Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03550 and RBAM_022170
See
Amino acid alignment /
Visit
BSNT_03550 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:48
# Commandline: needle
# -asequence dna-align/BSNT_03550___yqjI.1.9828.seq
# -bsequence dna-align/RBAM_022170___yqjI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03550___yqjI-RBAM_022170___yqjI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03550___yqjI-RBAM_022170___yqjI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03550___yqjI
# 2: RBAM_022170___yqjI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1411
# Identity: 1225/1411 (86.8%)
# Similarity: 1225/1411 (86.8%)
# Gaps: 2/1411 ( 0.1%)
# Score: 5369.0
#
#
#=======================================
BSNT_03550___ 1 ATGTCAAAACAACAAATCGGCGTTATCGGACTTGCGGTCATGGGTAAAAA 50
||||||||||||||||||||.||||||||.||||||||.|||||||||||
RBAM_022170__ 1 ATGTCAAAACAACAAATCGGAGTTATCGGTCTTGCGGTAATGGGTAAAAA 50
BSNT_03550___ 51 TCTGGCTTTAAATATCGAAAGCCGGGGATTTTCTGTTTCTGTCTACAACA 100
|||||||.|.||.|||||||||||||||||||||||.|||||.|||||||
RBAM_022170__ 51 TCTGGCTCTTAACATCGAAAGCCGGGGATTTTCTGTGTCTGTATACAACA 100
BSNT_03550___ 101 GATCAAGCAGTAAAACTGAGAAGTTTTTACAGGAGGCAAAAGGAAAAAAT 150
||||||||||.|||||.||..||||||||.|.|||||||||||.||||||
RBAM_022170__ 101 GATCAAGCAGCAAAACGGAAGAGTTTTTAGAAGAGGCAAAAGGCAAAAAT 150
BSNT_03550___ 151 GTTGTTGGCACATACAGCATTGAAGAATTTGTCCAATC-CTTGGAAACAC 199
|||||.||.||||||||||||||.||.||||||||.|| ||| |||||||
RBAM_022170__ 151 GTTGTCGGTACATACAGCATTGAGGAGTTTGTCCAGTCTCTT-GAAACAC 199
BSNT_03550___ 200 CGCGCAAAATCTTATTAATGGTTAAAGCGGGAACTGCAACAGATGCGACA 249
|.||.|||||.|||||||||||||||||||||||||||||.||||||||.
RBAM_022170__ 200 CCCGTAAAATTTTATTAATGGTTAAAGCGGGAACTGCAACGGATGCGACG 249
BSNT_03550___ 250 ATTCAATCTCTTCTTCCTCATCTAGAGAAGGATGATATTTTAATTGACGG 299
|||||||||||||||||||||||.||.||.||.||||||||.||||||||
RBAM_022170__ 250 ATTCAATCTCTTCTTCCTCATCTGGAAAAAGACGATATTTTGATTGACGG 299
BSNT_03550___ 300 CGGTAATACATACTATAAAGATACACAGCGCCGTAACAAAGAACTCGCTG 349
|||.|||||||||||||||||||||||||||||.||||||||.||.||.|
RBAM_022170__ 300 CGGAAATACATACTATAAAGATACACAGCGCCGGAACAAAGAGCTTGCCG 349
BSNT_03550___ 350 AAAGCGGCATTCATTTTATCGGAACAGGTGTTTCCGGCGGAGAAGAAGGG 399
|||||||||||||.|||||||||||.|||||.||.|||||.|||||.||.
RBAM_022170__ 350 AAAGCGGCATTCACTTTATCGGAACGGGTGTATCAGGCGGTGAAGAGGGA 399
BSNT_03550___ 400 GCACTTAAAGGGCCTTCTATTATGCCTGGCGGACAAAAAGAAGCACATGA 449
||.||.||||||||||||||||||||.|||||.|||||.|||||.||.||
RBAM_022170__ 400 GCGCTGAAAGGGCCTTCTATTATGCCGGGCGGCCAAAAGGAAGCGCACGA 449
BSNT_03550___ 450 GCTTGTAAAACCGATTCTTGAAGCCATTTCTGCAAAAGTTGACGGAGAAC 499
.||.||.|||||||||||.||||||||||||||.|||||.|||||||||.
RBAM_022170__ 450 ACTCGTGAAACCGATTCTAGAAGCCATTTCTGCTAAAGTGGACGGAGAAG 499
BSNT_03550___ 500 CTTGTACGACATATATCGGTCCGGACGGCGCCGGCCATTACGTAAAAATG 549
|||||||||||||.|||||.||||||||.||.||.||.||.|||||||||
RBAM_022170__ 500 CTTGTACGACATACATCGGCCCGGACGGAGCGGGGCACTATGTAAAAATG 549
BSNT_03550___ 550 GTGCACAACGGAATTGAATACGGAGATATGCAGCTGATCTCTGAATCATA 599
|||||||||||.||.||||||||.||.|||||||||||||||||.|||||
RBAM_022170__ 550 GTGCACAACGGTATCGAATACGGTGACATGCAGCTGATCTCTGAGTCATA 599
BSNT_03550___ 600 TTTCATTCTGAAACAGGTGCTGGGCCTTTCTGCTGATGAGCTTCATGAAG 649
|||||||.|||||||||||||.||..|.|||||.||.||||||||.||||
RBAM_022170__ 600 TTTCATTTTGAAACAGGTGCTCGGATTGTCTGCCGAAGAGCTTCACGAAG 649
BSNT_03550___ 650 TTTTCGCTGAATGGAATAAAGGTGAGCTTGATAGCTACCTGATTGAGATT 699
|.||||||||.|||||.|||||.||||||||.|||||.|||||.||.||.
RBAM_022170__ 650 TATTCGCTGAGTGGAACAAAGGAGAGCTTGACAGCTATCTGATCGAAATC 699
BSNT_03550___ 700 ACGGCTGACATCTTCACAAAAAAAGACGAAGAGACAGGCAAGCCGCTTGT 749
|||||||||||.|||||.||||||||.|||||.||.|||||.||||||||
RBAM_022170__ 700 ACGGCTGACATTTTCACTAAAAAAGATGAAGAAACGGGCAAACCGCTTGT 749
BSNT_03550___ 750 TGATGTGATTCTTGATAAAGCAGGGCAAAAAGGAACAGGAAAATGGACAA 799
|||.|||||.||||||||||||||.|||||||||||.||.||.|||||||
RBAM_022170__ 750 TGACGTGATCCTTGATAAAGCAGGCCAAAAAGGAACGGGTAAGTGGACAA 799
BSNT_03550___ 800 GCCAAAGCGCACTTGACTTAGGCGTTCCGCTTCCGATTATTACTGAATCT 849
||||||||||.||||||||||||||.||||||||||||||.|||||||||
RBAM_022170__ 800 GCCAAAGCGCTCTTGACTTAGGCGTGCCGCTTCCGATTATCACTGAATCT 849
BSNT_03550___ 850 GTATTCGCACGCTTTATCTCAGCTATGAAGGAAGAGCGTGTGAAAGCGAG 899
||.||.||.||.||.||.||.||.|||||.|||||||||||||||||.||
RBAM_022170__ 850 GTTTTTGCGCGTTTCATTTCCGCAATGAAAGAAGAGCGTGTGAAAGCAAG 899
BSNT_03550___ 900 CGGACTTCTTTCAGGACCAGAAGTGAAGCCTGTTACAGAAAATAAAGAAG 949
|.|.|||||.||.||.|||||.||.|||||.||.||.|||||||||||||
RBAM_022170__ 900 CAGCCTTCTGTCCGGGCCAGACGTTAAGCCGGTCACTGAAAATAAAGAAG 949
BSNT_03550___ 950 AGCTGATTGAAGCGGTCAGAAAAGCGTTGTTCATGAGTAAAATCTGTTCA 999
||||||||||||||||||||||||||.|.||||||||||||||||||||.
RBAM_022170__ 950 AGCTGATTGAAGCGGTCAGAAAAGCGCTCTTCATGAGTAAAATCTGTTCT 999
BSNT_03550___ 1000 TACGCGCAAGGATTTGCCCAAATGAAAGCTGCTTCTGAAGAATACAACTG 1049
|||||.|||||.||.||||||||||||||.||.|||||||||||.|||||
RBAM_022170__ 1000 TACGCACAAGGCTTCGCCCAAATGAAAGCCGCGTCTGAAGAATATAACTG 1049
BSNT_03550___ 1050 GGATCTGAAATATGGTGAAATCGCTATGATCTTCCGCGGTGGTTGCATCA 1099
||||||||||||.|||||||||||.|||||.||||||||.||.||.||||
RBAM_022170__ 1050 GGATCTGAAATACGGTGAAATCGCGATGATTTTCCGCGGCGGCTGTATCA 1099
BSNT_03550___ 1100 TTCGCGCGGCATTCCTTCAGAAGATCAAAGAAGCTTACGATCGCGAGCCT 1149
|.||||||||.|||||.||.|||||||||||.||.||.||.||.||.||.
RBAM_022170__ 1100 TCCGCGCGGCGTTCCTGCAAAAGATCAAAGACGCATATGACCGTGAACCG 1149
BSNT_03550___ 1150 GAGCTTGACAACCTGCTTCTTGACAGCTATTTCAAGAATATTGTAGAAAG 1199
|||||||||||||||||..|.||||||||.|||||.||.||||.||||||
RBAM_022170__ 1150 GAGCTTGACAACCTGCTGTTAGACAGCTACTTCAAAAACATTGCAGAAAG 1199
BSNT_03550___ 1200 CTATCAAGGAGCGCTTCGCCAAGTGATTTCACTTGCAGTTGCCCAAGGTG 1249
|||.|||||.||.|||||||||||||||||||||||.||.||||||||.|
RBAM_022170__ 1200 CTACCAAGGCGCCCTTCGCCAAGTGATTTCACTTGCCGTAGCCCAAGGCG 1249
BSNT_03550___ 1250 TGCCGGTGCCATCATTCTCAAGCGCATTAGCCTACTATGACAGCTACCGC 1299
|||||||.||.||.||||||||||||.|.||.||.||.|||||||||||.
RBAM_022170__ 1250 TGCCGGTACCTTCGTTCTCAAGCGCACTTGCGTATTACGACAGCTACCGT 1299
BSNT_03550___ 1300 ACAGCCGTACTGCCTGCAAACTTAATCCAAGCACAGCGCGACTACTTTGG 1349
||.||.||.||.|||||||||||.||.|||||.|||||.||.|||||.||
RBAM_022170__ 1300 ACGGCAGTGCTTCCTGCAAACTTGATTCAAGCGCAGCGTGATTACTTCGG 1349
BSNT_03550___ 1350 CGCTCATACGTATGAGCGTACTGACAAAGAAGGCATCTTCCATACTGAAT 1399
|||.|||||||||||.||.||.||.|||||||||||.|||||||||||||
RBAM_022170__ 1350 CGCGCATACGTATGAACGCACAGATAAAGAAGGCATTTTCCATACTGAAT 1399
BSNT_03550___ 1400 GGATGAAGTAA 1410
|||||||||||
RBAM_022170__ 1400 GGATGAAGTAA 1410
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.