Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03507 and RBAM_021700
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:45
# Commandline: needle
# -asequence dna-align/BSNT_03507___aspA.1.9828.seq
# -bsequence dna-align/RBAM_021700___aspA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03507___aspA-RBAM_021700___aspA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03507___aspA-RBAM_021700___aspA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03507___aspA
# 2: RBAM_021700___aspA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1433
# Identity: 1157/1433 (80.7%)
# Similarity: 1157/1433 (80.7%)
# Gaps: 10/1433 ( 0.7%)
# Score: 4687.5
#
#
#=======================================
BSNT_03507___ 1 ATGTTAAACGGCCAAAAAGAATATCGCGTGGAAAAAGACTTCCTTGGGGA 50
|||..|||||..||||||||||||||...|||||||||.|||||.||.||
RBAM_021700__ 1 ATGACAAACGCGCAAAAAGAATATCGTCAGGAAAAAGATTTCCTCGGAGA 50
BSNT_03507___ 51 AAAACAAATTGAAGCAGATGTTTATTACGGAATTCAGACGCTCCGTGCTT 100
|||||||||||||||.|||||.|||||||||||.||.|||||.||.||..
RBAM_021700__ 51 AAAACAAATTGAAGCTGATGTGTATTACGGAATACAAACGCTGCGCGCGA 100
BSNT_03507___ 101 CTGAAAATTTCCCGATCACAGGATACAAAATCCATGAGGAAATGATTAAC 150
..|||||.||.|||||.||.||.|||...|||||.||.|||||||||||.
RBAM_021700__ 101 AAGAAAACTTTCCGATTACCGGCTACCGCATCCACGAAGAAATGATTAAT 150
BSNT_03507___ 151 GCACTGGCGATTGTGAAAAAAGCTGCGGCTCTTGCCAACATGGACGTGAA 200
||.||.||.||.||.||||||||.|||||.||||||||||||||.||.||
RBAM_021700__ 151 GCGCTCGCCATCGTCAAAAAAGCGGCGGCGCTTGCCAACATGGATGTAAA 200
BSNT_03507___ 201 ACGGCTGTATGAAGGAATTGGCCAAGCTATCGTACAAGCCGCTGACGAGA 250
||||||||||||||||||.||..|.||.||.|||||.|||||.||.||.|
RBAM_021700__ 201 ACGGCTGTATGAAGGAATCGGAAATGCGATTGTACAGGCCGCAGATGAAA 250
BSNT_03507___ 251 TTCTGGAAGGCAAGTGGCACGATCAGTTTATCGTCGATCCGATTCAGGGC 300
||||.||.||.||.|||||.||.||.|||||||||||||||||.||.||.
RBAM_021700__ 251 TTCTTGAGGGAAAATGGCATGACCAATTTATCGTCGATCCGATCCAAGGG 300
BSNT_03507___ 301 GGTGCCGGAACTTCTATGAACATGAACGCGAATGAGGTTATCGGAAACCG 350
||.||||||||.||.|||||||||||.||.||.||.||.|||||.|||.|
RBAM_021700__ 301 GGAGCCGGAACGTCCATGAACATGAATGCCAACGAAGTAATCGGCAACAG 350
BSNT_03507___ 351 GGCGCTTGAAATCATGGGACATAAAAAGGGAGATTATATCCATTTAAGTC 400
|||.||||||||||||||.||||||||.||.||.||.||.||..|.||.|
RBAM_021700__ 351 GGCTCTTGAAATCATGGGGCATAAAAAAGGTGAATACATTCACCTCAGCC 400
BSNT_03507___ 401 CAAACACACATGTGAACATGTCACAGTCTACGAACGATGTGTTCCCGACT 450
|.||||||||.||.|||||||||||.||.||||||||.|||||||||||.
RBAM_021700__ 401 CGAACACACACGTCAACATGTCACAATCGACGAACGACGTGTTCCCGACG 450
BSNT_03507___ 451 GCTATCCATATTTCCACATTGAAGCTCTTAGAAAAACTGCTGAAAACAAT 500
||.|||||||||||.||.|||||.||.||.||.||.||.||..|.||.||
RBAM_021700__ 451 GCAATCCATATTTCAACCTTGAAACTTTTGGATAAGCTCCTTGATACGAT 500
BSNT_03507___ 501 GGAAGATATGCATAGTGTGTTTAAGCAAAAAGCACAGGAGTTTGACTCTG 550
||...||||||..|||||.|||||..|.|||||..|..|.|||||.||||
RBAM_021700__ 501 GGCGCATATGCTCAGTGTCTTTAAAGATAAAGCGAAACAATTTGATTCTG 550
BSNT_03507___ 551 TTATTAAAATGGGCCGGACACACCTTCAAGATGCGGTTCCCATCCGTCTT 600
|.|||||||||||.||.|||||||||||.||.||.||.||.||||||||.
RBAM_021700__ 551 TCATTAAAATGGGGCGCACACACCTTCAGGACGCTGTGCCGATCCGTCTC 600
BSNT_03507___ 601 GGCCAGGAATTCGAAGCTTACAGCCGTGTTCTCGAGCGTGATATCAAACG 650
||.||||||||.|||||.||||||||.||.||.||||||||.||.||.||
RBAM_021700__ 601 GGACAGGAATTTGAAGCATACAGCCGCGTGCTTGAGCGTGACATAAAGCG 650
BSNT_03507___ 651 AATCAAGCAATCGCGCCAGCACCTATATGAAGTCAACATGGGCGCAACTG 700
|||.||.|||||.||||||||.||.||||||||.||||||||.|||||.|
RBAM_021700__ 651 AATTAAACAATCCCGCCAGCATCTGTATGAAGTAAACATGGGGGCAACGG 700
BSNT_03507___ 701 CTGTTGGTACAGGGCTGAACGCTGATCCTGAATATATCAAACAGGTAGTA 750
|.||.|||||.||.||.|||||.|||||....||.||..|||||||.||.
RBAM_021700__ 701 CCGTAGGTACGGGACTTAACGCCGATCCGCGCTACATAGAACAGGTTGTG 750
BSNT_03507___ 751 AAGCACCTTGCTGATATTAGCGGGCTTCCTCTTGTCGGCGCTGATCATCT 800
||||||||.|||||.||.|||||.||.||.|||||||||||.|..|||.|
RBAM_021700__ 751 AAGCACCTGGCTGACATCAGCGGACTGCCGCTTGTCGGCGCCGGCCATTT 800
BSNT_03507___ 801 TGTTGATGCGACACAAAATACAGATGCCTATACAGAGGTATCAGCTTCAT 850
.|||||.||.||||||||.||.|||||.|||||.||.||.|||||..|.|
RBAM_021700__ 801 GGTTGACGCCACACAAAACACTGATGCGTATACGGAAGTTTCAGCCGCGT 850
BSNT_03507___ 851 TAAAAGTCTGCATGATGAACATGTCGAAGATCGCAAACGACCTGCGCTTA 900
|.|||||.|||||||||||||||||.||.|||||.|||||.|||||||||
RBAM_021700__ 851 TGAAAGTATGCATGATGAACATGTCTAAAATCGCCAACGATCTGCGCTTA 900
BSNT_03507___ 901 ATGGCGTCGGGACCGCGCGCCGGACTTGCGGAAATTTCTCTGCCTGCACG 950
|||||.||.||.||||||||.|||||||||||||||||.|||||.||.||
RBAM_021700__ 901 ATGGCTTCAGGTCCGCGCGCGGGACTTGCGGAAATTTCACTGCCCGCCCG 950
BSNT_03507___ 951 TCAGCCGGGCTCATCTATTATGCCGGGGAAAGTCAATCCGGTTATGGCGG 1000
|||||||||.|||||.||||||||.|||||||||||.||.||.|||||.|
RBAM_021700__ 951 TCAGCCGGGATCATCCATTATGCCTGGGAAAGTCAACCCTGTAATGGCAG 1000
BSNT_03507___ 1001 AGCTGATCAACCAAATTGCGTTCCAGGTTATCGGAAACGACAATACAATC 1050
||||||||||||||||.||.||||||||.|||||.||.||||||||.|||
RBAM_021700__ 1001 AGCTGATCAACCAAATCGCCTTCCAGGTCATCGGGAATGACAATACGATC 1050
BSNT_03507___ 1051 TGCCTTGCTTCAGAAGCCGGCCAGCTTGAGTTGAACGTCATGGAGCCCGT 1100
|||||.|||||||||||.||||||||.|||.|.|||||.||||||||.||
RBAM_021700__ 1051 TGCCTCGCTTCAGAAGCGGGCCAGCTGGAGCTTAACGTAATGGAGCCGGT 1100
BSNT_03507___ 1101 GCTTGTCTTTAATTTGCTTCAATCCATCAGCATCATGAACAACGGCTTCC 1150
.||.||.|||||..|||||||||||||||||||||||||.|||||.||||
RBAM_021700__ 1101 ACTCGTATTTAACCTGCTTCAATCCATCAGCATCATGAATAACGGGTTCC 1150
BSNT_03507___ 1151 GTTCGTTCACTGATCATTG-CTTAAAAGGC----ATCGAAGCCAACGAAA 1195
||||.||.||.|||||||| || ||| ||.|||||.|||||||
RBAM_021700__ 1151 GTTCATTTACCGATCATTGTCT-----GGCGGGAATTGAAGCGAACGAAA 1195
BSNT_03507___ 1196 AGCGGTTGAAGCAATATGTAGAAAAAAGCGCTGGAGTGATCACTGCAGTC 1245
|.||..||||||||||.||.||||||||||..||.||.||.||.||.|||
RBAM_021700__ 1196 AACGTCTGAAGCAATACGTGGAAAAAAGCGTCGGCGTCATTACGGCGGTC 1245
BSNT_03507___ 1246 AATCCGCATCTTGGGTATGAAGCGGCAGCTAGAATTGCCAGGGAAGCAAT 1295
||||||||.||.||||||||||||||.||..|||||||..|.||||||||
RBAM_021700__ 1246 AATCCGCACCTCGGGTATGAAGCGGCTGCGCGAATTGCACGTGAAGCAAT 1295
BSNT_03507___ 1296 TATGACAGGGCAATCTGTCCGGGATCTTTGTCTGCAGCATGATGTGCTGA 1345
.|||||||||||||||||..|.||||||||.||.||..|||||||.||||
RBAM_021700__ 1296 CATGACAGGGCAATCTGTAAGAGATCTTTGCCTTCAAAATGATGTACTGA 1345
BSNT_03507___ 1346 CTGAAGAAGAATTGGATATTATTTTAAACCCATATGAGATGACCAAACCA 1395
|.|||||||||||||||||.|||||.||.||.|||||.|||||.|||||.
RBAM_021700__ 1346 CAGAAGAAGAATTGGATATCATTTTGAATCCGTATGAAATGACAAAACCG 1395
BSNT_03507___ 1396 GGTATCGCAGGGAAAGAACTATTAGAAAAATAA 1428
||.||.||.||.|||||.|||||||||||||||
RBAM_021700__ 1396 GGGATTGCCGGAAAAGATCTATTAGAAAAATAA 1428
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