Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03583 and RBAM_022350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:51
# Commandline: needle
# -asequence dna-align/BSNT_03583___buk.1.9828.seq
# -bsequence dna-align/RBAM_022350___buk.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03583___buk-RBAM_022350___buk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03583___buk-RBAM_022350___buk.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03583___buk
# 2: RBAM_022350___buk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1126
# Identity: 827/1126 (73.4%)
# Similarity: 827/1126 (73.4%)
# Gaps: 50/1126 ( 4.4%)
# Score: 3035.0
#
#
#=======================================
BSNT_03583___ 1 ATG-----AAAGTGCTACATGACGAAAAACGCATTCTCACAATTAATCCA 45
||| |||| ||||||||||||||||...|.||||||
RBAM_022350__ 1 ATGTTCGAAAAG-----------GAAAAACGCATTCTCATTCTGAATCCA 39
BSNT_03583___ 46 GGCTCAACTTCAACGAAAATCGGTGTTTTTCATAACGAAAGAAGCATTTT 95
||||||||.|||||||||||||||||.|||||.||.|||.|..|.||.||
RBAM_022350__ 40 GGCTCAACATCAACGAAAATCGGTGTCTTTCACAATGAACGCTGTATCTT 89
BSNT_03583___ 96 TGAAAAAACATTGAGACACAACATAGAAGAGCTGCAGCGATTTGACCGAA 145
||||||.||..||.|.||...|..|||||||||..|...||||.||.|.|
RBAM_022350__ 90 TGAAAAGACGCTGCGGCATCCCGAAGAAGAGCTAAAAACATTTAACAGCA 139
BSNT_03583___ 146 TTATTGATCAGTATGAATTTCGTAAA--AACCATATTCTCGAAACGCTTC 193
|.||.||.||.||.||||||||.||| ||.| |||||.||..|..|.|
RBAM_022350__ 140 TCATCGACCAATACGAATTTCGAAAAATAAGC--ATTCTTGAGTCTTTGC 187
BSNT_03583___ 194 ATGAGCAGGGAATCAATATCTCAAAGTTTGATGCAGTCTGCGCAAGAGGC 243
|.||.|||||.|||||.||.||||||||.|||||.||.||.||.||.|||
RBAM_022350__ 188 ACGAACAGGGCATCAACATTTCAAAGTTCGATGCCGTTTGTGCCAGGGGC 237
BSNT_03583___ 244 GGCCTTCTCCGGCCGATTGAAGGCGGGACCTACGTAGTGAATGATGAAAT 293
|||||.|||.|.||||||||.|||||.||.||.|.|||||||||.|..||
RBAM_022350__ 238 GGCCTGCTCAGACCGATTGAGGGCGGCACATATGAAGTGAATGACGCCAT 287
BSNT_03583___ 294 GATTGAGGACTTGAAAAGCGGTTACGCCGGTCAGCATGCTTCTAATCTCG 343
|||....||.|||||||.|||.|||..|||.|||||||||||||||||.|
RBAM_022350__ 288 GATCACTGATTTGAAAAACGGCTACAACGGCCAGCATGCTTCTAATCTGG 337
BSNT_03583___ 344 GCGGCATTATCGCGCGGGAAATCGCTGACGGCCTGAATATCCCTTCGTAT 393
||||.|||||.||..|||||||.||||||||..|.||||||||..|||||
RBAM_022350__ 338 GCGGAATTATTGCCAGGGAAATAGCTGACGGATTAAATATCCCCGCGTAT 387
BSNT_03583___ 394 ATCGTCGACCCTGTTGTCGTAGACGAAATGTCAGTGCTTGCGAAAGTTTC 443
||||||||.||.||.||.||.||.||.|||.|...|||.||.|||||.||
RBAM_022350__ 388 ATCGTCGATCCGGTCGTGGTGGATGAGATGACTCCGCTCGCTAAAGTATC 437
BSNT_03583___ 444 GGGCATGCCTGAAATTGAACGGAAAAGCATTTTCCATGCGTTAAACCAAA 493
.||.|||||||||||..|.||||||||||||||||||||.||.|||||||
RBAM_022350__ 438 AGGAATGCCTGAAATCAAGCGGAAAAGCATTTTCCATGCTTTGAACCAAA 487
BSNT_03583___ 494 AAGCTGTCGCTCGTAAAGCGGCAGCCTCTCTTGGCAAACGATATGAGAAC 543
|||||||.||.|||.|.|||||.||.||.||.||||||||.|||||..|.
RBAM_022350__ 488 AAGCTGTTGCCCGTCAGGCGGCGGCGTCCCTCGGCAAACGGTATGAACAG 537
BSNT_03583___ 544 ATGAAAATGATTATTACCCATATGGGCGGAGGTATTACAATTGGCGTCCA 593
|||||.|||||..|.||.|||||||||||.||.|..|||.|.||.|||||
RBAM_022350__ 538 ATGAAGATGATCGTCACTCATATGGGCGGCGGCACCACAGTCGGTGTCCA 587
BSNT_03583___ 594 TGACCGCGGGCGAGTGGTAGATGTCAATAACGGCCTGCACGGCGAGGGAC 643
|||..||||.||.|||...|||||.||.|||||.||.|||||.||.||||
RBAM_022350__ 588 TGATTGCGGACGGGTGACGGATGTTAACAACGGGCTTCACGGAGAAGGAC 637
BSNT_03583___ 644 CATTCAGTCCTGAACGAGCAGGAACAGTGCCTGCGGGAGATCTTGTTGAT 693
|.|||||.||.||.||.||.|||||.||.||.|||||.|||.|.||.||.
RBAM_022350__ 638 CCTTCAGCCCGGAGCGCGCGGGAACTGTTCCGGCGGGTGATTTGGTAGAA 687
BSNT_03583___ 694 CTATGTTTTTCAGGGGAATATACAAAAGAAGAAATCATGAAAAAGCTTGT 743
.|.||||||||.||..|.|||.||||||..||.||.||||||||.|||||
RBAM_022350__ 688 ATGTGTTTTTCCGGCAAGTATTCAAAAGCCGATATGATGAAAAAACTTGT 737
BSNT_03583___ 744 TGGCACCGGCGGACTTTTAGGCTATCTCGGTACAAATGATGCAGTAAAAG 793
.|||||.||||||||.|..|||||.||.||.||||..||.||.||.||.|
RBAM_022350__ 738 CGGCACGGGCGGACTCTCCGGCTACCTGGGGACAACGGACGCGGTGAAGG 787
BSNT_03583___ 794 TGGAACAGATG-ATTCAAGGGGGCGATGAAAAAGCCCGCTTCATTTATGA 842
||||| |.|.| |||||.|..||.||||||||.||.||..||||||||||
RBAM_022350__ 788 TGGAA-AAACGCATTCAGGCCGGAGATGAAAACGCACGTCTCATTTATGA 836
BSNT_03583___ 843 TGCCATGGCATATCAGGTAGCAAAGGAAATCGGGGCAGCCAGCGCGGCGT 892
.||||||||.|||||.||||||||.|||||||||||.||.|||||.|..|
RBAM_022350__ 837 CGCCATGGCTTATCAAGTAGCAAAAGAAATCGGGGCGGCAAGCGCCGTTT 886
BSNT_03583___ 893 TAAAAGGCGAAGTTGAAGCGATTGTGCTGACGGGAGGCCTTGCGTACGGC 942
|||||||..||||.||....||.||.||||||||.||..|.||||||||.
RBAM_022350__ 887 TAAAAGGAAAAGTAGACATTATCGTCCTGACGGGCGGATTGGCGTACGGG 936
BSNT_03583___ 943 AAAAGCTTTGTTTCTGCTATCAGATCATACATAGATTGGATTTCAGACGT 992
|||||.||.||.||.||.||||||||.|||||||||||||||||.||.||
RBAM_022350__ 937 AAAAGTTTCGTATCCGCCATCAGATCGTACATAGATTGGATTTCGGATGT 986
BSNT_03583___ 993 TTTAGTCTATCCGGGTGAAAATGAACTGCAGTCTCTTGCCCAAGGGGCGC 1042
..|.||.||.|||||.||||||||||||||.|||||.||.|||||.||||
RBAM_022350__ 987 ACTGGTGTACCCGGGAGAAAATGAACTGCAATCTCTCGCGCAAGGTGCGC 1036
BSNT_03583___ 1043 TCAGAGTATTGCAG--GGCGAAGAGCAATCCAAACAATATC--------- 1081
|..|.||.|| || ||.||.|||||.||.||.|||||||
RBAM_022350__ 1037 TTCGGGTTTT--AGCCGGTGAGGAGCAGTCAAAGCAATATCAGATCGGCG 1084
BSNT_03583___ 1082 --GTATTGAATAG------------- 1092
|.|.||||.|.
RBAM_022350__ 1085 AAGGAGTGAAAACAAATGGCGACTGA 1110
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