Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03547 and RBAM_022150

See Amino acid alignment / Visit BSNT_03547 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:48
# Commandline: needle
#    -asequence dna-align/BSNT_03547___rnz.1.9828.seq
#    -bsequence dna-align/RBAM_022150___rnz.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03547___rnz-RBAM_022150___rnz.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03547___rnz-RBAM_022150___rnz.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03547___rnz
# 2: RBAM_022150___rnz
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 949
# Identity:     703/949 (74.1%)
# Similarity:   703/949 (74.1%)
# Gaps:          47/949 ( 5.0%)
# Score: 2553.5
# 
#
#=======================================

BSNT_03547___      1 GTGGAATTACTTTTTTTAGGGACGGGAGCCGGCATCCCCGCCAAGGCGAG     50
                     |||||||||.|.||||||||||||||.||||||||.||.||.|||.||||
RBAM_022150__      1 GTGGAATTATTATTTTTAGGGACGGGGGCCGGCATGCCGGCAAAGACGAG     50

BSNT_03547___     51 AAACGTCACCTCTGTAGCATTGAAATTGCTTGAAGAAAGGCGTTCGGTAT    100
                     ||||||.||.||.||.||..||||..|.|||||||||||||||||.||||
RBAM_022150__     51 AAACGTAACGTCCGTCGCGCTGAAGCTTCTTGAAGAAAGGCGTTCCGTAT    100

BSNT_03547___    101 GGCTTTTTGACTGCGGGGAAGCCACACAGCATCAAATTTTACATACAACG    150
                     ||||.|||||.|||||.||||||||.||||||||.||.|||||||||||.
RBAM_022150__    101 GGCTGTTTGATTGCGGAGAAGCCACTCAGCATCAGATATTACATACAACA    150

BSNT_03547___    151 ATTAAACCTCGTAAAATAGAGAAAATCTTTATTACACACATGCACGGCGA    200
                     ||.|||||..|.|||||.|||||.||.||.||.||.|||.|.||||||||
RBAM_022150__    151 ATCAAACCGAGGAAAATTGAGAAGATTTTCATCACCCACCTTCACGGCGA    200

BSNT_03547___    201 TCATGTATACGGACTTCCGGGGCTTCTGGGGAGCCGTTCCTTTCAAGGCG    250
                     .|||||.|||||.||||||||.||..|||||||||||||.|||||.||||
RBAM_022150__    201 CCATGTTTACGGTCTTCCGGGTCTGTTGGGGAGCCGTTCATTTCAGGGCG    250

BSNT_03547___    251 GAGAGGACGAGCTGACAGTGTACGGACCTAAAGGGATCAAGGCGTTTATT    300
                     |.||.||.||||||||..|.|||||.||.|||||.||.||.||.|||||.
RBAM_022150__    251 GTGAAGAAGAGCTGACGATTTACGGGCCAAAAGGCATTAAAGCCTTTATC    300

BSNT_03547___    301 GAAACAAGCCTTGCCGTCACGAAAACCCATTTGACATATCCGCTTGCGAT    350
                     |||||||||||...|||.|||...||.|||.||||.|||||.|||.|..|
RBAM_022150__    301 GAAACAAGCCTGAACGTGACGGCGACTCATCTGACGTATCCTCTTACCGT    350

BSNT_03547___    351 CCAGGAAATTGAAGAAGGAATCGTGTTTGAGGACGATCAGTTTATTGTCA    400
                     .||.|||||.|||||.||.|..||.|||||.||.||.||.||.|||||.|
RBAM_022150__    351 ACATGAAATCGAAGAGGGGACGGTTTTTGAAGATGAGCAATTCATTGTTA    400

BSNT_03547___    401 CAGCGGTATCTGTTATTCATGGAGTGGAAGCCTTCGGGTACCGTGTGCAG    450
                     |.||.|.|||.||.|||||.||.||||||||.|||||.|||||.||.|||
RBAM_022150__    401 CCGCAGCATCCGTCATTCACGGCGTGGAAGCGTTCGGCTACCGGGTTCAG    450

BSNT_03547___    451 GAAAAAGACGTACCGGGTTCCTTGAAGGCTGACGTATTAAAAGAAATGAA    500
                     |||||.||..|.||.||..|.|||.||||.|.|..|||||||||||||||
RBAM_022150__    451 GAAAAGGATATTCCCGGCGCATTGCAGGCCGGCAGATTAAAAGAAATGAA    500

BSNT_03547___    501 CATCCCGCCCGGACCTGTATATCAGAAAATCAAAAAAGGCGAAACGGTAA    550
                     .||||||||||||||.||.|||||||||||||||||||||||||||||.|
RBAM_022150__    501 TATCCCGCCCGGACCCGTCTATCAGAAAATCAAAAAAGGCGAAACGGTCA    550

BSNT_03547___    551 CGCTTGAAGACGGACGAATCATCAATGGGAATGATTTTCTGGAGCCTCC-    599
                     |.|||||.||.||..|||||||.||.|||...||||||.||||.||.|| 
RBAM_022150__    551 CACTTGACGATGGCAGAATCATTAACGGGCGGGATTTTTTGGAACCCCCG    600

BSNT_03547___    600 TAAAAAGGGAAGATCTGTTGTGTTCTCCGGTGATACGAGAG--TAAGTGA    647
                     .|||||||||..||| ||.|..||.|||||.||||||||.|  |.||   
RBAM_022150__    601 AAAAAAGGGAGAATC-GTCGCTTTTTCCGGGGATACGAGGGCATCAG---    646

BSNT_03547___    648 CAAAC---TAAAAGAGCTTGCGAGGGATTGTGATGTGCTTGTTCATGAAG    694
                       |.|   |||..|||||.|||.|..||...|||||||||||||||||||
RBAM_022150__    647 --AGCGGGTAACGGAGCTGGCGCGCAATGCGGATGTGCTTGTTCATGAAG    694

BSNT_03547___    695 CAACCTTTGCTAAGGAAGACCGTAAA-CTTGCTTATGATTATTATCACAG    743
                     ||||.|||||.|||||||| .|.||| ||.||..||.|||||||||||..
RBAM_022150__    695 CAACATTTGCAAAGGAAGA-TGCAAAGCTCGCACATAATTATTATCACGC    743

BSNT_03547___    744 TACAACGGAACAAGCGGCTGTAACAGCGAAAGAAGCAAGAGCGAAGCAGC    793
                     .||.||.|||||.||.||...|||.||.|||.|||||.|.||.||.||||
RBAM_022150__    744 GACGACAGAACAGGCTGCGCAAACGGCAAAAAAAGCAGGCGCCAAACAGC    793

BSNT_03547___    794 TCATTTTAACCCATATCAGCGCAAGATATCAGGGAGATGCTTCTTTGGAG    843
                     |.||.|||||.||||||||||||||.||||||||.||..|..|..|.|||
RBAM_022150__    794 TGATCTTAACTCATATCAGCGCAAGGTATCAGGGTGAATCGCCGATAGAG    843

BSNT_03547___    844 CTTC---AAAAAG------AAGCGG---TTGA----CGTTTTCCCCAATA    877
                     |.||   ||.|.|      ||||||   ||||    .||       ||.|
RBAM_022150__    844 CGTCTCGAACATGAGGCGAAAGCGGTATTTGAAAACAGT-------AAGA    886

BSNT_03547___    878 GCGTGGCGGCATATGATTTCTTAGAGGTAAACGTCCCGCGAGG-CTGA-    924
                     .|      ||||.|||.|||.|.|||||.|..||  .|.|||| ||.| 
RBAM_022150__    887 TC------GCATTTGACTTCATGGAGGTCACTGT--GGAGAGGTCTTAA    927


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