Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03546 and GA1
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:48
# Commandline: needle
# -asequence dna-align/BSNT_03546___rpmGA1.1.9828.seq
# -bsequence dna-align/RBAM_022140___rpmG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03546___rpmGA1-RBAM_022140___rpmG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03546___rpmGA1-RBAM_022140___rpmG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03546___rpmGA1
# 2: RBAM_022140___rpmG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 150
# Identity: 113/150 (75.3%)
# Similarity: 113/150 (75.3%)
# Gaps: 0/150 ( 0.0%)
# Score: 417.0
#
#
#=======================================
BSNT_03546___ 1 ATGAGAGTAAATGTTACTTTAGCCTGCACTGAAACGGGAGACCGAAATTA 50
|||.|.||.||||||||.||.|||||.||.||.||.||.|||.|||||||
RBAM_022140__ 1 ATGCGTGTGAATGTTACATTGGCCTGTACAGAGACAGGGGACAGAAATTA 50
BSNT_03546___ 51 CATCACAACAAAAAATAAACGCACCAATCCAGACCGTTTGGAGCTGAAAA 100
.||.||.||.||.||.|||||.||.|||||.|||||.||.||..||||||
RBAM_022140__ 51 TATTACGACGAAGAACAAACGGACGAATCCGGACCGGTTAGAAATGAAAA 100
BSNT_03546___ 101 AATATTCACCGCGTTTAAAGAAATATACCCTTCACCGTGAAACAAAATAA 150
|.|||||.||.||.||.||.||.|||||..|.||.|||||.||||||||.
RBAM_022140__ 101 AGTATTCCCCCCGGTTGAAAAAGTATACGTTGCATCGTGAGACAAAATAG 150
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