Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03579 and RBAM_022320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:50
# Commandline: needle
# -asequence dna-align/BSNT_03579___bkdAB.1.9828.seq
# -bsequence dna-align/RBAM_022320___bkdAB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03579___bkdAB-RBAM_022320___bkdAB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03579___bkdAB-RBAM_022320___bkdAB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03579___bkdAB
# 2: RBAM_022320___bkdAB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 988
# Identity: 811/988 (82.1%)
# Similarity: 811/988 (82.1%)
# Gaps: 8/988 ( 0.8%)
# Score: 3337.0
#
#
#=======================================
BSNT_03579___ 1 ATGTCAGTAATGTCATATATTGATGCA--ATCAATTTGGCGATGAAAGAA 48
|||||.||||||||.|||||||| || ||.|||...||.|||||||||
RBAM_022320__ 1 ATGTCTGTAATGTCTTATATTGA--CAGTATTAATGCAGCAATGAAAGAA 48
BSNT_03579___ 49 GAAATGGAACGAGATTCTCGCGTTTTCGTCCTTGGGGAAGATGTAGGAAG 98
|||||||||.|||||.|.||||||||.||.||.||||||||.||.||.||
RBAM_022320__ 49 GAAATGGAAAGAGATCCGCGCGTTTTTGTTCTCGGGGAAGACGTCGGGAG 98
BSNT_03579___ 99 AAAAGGCGGTGTGTTTAAAGCGACAGCGGGACTCTATGAACAATTCGGGG 148
|||||||||.|||||||||||.||.|||||.|||||||||||.|||||.|
RBAM_022320__ 99 AAAAGGCGGCGTGTTTAAAGCCACGGCGGGTCTCTATGAACAGTTCGGAG 148
BSNT_03579___ 149 AAGAGCGCGTTATGGATACGCCGCTTGCTGAATCTGCGATCGCAGGAGTC 198
|||||||.||.|||||||||||||||||||||||.|||||.||.||.||.
RBAM_022320__ 149 AAGAGCGGGTGATGGATACGCCGCTTGCTGAATCAGCGATTGCCGGTGTA 198
BSNT_03579___ 199 GGTATCGGAGCGGCAATGTACGGAATGAGACCGATTGCTGAAATGCAGTT 248
||.|||||.||.||.||||||||.|||.|.||||||||.||.||||||||
RBAM_022320__ 199 GGGATCGGCGCCGCGATGTACGGCATGCGCCCGATTGCCGAGATGCAGTT 248
BSNT_03579___ 249 TGCTGATTTCATTATGCCGGCAGTCAACCAAATTATTTCTGAAGCGGCTA 298
|||.|||||||||.||||.||.|||||||||||.|||||.||||||||.|
RBAM_022320__ 249 TGCCGATTTCATTCTGCCTGCGGTCAACCAAATCATTTCAGAAGCGGCAA 298
BSNT_03579___ 299 AAATCCGCTACCG--CAGCAACAATGACTGGAGCTGTCCGATTGTCGTCA 346
||||.|||||||| || ||||||||.||||||||||||||.|||.|||
RBAM_022320__ 299 AAATACGCTACCGTTCA--AACAATGATTGGAGCTGTCCGATGGTCATCA 346
BSNT_03579___ 347 GAGCGCCATACGGCGGAGGCGTGCACGGAGCCCTGTATCATTCTCAATCA 396
|||||||.||||||||.|||||||||||.||..||||||||||.|||||.
RBAM_022320__ 347 GAGCGCCTTACGGCGGCGGCGTGCACGGCGCGTTGTATCATTCCCAATCT 396
BSNT_03579___ 397 GTCGAAGCAATTTTCGCCAACCAGCCCGGACTGAAAATTGTCATGCCATC 446
||.||.||.|||||.|||||||||||.||.||.||||||||||||||.||
RBAM_022320__ 397 GTGGAGGCCATTTTTGCCAACCAGCCGGGCCTTAAAATTGTCATGCCTTC 446
BSNT_03579___ 447 AACACCATATGACGCCAAGGGTCTATTAAAAGCTGCAGTTCGTGACGAAG 496
|||.||.||||||||.||.||.||.||.|||||||||||.||||||||||
RBAM_022320__ 447 AACTCCTTATGACGCAAAAGGGCTGTTGAAAGCTGCAGTCCGTGACGAAG 496
BSNT_03579___ 497 ACCCAGTGCTGTTTTTTGAGCACAAGCGGGCGTACCGTCTGATAAAGGGA 546
|.||.|||||||||||.||.||.|||.|.||||||||||||||.||.||.
RBAM_022320__ 497 ATCCGGTGCTGTTTTTCGAACATAAGAGAGCGTACCGTCTGATTAAAGGC 546
BSNT_03579___ 547 GAGGTTCCGGCTGATGATTATGTCCTGCCAATCGGCAAGGCGGACGTAAA 596
||.||.||.||.||||||||.|||||.||.|||||.||||||||.|||||
RBAM_022320__ 547 GAAGTCCCTGCGGATGATTACGTCCTTCCGATCGGAAAGGCGGATGTAAA 596
BSNT_03579___ 597 ACGGGAAGGCGACGACATCACAGTGATCACATACGGTCTGTGTGTCCACT 646
|||.||||||..||||||.||.||.||.||.|||||..|.||.|||||.|
RBAM_022320__ 597 ACGCGAAGGCAGCGACATTACTGTTATTACGTACGGATTATGCGTCCATT 646
BSNT_03579___ 647 TCGCCTTACAAGCTGCAGAACGTCTCGAAAAAGATGGCATTTCAGCGCAT 696
|.||..|.||.|||||.||.||.||.||||||||.||.|||||.||.||.
RBAM_022320__ 647 TTGCTCTGCAGGCTGCCGAGCGCCTTGAAAAAGACGGAATTTCCGCACAC 696
BSNT_03579___ 697 GTGGTGGATTTAAGAACAGTTTACCCGCCTGATAAAGAAGCCATCATCGA 746
||..|.|||||..|.||.|||||.|||...|||||||||||||||||.||
RBAM_022320__ 697 GTATTAGATTTGCGTACGGTTTATCCGTTAGATAAAGAAGCCATCATTGA 746
BSNT_03579___ 747 AGCTGCGTCCAAAACTGGAAAGGTTCTTTTGGTCACAGAAGATACAAAAG 796
|||.|||||.|||||.|||||.||..|..||.|||||||||||||.||||
RBAM_022320__ 747 AGCCGCGTCTAAAACAGGAAAAGTATTGCTGATCACAGAAGATACGAAAG 796
BSNT_03579___ 797 AAGGCAGCATCATGAGCGAAGTAGCCGCAATTATATCCGAGCATTGTCTG 846
|||||.|.||.||||||||.||.|||||.|||||.||.||..|.||..|.
RBAM_022320__ 797 AAGGCGGTATTATGAGCGAGGTCGCCGCTATTATTTCTGAAAACTGCTTA 846
BSNT_03579___ 847 TTCGACTTAGACGCGCCAATCAAACGGCTTGCAGGTCCTGATATTCCGGC 896
||.||.|||||||||||.|||||.|||||||||||||||||..|||||||
RBAM_022320__ 847 TTTGATTTAGACGCGCCGATCAAGCGGCTTGCAGGTCCTGACGTTCCGGC 896
BSNT_03579___ 897 TATGCCTTATGCGCCGACAATGGAAAAATACTTTATGGTCAACCCTGATA 946
.||||||||||||||||||||||||||||||||.|||.|.||.|||||.|
RBAM_022320__ 897 AATGCCTTATGCGCCGACAATGGAAAAATACTTCATGATGAATCCTGACA 946
BSNT_03579___ 947 AAGTGGAAGCGGCGATGAGAGAATTAGCGGAGTTTTAA 984
|||..|||||.|||||||||||||||||||||||||||
RBAM_022320__ 947 AAGCAGAAGCCGCGATGAGAGAATTAGCGGAGTTTTAA 984
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