Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03480 and RBAM_021490
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:43
# Commandline: needle
# -asequence dna-align/BSNT_03480___spoVAF.1.9828.seq
# -bsequence dna-align/RBAM_021490___spoVAF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03480___spoVAF-RBAM_021490___spoVAF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03480___spoVAF-RBAM_021490___spoVAF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03480___spoVAF
# 2: RBAM_021490___spoVAF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1514
# Identity: 1105/1514 (73.0%)
# Similarity: 1105/1514 (73.0%)
# Gaps: 64/1514 ( 4.2%)
# Score: 3885.0
#
#
#=======================================
BSNT_03480___ 1 ATGCCGGACCACAA--GGAAGAGAAAATTCGGGTTTATCGGAATCC-AGC 47
|||||||| |.|| ||||.|.|..||...|||.||.|||.|||| ||
RBAM_021490__ 1 ATGCCGGA--AAAACCGGAAAACATGATCAAGGTGTACCGGGATCCTAG- 47
BSNT_03480___ 48 TAAAAATGAAGAGTATTTCAAAAACCGTGTTGGGATGGGGACGAGCTATG 97
.|||||||||.|.|.|||.|||.||||.||.||.|||||.||||||||||
RBAM_021490__ 48 AAAAAATGAACAATTTTTTAAAGACCGCGTCGGTATGGGAACGAGCTATG 97
BSNT_03480___ 98 ATGTAGGTGTTCGC-AAGCTCACGA-TTTTAGATAAAGAGATCCAGCTTT 145
||||.||.||.||| |||.| ||| |.|||||....||..|||||.|||
RBAM_021490__ 98 ATGTCGGCGTCCGCAAAGTT--CGAGTATTAGACCGGGAAGTCCAGATTT 145
BSNT_03480___ 146 ACTATCTAAATGGATTATGCGATACAGTTTATATTATTCATTTAATGAGA 195
|||.|.|.||.||||||..||||||..|.|.|||.||||||||||||..|
RBAM_021490__ 146 ACTTTGTCAACGGATTAACCGATACTTTGTTTATCATTCATTTAATGGAA 195
BSNT_03480___ 196 GAGCTTGTTGCCATTAACAAT-----CG-GAAAGAAGACCCTGATG-AGC 238
.||||.||.|.|.|.||.||| || |||.| |.|||| |||
RBAM_021490__ 196 CAGCTCGTCGACGTCAATAATTATGACGAGAATG------CGGATGAAGC 239
BSNT_03480___ 239 TGGTCGACATCGTCGAAAACAGGCTGCTTAACGCCCAGGTCGAAAAAGTA 288
|.|.|||.|.||.|||||||||||..|.||....|||||..|||||||.
RBAM_021490__ 240 -GATTGACGTTGTTGAAAACAGGCTTGTCAATCAGCAGGTTCAAAAAGTC 288
BSNT_03480___ 289 AAAACCTTGGATGAAACCACCGACCAAGTGCTGTCCGGGCTCGTCGCTGT 338
|||||..|.||.|||.|.||.||.||||||||.|||||.||.||.||.||
RBAM_021490__ 289 AAAACGCTCGACGAAGCAACGGATCAAGTGCTTTCCGGACTTGTGGCGGT 338
BSNT_03480___ 339 CATTGTTGAAGGTGCAGGTTTCGCATTTATAATTGACGTCAGAAGCTATC 388
.||.|||||||..||.||.|||||.|||||..|||||||||||||.||||
RBAM_021490__ 339 TATCGTTGAAGACGCGGGCTTCGCCTTTATCGTTGACGTCAGAAGTTATC 388
BSNT_03480___ 389 CGGGCAGAAACCCGGAAGAACCTGATACGGAAAAGGTAGTCAGAGGAGCC 438
|.||..|.|..||.||||||||.||||||||||||||.|||.|.||.||.
RBAM_021490__ 389 CCGGACGCACACCTGAAGAACCGGATACGGAAAAGGTCGTCCGCGGGGCA 438
BSNT_03480___ 439 AGAGACGGATTTGTTGAAAATATCGTCGTCAATACGGCCCTTCTCAGAAG 488
||||||||.|||.||||||||||||||.|.|||||.||..|..|||||||
RBAM_021490__ 439 AGAGACGGTTTTATTGAAAATATCGTCATTAATACAGCATTGATCAGAAG 488
BSNT_03480___ 489 GCGGATCAGAGACGAGCGCCTTCGAGTCAAGATGACTAAAGTTGGTGAGC 538
.||.|||||.|||||..|.||.||.|||||.||.||.|||||.||.||||
RBAM_021490__ 489 ACGAATCAGGGACGAAAGGCTCCGCGTCAAAATTACGAAAGTCGGCGAGC 538
BSNT_03480___ 539 GGTCAAAGACGGAT-TTAAGCATTTGT-TATATAGAAGATATAGCTGATC 586
|.||.|||||.||| || ||..|||| |||||||||||.||.||.||.|
RBAM_021490__ 539 GCTCTAAGACCGATCTT--GCGATTGTGTATATAGAAGACATCGCGGACC 586
BSNT_03480___ 587 CGGATCTGGTTGAG-ATCGTAGAAAAAGAAGTTGCAT-CCATTGATGTCG 634
||||.||.| |.|| |||||.|||||.|||| ||.|| |.|||||..|.|
RBAM_021490__ 587 CGGACCTTG-TCAGCATCGTCGAAAACGAAG-TGAATGCGATTGACATTG 634
BSNT_03480___ 635 ATGGATTAACAATGGCAGACAAAACTGTCGAGGAATTCATTGTTAATCAA 684
|.|||||.||.|||||.||.|||||.||.||.||||||||.||.||.||.
RBAM_021490__ 635 ACGGATTGACGATGGCTGATAAAACGGTGGAAGAATTCATCGTCAAACAG 684
BSNT_03480___ 685 AGCTATAATCCTTTTCCGCTCGTGCGCTATACAGAAAGACCGGATGTGGC 734
.|.||.|||||.||||||.|.||..|.||.|||||..|.||||||||.||
RBAM_021490__ 685 GGTTACAATCCGTTTCCGATGGTCAGATACACAGAGCGGCCGGATGTAGC 734
BSNT_03480___ 735 CGCAAATCATGTTCTAGAAGGCCATGTTATCATTATAGTGGACACATCGC 784
.||.|||||..||.|||||||.||.||.|||||..|.||.||.||.||.|
RBAM_021490__ 735 AGCCAATCACATTTTAGAAGGGCACGTCATCATCGTCGTCGATACGTCAC 784
BSNT_03480___ 785 CGAGTGTGATCATTACCCCGACGACTTTATTTCACCATGTGCAGCATGCT 834
||||.||||||||.||.|||||.||..|||||||||||||.||||||||.
RBAM_021490__ 785 CGAGCGTGATCATAACGCCGACAACGATATTTCACCATGTTCAGCATGCG 834
BSNT_03480___ 835 GAAGAATATAGGCAGGCGCCTTCAGTCGGGACCTTTTTAAGATGGGTAAG 884
||||||||.|||||||||||||||||.||.||.||||||||||||.|.||
RBAM_021490__ 835 GAAGAATACAGGCAGGCGCCTTCAGTGGGCACATTTTTAAGATGGATCAG 884
BSNT_03480___ 885 ATTTTTCGGTATTCTTGCTTCTACTTTATTTCTTCCGATCTGGTTTCTCT 934
.||||||||||||.|||||||.||..|..|.||||||||.|||||.||||
RBAM_021490__ 885 GTTTTTCGGTATTATTGCTTCAACCGTTCTGCTTCCGATTTGGTTCCTCT 934
BSNT_03480___ 935 TTGT------------GCTTCAGCCTGACCTGCTCTCGGACAATA-TGAA 971
|||| .||||.|||||| ||.| ||.|
RBAM_021490__ 935 TTGTTCTCGAACCGTCTCTTCTGCCTGA-------------AAGATTGGA 971
BSNT_03480___ 972 ATTTATCGGTTTAAATAAAGATACGCATATCCCGATCATCCTGCAGATAT 1021
.||||||||||||||||||.|||||||.|||||||||||.|||||.||.|
RBAM_021490__ 972 TTTTATCGGTTTAAATAAAAATACGCACATCCCGATCATTCTGCAAATCT 1021
BSNT_03480___ 1022 TTTTAGCTGACTTAGGAATCGAGTTTCTCAGAATGGCTGCCATTCACACC 1071
||||.||.||.||.||.||.|||||||||||.|||||.||.||.||.||.
RBAM_021490__ 1022 TTTTGGCCGATTTGGGGATTGAGTTTCTCAGGATGGCCGCGATCCATACG 1071
BSNT_03480___ 1072 CCGACGGCTTTATCAACAGCAATGGGTTTAATTGCCGCTGTTCTGATCGG 1121
|||||.||||||||.||.||.||||||.|.|||||.||.||.||||||||
RBAM_021490__ 1072 CCGACCGCTTTATCCACCGCCATGGGTCTGATTGCGGCGGTGCTGATCGG 1121
BSNT_03480___ 1122 GGAGATTGCGATTGAGGTCGGCCTTTTTTCTCCTGAGGTGATTCTGTACG 1171
..|.||.||.||.|.|||.||.||.|||||..|.||.|||||||||||||
RBAM_021490__ 1122 TCAAATCGCCATAGCGGTGGGGCTGTTTTCAGCAGAAGTGATTCTGTACG 1171
BSNT_03480___ 1172 TCTCACTTGCGGCGATTGGAACCTTTACGACGCCCAGTTATGAATTAAGC 1221
|.||..|.||.||.||.|||.|.|||||.|||||.||.|||||..|.|||
RBAM_021490__ 1172 TATCGATCGCCGCCATCGGATCATTTACCACGCCGAGCTATGAGCTCAGC 1221
BSNT_03480___ 1222 TTGGCAAACAAAATGAGCCGTCTTGTCCTCATGATACTCGTTGCCTTATT 1271
.|.||.||.|||||||..||.||..||.|.|||.|.|||||.|||.|.||
RBAM_021490__ 1222 CTCGCCAATAAAATGATACGCCTCATCTTAATGGTGCTCGTGGCCATTTT 1271
BSNT_03480___ 1272 TCATATAAAAGGGCTCGTCATCGGATTTACAGTGCTAATTATTGCCATGG 1321
.||..|.|||||..|.||.||.||.||||||.||||..|.||....||||
RBAM_021490__ 1272 CCAAGTGAAAGGCTTTGTGATAGGTTTTACATTGCTGCTGATCATAATGG 1321
BSNT_03480___ 1322 CAAGCATCAAATCCCTTCAGACACCGTACTTATGGCCGCTGATTCCCTTT 1371
|.|..|||...||..||||.||.|||||.|||||||||.|..|.||.|||
RBAM_021490__ 1322 CGAATATCCGCTCGTTTCACACGCCGTATTTATGGCCGTTTTTACCGTTT 1371
BSNT_03480___ 1372 AACGGAAAGGCGCTGTGGCAGGTTCTTGTCCGCACAGCGAAA---CCTGG 1418
|||||.|||||||||||||||||.||.|||||.| |||.| ||.||
RBAM_021490__ 1372 AACGGCAAGGCGCTGTGGCAGGTGCTCGTCCGGA---CGACAGTGCCGGG 1418
BSNT_03480___ 1419 CGCAAAAGTAAGACCCAGTATCGTTCACCCCAAAAATCGCTTAAGGCAGC 1468
.||.|||||.|||||.||.||.||||||||.|||.|.||...|||.||||
RBAM_021490__ 1419 AGCCAAAGTCAGACCGAGCATTGTTCACCCGAAAGACCGTCAAAGACAGC 1468
BSNT_03480___ 1469 CTACCAATTCATAA 1482
|.|.|..|||||||
RBAM_021490__ 1469 CAAGCGGTTCATAA 1482
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