Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03463 and RBAM_021410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence dna-align/BSNT_03463___ribE.1.9828.seq
# -bsequence dna-align/RBAM_021410___ribE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03463___ribE-RBAM_021410___ribE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03463___ribE-RBAM_021410___ribE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03463___ribE
# 2: RBAM_021410___ribE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 655
# Identity: 490/655 (74.8%)
# Similarity: 490/655 (74.8%)
# Gaps: 14/655 ( 2.1%)
# Score: 1763.0
#
#
#=======================================
BSNT_03463___ 1 ATGTTTACAGGAATTATCGAAGAAACAGGCACAATCGAATCCATGAAAAA 50
||||||||||||||..|.||||||||||||||.|||.||.|.||.|||||
RBAM_021410__ 1 ATGTTTACAGGAATCGTTGAAGAAACAGGCACGATCCAAGCAATCAAAAA 50
BSNT_03463___ 51 AGCAGGGCATTCAATGGCCTTAACAATTAAATGC----TCAAAGATTTTA 96
..||||.|.|||.|||||.|||||.|| .|| |||||..|..||
RBAM_021410__ 51 GACAGGCCTTTCCATGGCATTAACCAT----CGCCGCTTCAAAAGTGATA 96
BSNT_03463___ 97 GAG-GATGTTCATCTTGGCGACAGCATTGCAGTGAACGGCATTTGTTTGA 145
|| |||||..|.|||||||||||||||||.||.||||||||.||..|||
RBAM_021410__ 97 -AGTGATGTGAAACTTGGCGACAGCATTGCGGTAAACGGCATCTGCCTGA 145
BSNT_03463___ 146 CGGTCA-CTGATTTTACAAAAAATCAATTCACAGTGGATGTTATGCCTGA 194
|.||.| |.|||||| |..|.||||||||.||.||.|||||.|||||.||
RBAM_021410__ 146 CCGTAACCGGATTTT-CTGACAATCAATTTACGGTTGATGTCATGCCGGA 194
BSNT_03463___ 195 AACAGTCAAAGCTACGTCACTGAATGATTTAACAAAAGGAAGCAAAGTAA 244
||||||.|||||.||.||.|||||.|..||..|||||||.||.|||||||
RBAM_021410__ 195 AACAGTGAAAGCCACTTCGCTGAACGGCTTGTCAAAAGGCAGTAAAGTAA 244
BSNT_03463___ 245 ATCTGGAAAGAGCGATGGCGGCAAACGGCCGTTTCGGAGGCCATTTCGTC 294
|.|||||||||||||||.|.||.|||||.||.|||||.|||||.||.||.
RBAM_021410__ 245 ACCTGGAAAGAGCGATGTCCGCCAACGGACGGTTCGGCGGCCACTTTGTA 294
BSNT_03463___ 295 TCAGGCCATGTCGACGGAACTGCGGAAATCACACGAATTGAAGAGAAAAG 344
|||||.|||||.||||||||.||||||||.||.||.||.||..|.|||||
RBAM_021410__ 295 TCAGGGCATGTGGACGGAACGGCGGAAATTACGCGGATCGAGAAAAAAAG 344
BSNT_03463___ 345 CAACGCAGTTTACTATGATTTAAAAATGGACCCGTCATTAACAAAAACAT 394
||||||.||.||.||.||.||||||.|....|||..|||.||||||||..
RBAM_021410__ 345 CAACGCGGTCTATTACGACTTAAAACTTTCGCCGGAATTGACAAAAACGC 394
BSNT_03463___ 395 TGGTTTTAAAGGGATCAATTACTGTGGATGGCGTGAGCTTAACCATATTC 444
|.||.||.||.||.||||||||.||.||.|||||||||.|.||.||.|||
RBAM_021410__ 395 TCGTATTGAAAGGTTCAATTACGGTAGACGGCGTGAGCCTGACGATTTTC 444
BSNT_03463___ 445 GGCCTGACAGAAGACACAGTGACGATCTCCTTAATACCGCATACGATCAG 494
||..|..||||.||.|..||.|||.|.|||.|.||.||||||||.|||..
RBAM_021410__ 445 GGTTTATCAGACGAAAGCGTAACGGTATCCATCATTCCGCATACCATCTC 494
BSNT_03463___ 495 CGAAACGATCTTTTCAGA-AAAAACGATCGGCTCTAAAGTGAATATCGAA 543
.|||||||| |||||||| .|||||..||||.||.|..||.|||||.||.
RBAM_021410__ 495 AGAAACGAT-TTTTCAGACGAAAACAGTCGGATCGACCGTAAATATTGAG 543
BSNT_03463___ 544 TGCGATATGATCGGAAAATATATGTATCGATTTTTGCATAAAGCCAATGA 593
||.||.||||||||.|||||..|.||.||.||||||||.|||.|..|..|
RBAM_021410__ 544 TGTGACATGATCGGGAAATACTTATACCGCTTTTTGCACAAAACAGAACA 593
BSNT_03463___ 594 AAATAAGACCCAACAAACCATTACAAAAGCCTTCTTAAGCGAAAACGGCT 643
||..||.|.|.|.|||||.||.||..|||||||.||||||||.|||||||
RBAM_021410__ 594 AACGAAAAGCAATCAAACTATCACGGAAGCCTTTTTAAGCGAGAACGGCT 643
BSNT_03463___ 644 TTTAG 648
|||||
RBAM_021410__ 644 TTTAG 648
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