Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03491 and RBAM_021580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:44
# Commandline: needle
# -asequence dna-align/BSNT_03491___spoIIAA.1.9828.seq
# -bsequence dna-align/RBAM_021580___spoIIAA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03491___spoIIAA-RBAM_021580___spoIIAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03491___spoIIAA-RBAM_021580___spoIIAA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03491___spoIIAA
# 2: RBAM_021580___spoIIAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 354
# Identity: 282/354 (79.7%)
# Similarity: 282/354 (79.7%)
# Gaps: 0/354 ( 0.0%)
# Score: 1122.0
#
#
#=======================================
BSNT_03491___ 1 ATGAGCCTTGGAATTGACATGAATGTCAAAGAATCTGTGCTTTGTATTCG 50
||||||||||||||||||.|..|||||||||||||.||||||||||||||
RBAM_021580__ 1 ATGAGCCTTGGAATTGACTTTCATGTCAAAGAATCCGTGCTTTGTATTCG 50
BSNT_03491___ 51 ATTAACAGGCGAACTCGATCACCATACGGCTGAAACCCTGAAGCAAAAAG 100
|||||||||.||||||||.||.||||||||.|||.|..|.||.|||||.|
RBAM_021580__ 51 ATTAACAGGTGAACTCGACCATCATACGGCAGAATCATTAAAACAAAAGG 100
BSNT_03491___ 101 TGACTCAATCATTGGAGAAGGATGATATTCGCCATATCGTGCTGAACTTG 150
|.|||.||||..|||||...||.|..||.||.||.||||||||||||.|.
RBAM_021580__ 101 TTACTGAATCGCTGGAGGCTGACGGCATCCGTCACATCGTGCTGAACCTT 150
BSNT_03491___ 151 GAGGACCTTTCCTTTATGGACAGCTCGGGGCTTGGCGTTATTTTAGGAAG 200
||.||.|||.||||.|||||||||||.||.||.|||||.||||||||..|
RBAM_021580__ 151 GAAGATCTTACCTTCATGGACAGCTCCGGCCTCGGCGTGATTTTAGGGCG 200
BSNT_03491___ 201 ATACAAGCAAATTAAGCAAATTGGCGGGGAAATGGTCGTTTGCGCTATCT 250
.||.||.||||||||.||..|.|||||.|||||||||||.|||||.||.|
RBAM_021580__ 201 TTATAAACAAATTAAACAGCTCGGCGGAGAAATGGTCGTGTGCGCGATTT 250
BSNT_03491___ 251 CTCCTGCGGTGAAGCGATTGTTTGATATGTCGGGTCTGTTTAAAATTATC 300
|.||.|||||||..||..|||||||.|||||.||.|||||||||||.|||
RBAM_021580__ 251 CACCCGCGGTGAGACGTCTGTTTGACATGTCCGGCCTGTTTAAAATCATC 300
BSNT_03491___ 301 CGATTTGAACAATCTGAACAGCAGGCGCTCCTGACACTGGGGGTGGCATC 350
.|.||.||||||||.|||||..|.|||||..|.||..|||||||||||||
RBAM_021580__ 301 AGGTTCGAACAATCAGAACAAAAAGCGCTTTTAACGTTGGGGGTGGCATC 350
BSNT_03491___ 351 ATGA 354
||||
RBAM_021580__ 351 ATGA 354
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