Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03557 and RBAM_022210
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:49
# Commandline: needle
# -asequence dna-align/BSNT_03557___yqjE.1.9828.seq
# -bsequence dna-align/RBAM_022210___yqjE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03557___yqjE-RBAM_022210___yqjE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03557___yqjE-RBAM_022210___yqjE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03557___yqjE
# 2: RBAM_022210___yqjE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1117
# Identity: 894/1117 (80.0%)
# Similarity: 894/1117 (80.0%)
# Gaps: 2/1117 ( 0.2%)
# Score: 3566.0
#
#
#=======================================
BSNT_03557___ 1 ATGGTGAATGAAAAACGCCTGCTGGAAGAATTTTTAGAGCTTGTCCAAAT 50
|||||.||.||||||||.|||||.|||||||||.|.||.||.||.|||||
RBAM_022210__ 1 ATGGTAAACGAAAAACGTCTGCTTGAAGAATTTCTTGAACTCGTTCAAAT 50
BSNT_03557___ 51 TGACTCAGAAACAAAGCACGAAGCTGAAATCTGCAAAGTGCTGAAACGAA 100
|||.|||||.|||||.||.|||||.||||||.||||.|||||.||||.||
RBAM_022210__ 51 TGATTCAGAGACAAAACATGAAGCGGAAATCAGCAAGGTGCTCAAACAAA 100
BSNT_03557___ 101 AATTTTCTGATTTAGGTGTGGACGTTAAAGAAGACAATACAATGGATATC 150
||||..||||||||||..||..|||.||||||||..||||||..||..|.
RBAM_022210__ 101 AATTCACTGATTTAGGATTGAGCGTAAAAGAAGATGATACAAAAGAAGTG 150
BSNT_03557___ 151 ACGGGCCACGGAGCCGGTAACCTGATTTGCACGCTAAAAGGGACAAAACA 200
|||||.||.||||||||.|||.|.||.||.|||.||||.||.||||||.|
RBAM_022210__ 151 ACGGGGCATGGAGCCGGCAACTTAATCTGTACGTTAAAGGGCACAAAAGA 200
BSNT_03557___ 201 AACAGATACGATCTATTTTACATCTCATATGGACACAGTTGTACCCGGAA 250
..|.||||||||.|||||.|||||.||.||||||||.|||||.||.||.|
RBAM_022210__ 201 TGCGGATACGATTTATTTCACATCGCACATGGACACGGTTGTCCCGGGCA 250
BSNT_03557___ 251 ACGGCGTAAAACCAGTTGTAGAGAACGGTTACGTCAAAACTGACGGCACG 300
|.|||||.||.||..||||.||..||||.||.||.|||.|.|||||||||
RBAM_022210__ 251 AAGGCGTTAAGCCGATTGTGGAAGACGGCTATGTAAAATCCGACGGCACG 300
BSNT_03557___ 301 ACGATTTTAGGCGCTGATGATAAAGCGGGATTGGCTGCAATGTTTGAGGC 350
||||||.|.||||||||||||||..|||||.|.||.|||||||||||.||
RBAM_022210__ 301 ACGATTCTCGGCGCTGATGATAAGACGGGACTTGCCGCAATGTTTGAAGC 350
BSNT_03557___ 351 GATTAAGGTGCTGAAAGAAGAAAACATTGAACACGGCACGATTGAATTCA 400
.|||||.||||||||||||.|||||||.||.||||||||.||||||||||
RBAM_022210__ 351 CATTAAAGTGCTGAAAGAACAAAACATCGAGCACGGCACCATTGAATTCA 400
BSNT_03557___ 401 TCATCACAGTAGGGGAAGAATCGGGTCTGATCGGAGCGAAGGCTCTTGAC 450
|.|||||.|..||.|||||||||||..|..||||.||.||.||..|.||.
RBAM_022210__ 401 TTATCACGGCCGGAGAAGAATCGGGATTAGTCGGGGCAAAAGCAATGGAT 450
BSNT_03557___ 451 CGTTCTATGATCACTGCATCCTACGGCTATGCTCTTGATTCAGACGGAAA 500
|||||....||.||.||....|||||.|.|||.|||||||||||||||||
RBAM_022210__ 451 CGTTCAGACATTACCGCGAAATACGGTTTTGCGCTTGATTCAGACGGAAA 500
BSNT_03557___ 501 AGTCGGAAATATTATTGTGGCCGCGCCGACACAGGCGAAGGTAAGAGCGG 550
||||||.||.||||||||.|||||.||||||||.|||||.||.|||||..
RBAM_022210__ 501 AGTCGGCAACATTATTGTAGCCGCACCGACACAAGCGAAAGTGAGAGCAA 550
BSNT_03557___ 551 CAATTTTCGGGAAAACCGCGCACGCCGGGGTTGAACCTGAAAAAGGGATT 600
|.||||||||||||||.||.||.||.|||||.|||||.||||||||.||.
RBAM_022210__ 551 CCATTTTCGGGAAAACGGCTCATGCGGGGGTAGAACCGGAAAAAGGCATC 600
BSNT_03557___ 601 TCAGCGATTACAATCGCTAGC-AAAGCCATCTCAAAAATGCCATTGGGCC 649
||.|||||||||||||| |.| |||||.|||||.||||||||..|.||||
RBAM_022210__ 601 TCCGCGATTACAATCGC-ATCAAAAGCAATCTCTAAAATGCCGCTCGGCC 649
BSNT_03557___ 650 GTATCGATGAAGAAACAACAGCTAATATCGGCCGGTTTGAAGGCGGCACA 699
||||.|||.||||||||||.|||||||||||.||.||.|||||||||||.
RBAM_022210__ 650 GTATTGATAAAGAAACAACGGCTAATATCGGACGTTTCGAAGGCGGCACG 699
BSNT_03557___ 700 CAAACAAACATTGTGTGCGATGAAGTTCATATTCTTGCTGAAGCGCGCTC 749
|||||.||.||.||.|||||..|.|||.|||||||.|||||||||||.||
RBAM_022210__ 700 CAAACCAATATCGTCTGCGACCAGGTTGATATTCTGGCTGAAGCGCGTTC 749
BSNT_03557___ 750 TTTAGTTCCTGAGAAAATGGAAGCTCAGGTTCAAAAAATGAAAGCTGCTT 799
.|||||.|||||.|||||||||||.||.||.||.||||||||||..||||
RBAM_022210__ 750 ATTAGTGCCTGAAAAAATGGAAGCGCAAGTGCAGAAAATGAAAGAAGCTT 799
BSNT_03557___ 800 TTGAAGAGGCAGCTGCTGATATGGGCGGACGCGCAGAAGTCGAAATTGAG 849
|.|||...||.||.|||||.|||||.||.|||||.|||||.||.||.|.|
RBAM_022210__ 800 TCGAATCTGCTGCAGCTGAGATGGGAGGCCGCGCGGAAGTGGACATCGCG 849
BSNT_03557___ 850 GTTATGTATCCGGGCTTTAAATATCAAGACGGCGACCAAGTTGTTGAAAT 899
||.|||||||||||.||.||||||||.||||||||.||.|||||.|||.|
RBAM_022210__ 850 GTCATGTATCCGGGTTTCAAATATCAGGACGGCGATCAGGTTGTGGAAGT 899
BSNT_03557___ 900 CGCGAAAAAAGCGGCTGCTAAAATCGGACGTCCAAGCGAGCTGCAAACGA 949
|||||||||||||||.||.||||||||.||.||.|||||.||.||.||.|
RBAM_022210__ 900 CGCGAAAAAAGCGGCGGCAAAAATCGGCCGGCCGAGCGAACTTCAGACAA 949
BSNT_03557___ 950 GCGGCGGCGGAAGCGATGCGAACGTAATCGCTGGTCATGGCATCCCGACG 999
|||||||||||||.||.||.|||||.||.||.||.||.|||||.|||||.
RBAM_022210__ 950 GCGGCGGCGGAAGTGACGCAAACGTCATTGCCGGCCACGGCATTCCGACA 999
BSNT_03557___ 1000 GTCAATCTTGCTGTCGGTTATGAGCAAATCCATACAAAAAATGAAAAAAT 1049
|||||.||..|.||.||.|||||.|||||||||||.||||||||||||||
RBAM_022210__ 1000 GTCAACCTGTCAGTAGGCTATGAACAAATCCATACGAAAAATGAAAAAAT 1049
BSNT_03557___ 1050 GCCGATCGAAGAGCTCGTTAAAACGGCAGAAATGGTTGTTGCCATTATTG 1099
||||||.|||||||||||.||||||||.||||||||.|||||||||||.|
RBAM_022210__ 1050 GCCGATTGAAGAGCTCGTCAAAACGGCGGAAATGGTCGTTGCCATTATCG 1099
BSNT_03557___ 1100 AAGAGGCGGCAAAATAA 1116
||...||.||.||.|||
RBAM_022210__ 1100 AAACAGCAGCCAACTAA 1116
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