|||||||||||||||||||||||.||.|
RBAM_022360__ 351 CACGACCGTTGAAGATATGGACATCATTCATGATGAAACAGACTATGTAA 400
BSNT_03584___ 401 CAGGGATTTCTCCTGCTTTCGGCTCTTCTGGAAATCCTTCTCCAGTCACG 450
|.||.||||||||.||.|||||.||.||.||||||||.||.||.||.|||
RBAM_022360__ 401 CCGGAATTTCTCCGGCATTCGGTTCATCAGGAAATCCGTCCCCGGTTACG 450
BSNT_03584___ 451 GCGTACGGGGTGTATAGAGGAATGAAGGCAGCAGCTAAAGCTGCTTTCGG 500
|||||.||.||.||.|.|||.|||||.||.|||||.|||||.||.||.||
RBAM_022360__ 451 GCGTATGGCGTCTACAAAGGGATGAAAGCCGCAGCGAAAGCAGCGTTTGG 500
BSNT_03584___ 501 AACCGACTCTCTTGAAGGAAAAAACATTGCTGTACAGGGTGTTGGGAACG 550
.||.||.||.||.|||||.||||..|||||.||.||.||.||.||.||.|
RBAM_022360__ 501 CACTGATTCACTGGAAGGTAAAACAATTGCCGTGCAAGGCGTGGGAAATG 550
BSNT_03584___ 551 TAGCCTATAACCTTTGCCGCCACTTGCATGAAGAAGGAGCAAACTTAATC 600
|.||.||.||.||.|||||||||.|.||.||||||||.||....||||||
RBAM_022360__ 551 TGGCTTACAATCTATGCCGCCACCTTCACGAAGAAGGCGCTTCTTTAATC 600
BSNT_03584___ 601 GTTACAGATATCAACAAACAATCTGTACAGCGTGCAGTTGAAGATTTTGG 650
||.||.||||||||.|||.|||||||..|.|||||.|||||.||.||.||
RBAM_022360__ 601 GTAACGGATATCAATAAAGAATCTGTTAAACGTGCCGTTGAGGACTTCGG 650
BSNT_03584___ 651 CGCCCGTGCGGTAGATCCTGATGATATTTATTCACAAGACTGCGATATTT 700
||||||.||.||.|||||.|..||.|||||.|||||.|..||||||||||
RBAM_022360__ 651 CGCCCGCGCAGTTGATCCCGGCGACATTTACTCACAGGCGTGCGATATTT 700
BSNT_03584___ 701 ATGCGCCGTGTGCCCTTGGTG-CGACTATTAACGACGACACCATTAAACA 749
||||.||.|||||.||.||.| ||.| ||||||||.|||||.||||||||
RBAM_022360__ 701 ATGCCCCATGTGCTCTCGGCGCCGTC-ATTAACGATGACACGATTAAACA 749
BSNT_03584___ 750 GCTGAAGGCGAAAGTGATCGCAGGTGCGGCTAACAACCAATTAAAAGAGA 799
|||||||||||||||.||.||.||.|||||.||.|||||..|.|||||.|
RBAM_022360__ 750 GCTGAAGGCGAAAGTCATTGCGGGAGCGGCCAATAACCAGCTGAAAGAAA 799
BSNT_03584___ 800 CACGCCATGGTGATCAAATTCACGAAATGGGCATCGTTTATGCACCGGAT 849
||||.||.||.|||...|||||.||||||||.|||||.||.||.||||||
RBAM_022360__ 800 CACGTCACGGCGATACCATTCATGAAATGGGAATCGTGTACGCTCCGGAT 849
BSNT_03584___ 850 TACGTGATTAACGCGGGCGGTGTCATCAACGTGGCAGATGAGCTTTACGG 899
||.||.||.||.||.|||||.||||||||.|||||.||||||||||||||
RBAM_022360__ 850 TATGTCATCAATGCAGGCGGGGTCATCAATGTGGCCGATGAGCTTTACGG 899
BSNT_03584___ 900 CTATAATGCAGAACGTGCATTGAAAAAAGTTGAAGGCATTTACGGCAATA 949
|||.|||||.||.||.||.||||||||.||||||||||||||.|..||.|
RBAM_022360__ 900 CTACAATGCTGAGCGGGCTTTGAAAAAGGTTGAAGGCATTTATGCAAACA 949
BSNT_03584___ 950 TCGAGCGTGTACTTGAGATTTCTCAGCGTGACGGCATTCCTGCATATTTA 999
|.|||||.||.||.||.|||||...|||||||||||||||..||||.|||
RBAM_022360__ 950 TTGAGCGGGTGCTCGATATTTCCGCGCGTGACGGCATTCCGACATACTTA 999
BSNT_03584___ 1000 GCGGCTGACCGCTTAGCAGAGGAACGGATTGAACGCATGCGCCGCTCAAG 1049
|||||||||||..|.||.||||||||.|||||.|||||||||||.|||||
RBAM_022360__ 1000 GCGGCTGACCGTCTGGCTGAGGAACGAATTGAGCGCATGCGCCGTTCAAG 1049
BSNT_03584___ 1050 AAGCCAGTTTTTGCAAAACGGCCACAGTGTATTAAGCAGACGTTAA 1095
||||||||||.|||||||||||||.|||.|||||||||||||.||.
RBAM_022360__ 1050 AAGCCAGTTTCTGCAAAACGGCCAAAGTATATTAAGCAGACGATAG 1095
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