Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03572 and RBAM_022290

See Amino acid alignment / Visit BSNT_03572 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:50
# Commandline: needle
#    -asequence dna-align/BSNT_03572___yqiW.1.9828.seq
#    -bsequence dna-align/RBAM_022290___yqiW.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03572___yqiW-RBAM_022290___yqiW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03572___yqiW-RBAM_022290___yqiW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03572___yqiW
# 2: RBAM_022290___yqiW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 438
# Identity:     363/438 (82.9%)
# Similarity:   363/438 (82.9%)
# Gaps:           6/438 ( 1.4%)
# Score: 1539.0
# 
#
#=======================================

BSNT_03572___      1 TTGAATATGGACTTTAATTTATTTATGAATGATATTGTCCGCCAAGCGAG     50
                           |||||.|||||||||||||||||||||.|.||.||.|||||..|
RBAM_022290__      1 ------ATGGATTTTAATTTATTTATGAATGATGTCGTGCGTCAAGCCCG     44

BSNT_03572___     51 ACAGGAAATTACAGCTGCTGGATACACTGAGCTGAAAACAGCTGAAGAGG    100
                     .||||||||.||.||.||.||.||.||.|||||||||||.|||||.||.|
RBAM_022290__     45 CCAGGAAATCACGGCCGCCGGGTATACAGAGCTGAAAACCGCTGAGGAAG     94

BSNT_03572___    101 TGGATGAGGCACTTACGAAAAAAGGAACGACGCTTGTCATGGTAAACTCT    150
                     ||||.||.||.|||.||||||||||||||||.||.||||||||.||||||
RBAM_022290__     95 TGGACGAAGCGCTTTCGAAAAAAGGAACGACACTCGTCATGGTCAACTCT    144

BSNT_03572___    151 GTTTGCGGATGCGCCGGAGGAATTGCAAGACCGGCAGCCTACCATTCCGT    200
                     ||.|||||||||||.||.||.||||||.|.||.||.||.|||||||||||
RBAM_022290__    145 GTGTGCGGATGCGCAGGCGGTATTGCACGGCCTGCCGCGTACCATTCCGT    194

BSNT_03572___    201 TCACTATGATAAAAGACCTGATCAGCTCGTCACCGTTTTTGCCGGACAGG    250
                     .||.||.||||||.|.||.||||||||.||.||.||.|||||||||||||
RBAM_022290__    195 ACATTACGATAAACGCCCGGATCAGCTTGTGACGGTATTTGCCGGACAGG    244

BSNT_03572___    251 ATAAAGAAGCGACAGCGCGTGCGCGAGACTATTTTGAAGGTTATCCGCCA    300
                     ||||||||||||||||....||..||||.||.||||||||.||||||||.
RBAM_022290__    245 ATAAAGAAGCGACAGCCAAAGCAAGAGAATACTTTGAAGGCTATCCGCCG    294

BSNT_03572___    301 TCTTCTCCGTCCTTTGCGATTTTGAAAGACGGAAAGATCATGAAAATGGT    350
                     ||.||||||||.|||||.|||||.||||||||.||.||||||||||||||
RBAM_022290__    295 TCCTCTCCGTCATTTGCCATTTTAAAAGACGGGAAAATCATGAAAATGGT    344

BSNT_03572___    351 AGAGCGTCATGAAATTGAAGGCCACGAGCCGATGGCCGTAGTGGCAAAGC    400
                     .||.||.|||||||||||||||||.||||||||||||||.||..||||.|
RBAM_022290__    345 GGAACGCCATGAAATTGAAGGCCATGAGCCGATGGCCGTCGTCACAAAAC    394

BSNT_03572___    401 TGCAGGAAGCCTTTGAAGAATATTGTGAAGAAGTATAA    438
                     ||||||||||.|||||||||||||||||||||||||||
RBAM_022290__    395 TGCAGGAAGCATTTGAAGAATATTGTGAAGAAGTATAA    432


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