Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03567 and RBAM_022270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:49
# Commandline: needle
# -asequence dna-align/BSNT_03567___yqiY.1.9828.seq
# -bsequence dna-align/RBAM_022270___yqiY.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03567___yqiY-RBAM_022270___yqiY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03567___yqiY-RBAM_022270___yqiY.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03567___yqiY
# 2: RBAM_022270___yqiY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 661
# Identity: 524/661 (79.3%)
# Similarity: 524/661 (79.3%)
# Gaps: 2/661 ( 0.3%)
# Score: 2060.0
#
#
#=======================================
BSNT_03567___ 1 ATGAATTTGGATTTTTCAGCAACGATCCCCCAAATTCCTTTTATATTAGA 50
||||||||||||||.||||||||.|||||||||||||||||||||||.||
RBAM_022270__ 1 ATGAATTTGGATTTCTCAGCAACAATCCCCCAAATTCCTTTTATATTGGA 50
BSNT_03567___ 51 AGGCTTGGCAATTACATTAAAAATTGTTGTTGTATCTGCTATTATCGGAC 100
||||.|.||..|.|||||.||||||||..|.||.||.||..|.|||||.|
RBAM_022270__ 51 AGGCCTTGCGGTCACATTGAAAATTGTGCTCGTTTCGGCGGTCATCGGTC 100
BSNT_03567___ 101 TTATACTCGGTATTGTGCTAAGCTTATGCAAGATCAGCACATTCCGCCCG 150
||.||.|.||.||.|||||.|||||||..||.||||||||..||.|.|||
RBAM_022270__ 101 TTGTATTAGGCATCGTGCTCAGCTTATTTAAAATCAGCACGATCAGTCCG 150
BSNT_03567___ 151 TTTATCTGGATCGCTGATTTTTATACATCAGTGTTCCGAGGCACGCCTTT 200
.|.|..|||||.||.|||||||||||.||..|.|||||.||||||||..|
RBAM_022270__ 151 CTGAAATGGATTGCGGATTTTTATACTTCGATATTCCGCGGCACGCCGCT 200
BSNT_03567___ 201 AGTGCTGCAGCTTATGATTGTCTATTTTGGCCTTCCTCAGCTGCTCGGAT 250
.|||||||||||.|||||..|||||||.||..|.||.|||||.|||||.|
RBAM_022270__ 201 CGTGCTGCAGCTGATGATCATCTATTTCGGTATGCCGCAGCTCCTCGGCT 250
BSNT_03567___ 251 TTCAAATTGACCAGTTTTGGGCTGCGGTTGTCGCATTGTCTTTGAATTCC 300
||||.||.||.||.||||||||.|||||...||||||.||..|.|||||.
RBAM_022270__ 251 TTCAGATCGATCAATTTTGGGCGGCGGTCACCGCATTATCGCTCAATTCA 300
BSNT_03567___ 301 GCCGCTTATGTATCGGAAATTATCAGAGCCGGAATCAATGCCATTGATAA 350
||||||||.||.||.||||||||||||||.||||||||.||.|||||.||
RBAM_022270__ 301 GCCGCTTACGTCTCTGAAATTATCAGAGCGGGAATCAACGCAATTGACAA 350
BSNT_03567___ 351 AGGGCAAAAAGAAGCTGCTGTTGCACTCGGTGTCCCGTATGGAAAAATGA 400
|||.||||||||.|||||.||.||.|||||.||.|||||.||||||||||
RBAM_022270__ 351 AGGACAAAAAGAGGCTGCCGTCGCTCTCGGCGTGCCGTACGGAAAAATGA 400
BSNT_03567___ 401 TGAAGGATCTGCTGCTGCCGCAGGCCTTCAAAAATATATCACCTGCAATT 450
||||.||||||||||||||||||||.||.|||||.||.||.||.||.|||
RBAM_022270__ 401 TGAAAGATCTGCTGCTGCCGCAGGCGTTTAAAAACATTTCTCCGGCTATT 450
BSNT_03567___ 451 GTGAATGAATTAATTACGTTAACAAAAGAATCGGCGATCGTTACCGTCAT 500
.|.||.||||||||.||.|||||.|||||||||||||||||.||.||.||
RBAM_022270__ 451 ATTAACGAATTAATCACCTTAACGAAAGAATCGGCGATCGTCACAGTTAT 500
BSNT_03567___ 501 CGGGCTTGGTGATGTCATGAGACGCGCATATCAAGCTGGCGCCGCCACTT 550
|||.|||||.||..|.||||||||.||.||.||..|.||||||||.||.|
RBAM_022270__ 501 CGGTCTTGGCGACATTATGAGACGGGCCTACCAGTCCGGCGCCGCAACAT 550
BSNT_03567___ 551 ACAATTACCTTGAGCCGCTCATTATCGCGGGATTGATTTATTATGTGCTT 600
||||.||..|.||.||.||.|||.|.|||||.||.||.|||||.|||||.
RBAM_022270__ 551 ACAACTATTTAGAACCTCTTATTGTGGCGGGCTTAATCTATTACGTGCTC 600
BSNT_03567___ 601 GTCCTGATTTTAACGTTTATCGG-CAAGGCTGTAGAAAGGAAGCTGAAAT 649
||..||||.|||.|.||.||||| .||||| ||||||||||||||||||.
RBAM_022270__ 601 GTTTTGATCTTAGCATTCATCGGAAAAGGC-GTAGAAAGGAAGCTGAAAG 649
BSNT_03567___ 650 CCAATGATTAA 660
|||||||||||
RBAM_022270__ 650 CCAATGATTAA 660
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